RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 USP11P51784 963 aa18.25■□□□□ 0.51
GPC1-207ENST00000466624 MRPS9P82933 396 aaKnown RBP18.25■□□□□ 0.51
GPC1-207ENST00000466624 ARHGAP4P98171 946 aa18.25■□□□□ 0.51
GPC1-207ENST00000466624 NR5A1Q13285 461 aa18.25■□□□□ 0.51
GPC1-207ENST00000466624 ACVR2BQ13705 512 aa18.25■□□□□ 0.51
GPC1-207ENST00000466624 SH3TC2Q8TF17 1288 aa18.25■□□□□ 0.51
GPC1-207ENST00000466624 FRMPD3Q5JV73 1810 aa18.25■□□□□ 0.51
GPC1-207ENST00000466624 RBM47A0AV96 593 aaKnown RBP18.24■□□□□ 0.51
GPC1-207ENST00000466624 TRIM32Q13049 653 aa18.24■□□□□ 0.51
GPC1-207ENST00000466624 TBCKQ8TEA7 893 aa18.24■□□□□ 0.51
GPC1-207ENST00000466624 ZNF333Q96JL9 665 aa18.24■□□□□ 0.51
GPC1-207ENST00000466624 INPP4AQ96PE3 977 aaPredicted RBP18.24■□□□□ 0.51
GPC1-207ENST00000466624 RBM19Q9Y4C8 960 aaKnown RBP18.24■□□□□ 0.51
GPC1-207ENST00000466624 CIITAP33076 1130 aa18.23■□□□□ 0.51
GPC1-207ENST00000466624 GNL2Q13823 731 aaKnown RBP18.23■□□□□ 0.51
GPC1-207ENST00000466624 GNPTABQ3T906 1256 aa18.23■□□□□ 0.51
GPC1-207ENST00000466624 TAPT1Q6NXT6 567 aa18.23■□□□□ 0.51
GPC1-207ENST00000466624 KCNV1Q6PIU1 500 aa18.23■□□□□ 0.51
GPC1-207ENST00000466624 MOXD1Q6UVY6 613 aa18.23■□□□□ 0.51
GPC1-207ENST00000466624 PIK3AP1Q6ZUJ8 805 aa18.23■□□□□ 0.51
GPC1-207ENST00000466624 NIPA1Q7RTP0 329 aa18.23■□□□□ 0.51
GPC1-207ENST00000466624 NOSTRINQ8IVI9 506 aa18.23■□□□□ 0.51
GPC1-207ENST00000466624 FBXO16Q8IX29 292 aaPredicted RBP18.23■□□□□ 0.51
GPC1-207ENST00000466624 TRPV1Q8NER1 839 aa18.23■□□□□ 0.51
GPC1-207ENST00000466624 GPRASP2Q96D09 838 aa18.23■□□□□ 0.51
GPC1-207ENST00000466624 NAP1L4Q99733 375 aaKnown RBP18.23■□□□□ 0.51
GPC1-207ENST00000466624 HMX1Q9NP08 348 aaPredicted RBP18.23■□□□□ 0.51
GPC1-207ENST00000466624 UBIAD1Q9Y5Z9 338 aa18.23■□□□□ 0.51
GPC1-207ENST00000466624 DDX49Q9Y6V7 483 aaKnown RBP18.23■□□□□ 0.51
GPC1-207ENST00000466624 MAFGO15525 162 aa18.22■□□□□ 0.51
GPC1-207ENST00000466624 SEPT4O43236 478 aa18.22■□□□□ 0.51
GPC1-207ENST00000466624 STX6O43752 255 aa18.22■□□□□ 0.51
GPC1-207ENST00000466624 RGS20O76081 388 aa18.22■□□□□ 0.51
GPC1-207ENST00000466624 ICAM3P32942 547 aa18.22■□□□□ 0.51
GPC1-207ENST00000466624 INF2Q27J81 1249 aa18.22■□□□□ 0.51
GPC1-207ENST00000466624 EARS2Q5JPH6 523 aaKnown RBP18.22■□□□□ 0.51
GPC1-207ENST00000466624 NEK8Q86SG6 692 aa18.22■□□□□ 0.51
GPC1-207ENST00000466624 NLRX1Q86UT6 975 aa18.22■□□□□ 0.51
GPC1-207ENST00000466624 SCFD2Q8WU76 684 aa18.22■□□□□ 0.51
GPC1-207ENST00000466624 CDHR1Q96JP9 859 aa18.22■□□□□ 0.51
GPC1-207ENST00000466624 MXRA8Q9BRK3 442 aa18.22■□□□□ 0.51
GPC1-207ENST00000466624 ZHX1Q9UKY1 873 aaPredicted RBP18.22■□□□□ 0.51
GPC1-207ENST00000466624 FAM184BQ9ULE4 1060 aa18.22■□□□□ 0.51
GPC1-207ENST00000466624 CYP3A7-CYP3A51PA0A087WV96 503 aa18.21■□□□□ 0.51
GPC1-207ENST00000466624 KIF28PB7ZC32 967 aa18.21■□□□□ 0.51
GPC1-207ENST00000466624 MSCO60682 206 aa18.21■□□□□ 0.51
GPC1-207ENST00000466624 TGFB3P10600 412 aa18.21■□□□□ 0.51
GPC1-207ENST00000466624 AKR1A1P14550 325 aa18.21■□□□□ 0.51
GPC1-207ENST00000466624 CYP3A7P24462 503 aa18.21■□□□□ 0.51
GPC1-207ENST00000466624 CEP55Q53EZ4 464 aa18.21■□□□□ 0.51
GPC1-207ENST00000466624 PRAMEF19Q5SWL8 479 aa18.21■□□□□ 0.51
GPC1-207ENST00000466624 IQSEC1Q6DN90 963 aa18.21■□□□□ 0.51
GPC1-207ENST00000466624 EEPD1Q7L9B9 569 aa18.21■□□□□ 0.51
GPC1-207ENST00000466624 SPRYD3Q8NCJ5 442 aa18.21■□□□□ 0.51
GPC1-207ENST00000466624 JADE2Q9NQC1 790 aa18.21■□□□□ 0.51
GPC1-207ENST00000466624 MYH15Q9Y2K3 1946 aa18.21■□□□□ 0.51
GPC1-207ENST00000466624 VPS37CA5D8V6 355 aaPredicted RBP18.2■□□□□ 0.5
GPC1-207ENST00000466624 MEIS1O00470 390 aa18.2■□□□□ 0.5
GPC1-207ENST00000466624 NKRFO15226 690 aaKnown RBP eCLIP18.2■□□□□ 0.5
GPC1-207ENST00000466624 FIBPO43427 364 aa18.2■□□□□ 0.5
GPC1-207ENST00000466624 EDIL3O43854 480 aa18.2■□□□□ 0.5
GPC1-207ENST00000466624 GCFC2P16383 781 aaKnown RBP18.2■□□□□ 0.5
GPC1-207ENST00000466624 ITGB5P18084 799 aa18.2■□□□□ 0.5
GPC1-207ENST00000466624 CCND3P30281 292 aaPredicted RBP18.2■□□□□ 0.5
GPC1-207ENST00000466624 ZNF76P36508 570 aa18.2■□□□□ 0.5
GPC1-207ENST00000466624 TRAPPC10P48553 1259 aa18.2■□□□□ 0.5
GPC1-207ENST00000466624 SETQ01105 290 aaPredicted RBP18.2■□□□□ 0.5
GPC1-207ENST00000466624 TTLL4Q14679 1199 aa18.2■□□□□ 0.5
GPC1-207ENST00000466624 CCDC144BQ3MJ40 725 aa18.2■□□□□ 0.5
GPC1-207ENST00000466624 COL13A1Q5TAT6 717 aaPredicted RBP18.2■□□□□ 0.5
GPC1-207ENST00000466624 MCTP1Q6DN14 999 aa18.2■□□□□ 0.5
GPC1-207ENST00000466624 PPP4R3AQ6IN85 833 aa18.2■□□□□ 0.5
GPC1-207ENST00000466624 BRAPQ7Z569 592 aa18.2■□□□□ 0.5
GPC1-207ENST00000466624 MBOAT7Q96N66 472 aa18.2■□□□□ 0.5
GPC1-207ENST00000466624 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.2■□□□□ 0.5
GPC1-207ENST00000466624 PAK6Q9NQU5 681 aaPredicted RBP18.2■□□□□ 0.5
GPC1-207ENST00000466624 RTEL1Q9NZ71 1219 aa18.2■□□□□ 0.5
GPC1-207ENST00000466624 MTMR6Q9Y217 621 aa18.2■□□□□ 0.5
GPC1-207ENST00000466624 IGLV3-22A0A075B6J6 115 aa18.19■□□□□ 0.5
GPC1-207ENST00000466624 FAM205CA6NFA0 338 aa18.19■□□□□ 0.5
GPC1-207ENST00000466624 SPATA31C2B4DYI2 1134 aa18.19■□□□□ 0.5
GPC1-207ENST00000466624 FAM86B1E9PN63 330 aa18.19■□□□□ 0.5
GPC1-207ENST00000466624 FAM86B2P0C5J1 330 aa18.19■□□□□ 0.5
GPC1-207ENST00000466624 CCL5P13501 91 aa18.19■□□□□ 0.5
GPC1-207ENST00000466624 ADCYAP1R1P41586 468 aa18.19■□□□□ 0.5
GPC1-207ENST00000466624 ORC2Q13416 577 aaPredicted RBP18.19■□□□□ 0.5
GPC1-207ENST00000466624 Q4G0T1 1027 aa18.19■□□□□ 0.5
GPC1-207ENST00000466624 CCDC62Q6P9F0 684 aa18.19■□□□□ 0.5
GPC1-207ENST00000466624 SEPT14Q6ZU15 432 aa18.19■□□□□ 0.5
GPC1-207ENST00000466624 WDR11Q9BZH6 1224 aa18.19■□□□□ 0.5
GPC1-207ENST00000466624 UNC93B1Q9H1C4 597 aa18.19■□□□□ 0.5
GPC1-207ENST00000466624 PDGFCQ9NRA1 345 aa18.19■□□□□ 0.5
GPC1-207ENST00000466624 DDX20Q9UHI6 824 aaKnown RBP18.19■□□□□ 0.5
GPC1-207ENST00000466624 NOL7Q9UMY1 257 aaKnown RBP18.19■□□□□ 0.5
GPC1-207ENST00000466624 CAPN2P17655 700 aa18.18■□□□□ 0.5
GPC1-207ENST00000466624 CNGA1P29973 690 aa18.18■□□□□ 0.5
GPC1-207ENST00000466624 TNFAIP2Q03169 654 aa18.18■□□□□ 0.5
GPC1-207ENST00000466624 MTMR1Q13613 665 aa18.18■□□□□ 0.5
GPC1-207ENST00000466624 MTFR1Q15390 333 aa18.18■□□□□ 0.5
GPC1-207ENST00000466624 LETM2Q2VYF4 491 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms