RNA–Protein interactions for RNA: ENST00000468777.5

PCCB-208, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene PCCB, Length 1,877 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-208ENST00000468777 GALNT17Q6IS24 598 aa21.77■■□□□ 1.08
PCCB-208ENST00000468777 DIS3L2Q8IYB7 885 aaKnown RBP21.77■■□□□ 1.08
PCCB-208ENST00000468777 KIF3AQ9Y496 699 aa21.77■■□□□ 1.08
PCCB-208ENST00000468777 KIAA1217Q5T5P2 1943 aa21.77■■□□□ 1.08
PCCB-208ENST00000468777 LOC102724159A0A0B4J2E5 919 aa21.77■■□□□ 1.08
PCCB-208ENST00000468777 KRT2P35908 639 aa21.77■■□□□ 1.08
PCCB-208ENST00000468777 PWP2Q15269 919 aaKnown RBP21.77■■□□□ 1.08
PCCB-208ENST00000468777 ANO1Q5XXA6 986 aa21.77■■□□□ 1.08
PCCB-208ENST00000468777 VSIG10LQ86VR7 867 aa21.77■■□□□ 1.08
PCCB-208ENST00000468777 RTEL1Q9NZ71 1219 aa21.77■■□□□ 1.08
PCCB-208ENST00000468777 KIAA0100Q14667 2235 aaKnown RBP21.77■■□□□ 1.08
PCCB-208ENST00000468777 B4DLN1 442 aa21.76■■□□□ 1.07
PCCB-208ENST00000468777 CCL5P13501 91 aa21.76■■□□□ 1.07
PCCB-208ENST00000468777 CCND2P30279 289 aa21.76■■□□□ 1.07
PCCB-208ENST00000468777 EARS2Q5JPH6 523 aaKnown RBP21.76■■□□□ 1.07
PCCB-208ENST00000468777 TMEM63BQ5T3F8 832 aa21.76■■□□□ 1.07
PCCB-208ENST00000468777 TEX2Q8IWB9 1127 aa21.76■■□□□ 1.07
PCCB-208ENST00000468777 LENG1Q96BZ8 264 aaPredicted RBP21.76■■□□□ 1.07
PCCB-208ENST00000468777 RNF208Q9H0X6 261 aa21.76■■□□□ 1.07
PCCB-208ENST00000468777 HMX1Q9NP08 348 aaPredicted RBP21.76■■□□□ 1.07
PCCB-208ENST00000468777 FAM205CA6NFA0 338 aa21.75■■□□□ 1.07
PCCB-208ENST00000468777 PTGS1P23219 599 aa21.75■■□□□ 1.07
PCCB-208ENST00000468777 CCDC144BQ3MJ40 725 aa21.75■■□□□ 1.07
PCCB-208ENST00000468777 PCNX4Q63HM2 1172 aa21.75■■□□□ 1.07
PCCB-208ENST00000468777 LARP1BQ659C4 914 aaKnown RBP21.75■■□□□ 1.07
PCCB-208ENST00000468777 TAPT1Q6NXT6 567 aa21.75■■□□□ 1.07
PCCB-208ENST00000468777 SEPT14Q6ZU15 432 aa21.75■■□□□ 1.07
PCCB-208ENST00000468777 TNS4Q8IZW8 715 aa21.75■■□□□ 1.07
PCCB-208ENST00000468777 BRMS1Q9HCU9 246 aa21.75■■□□□ 1.07
PCCB-208ENST00000468777 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.75■■□□□ 1.07
PCCB-208ENST00000468777 ADCY6O43306 1168 aa21.75■■□□□ 1.07
PCCB-208ENST00000468777 RGS20O76081 388 aa21.75■■□□□ 1.07
PCCB-208ENST00000468777 SREBF1P36956 1147 aa21.75■■□□□ 1.07
PCCB-208ENST00000468777 ADCYAP1R1P41586 468 aa21.75■■□□□ 1.07
PCCB-208ENST00000468777 ARHGAP4P98171 946 aa21.75■■□□□ 1.07
PCCB-208ENST00000468777 PKP1Q13835 747 aa21.75■■□□□ 1.07
PCCB-208ENST00000468777 PIK3AP1Q6ZUJ8 805 aa21.75■■□□□ 1.07
PCCB-208ENST00000468777 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.75■■□□□ 1.07
PCCB-208ENST00000468777 EHMT1Q9H9B1 1298 aa21.75■■□□□ 1.07
PCCB-208ENST00000468777 VTA1Q9NP79 307 aa21.75■■□□□ 1.07
PCCB-208ENST00000468777 EIF3JO75822 258 aaKnown RBP21.74■■□□□ 1.07
PCCB-208ENST00000468777 TBCKQ8TEA7 893 aa21.74■■□□□ 1.07
PCCB-208ENST00000468777 TNFRSF25Q93038 417 aa21.74■■□□□ 1.07
PCCB-208ENST00000468777 H3BQV1 296 aa21.73■■□□□ 1.07
PCCB-208ENST00000468777 SAFBQ15424 915 aaKnown RBP eCLIP21.73■■□□□ 1.07
PCCB-208ENST00000468777 IFFO2Q5TF58 517 aa21.73■■□□□ 1.07
PCCB-208ENST00000468777 CYP2W1Q8TAV3 490 aa21.73■■□□□ 1.07
PCCB-208ENST00000468777 NRBP1Q9UHY1 535 aa21.73■■□□□ 1.07
PCCB-208ENST00000468777 CCDC194A0A1B0GVG4 234 aa21.73■■□□□ 1.07
PCCB-208ENST00000468777 KIF28PB7ZC32 967 aa21.73■■□□□ 1.07
PCCB-208ENST00000468777 SEPT4O43236 478 aa21.73■■□□□ 1.07
PCCB-208ENST00000468777 INF2Q27J81 1249 aa21.73■■□□□ 1.07
PCCB-208ENST00000468777 GJC2Q5T442 439 aaPredicted RBP21.73■■□□□ 1.07
PCCB-208ENST00000468777 CRYGNQ8WXF5 182 aa21.73■■□□□ 1.07
PCCB-208ENST00000468777 ABHD8Q96I13 439 aa21.73■■□□□ 1.07
PCCB-208ENST00000468777 GBP4Q96PP9 640 aa21.73■■□□□ 1.07
PCCB-208ENST00000468777 EDIL3O43854 480 aa21.72■■□□□ 1.07
PCCB-208ENST00000468777 ARIH2O95376 493 aa21.72■■□□□ 1.07
PCCB-208ENST00000468777 ITGB5P18084 799 aa21.72■■□□□ 1.07
PCCB-208ENST00000468777 NONOQ15233 471 aaKnown RBP eCLIP21.72■■□□□ 1.07
PCCB-208ENST00000468777 MCTP2Q6DN12 878 aa21.72■■□□□ 1.07
PCCB-208ENST00000468777 KRT25Q7Z3Z0 450 aa21.72■■□□□ 1.07
PCCB-208ENST00000468777 DEFB118Q96PH6 123 aa21.72■■□□□ 1.07
PCCB-208ENST00000468777 WDR11Q9BZH6 1224 aa21.72■■□□□ 1.07
PCCB-208ENST00000468777 PAK6Q9NQU5 681 aaPredicted RBP21.72■■□□□ 1.07
PCCB-208ENST00000468777 AKR1A1P14550 325 aa21.71■■□□□ 1.07
PCCB-208ENST00000468777 MCM4P33991 863 aa21.71■■□□□ 1.07
PCCB-208ENST00000468777 MCTP1Q6DN14 999 aa21.71■■□□□ 1.07
PCCB-208ENST00000468777 FRMPD3Q5JV73 1810 aa21.71■■□□□ 1.07
PCCB-208ENST00000468777 VPS37CA5D8V6 355 aaPredicted RBP21.71■■□□□ 1.07
PCCB-208ENST00000468777 SYT1P21579 422 aa21.71■■□□□ 1.07
PCCB-208ENST00000468777 GNL2Q13823 731 aaKnown RBP21.71■■□□□ 1.07
PCCB-208ENST00000468777 INPP4AQ96PE3 977 aaPredicted RBP21.71■■□□□ 1.07
PCCB-208ENST00000468777 DDX20Q9UHI6 824 aaKnown RBP21.71■■□□□ 1.07
PCCB-208ENST00000468777 FAM184BQ9ULE4 1060 aa21.71■■□□□ 1.07
PCCB-208ENST00000468777 ZDHHC9Q9Y397 364 aa21.71■■□□□ 1.07
PCCB-208ENST00000468777 FAM86B1E9PN63 330 aa21.7■■□□□ 1.06
PCCB-208ENST00000468777 FAM86B2P0C5J1 330 aa21.7■■□□□ 1.06
PCCB-208ENST00000468777 SMPD1P17405 629 aa21.7■■□□□ 1.06
PCCB-208ENST00000468777 ZNF76P36508 570 aa21.7■■□□□ 1.06
PCCB-208ENST00000468777 TNFAIP2Q03169 654 aa21.7■■□□□ 1.06
PCCB-208ENST00000468777 LY6KQ17RY6 165 aa21.7■■□□□ 1.06
PCCB-208ENST00000468777 XRRA1Q6P2D8 792 aa21.7■■□□□ 1.06
PCCB-208ENST00000468777 SCFD2Q8WU76 684 aa21.7■■□□□ 1.06
PCCB-208ENST00000468777 MRVI1Q9Y6F6 885 aa21.7■■□□□ 1.06
PCCB-208ENST00000468777 DOCK5Q9H7D0 1870 aa21.7■■□□□ 1.06
PCCB-208ENST00000468777 BRD1O95696 1058 aa21.69■■□□□ 1.06
PCCB-208ENST00000468777 SEMA3FQ13275 785 aa21.69■■□□□ 1.06
PCCB-208ENST00000468777 LHX8Q68G74 356 aa21.69■■□□□ 1.06
PCCB-208ENST00000468777 CLEC17AQ6ZS10 378 aa21.69■■□□□ 1.06
PCCB-208ENST00000468777 COPS5Q92905 334 aa21.69■■□□□ 1.06
PCCB-208ENST00000468777 UIMC1Q96RL1 719 aa21.69■■□□□ 1.06
PCCB-208ENST00000468777 FOXP1Q9H334 677 aaPredicted RBP21.69■■□□□ 1.06
PCCB-208ENST00000468777 UBIAD1Q9Y5Z9 338 aa21.69■■□□□ 1.06
PCCB-208ENST00000468777 SORBS3O60504 671 aa21.69■■□□□ 1.06
PCCB-208ENST00000468777 STAM2O75886 525 aa21.69■■□□□ 1.06
PCCB-208ENST00000468777 CYP3A4P08684 503 aa21.69■■□□□ 1.06
PCCB-208ENST00000468777 TXNP10599 105 aaKnown RBP21.69■■□□□ 1.06
PCCB-208ENST00000468777 PDCP20941 246 aa21.69■■□□□ 1.06
PCCB-208ENST00000468777 IRX5P78411 483 aaPredicted RBP21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms