RNA–Protein interactions for RNA: ENST00000462259.5

TARBP1-202, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

TSL 1 (best)

Gene TARBP1, Length 1,650 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-202ENST00000462259 SCRN1Q12765 414 aa12.38□□□□□ -0.43
TARBP1-202ENST00000462259 SNX17Q15036 470 aa12.38□□□□□ -0.43
TARBP1-202ENST00000462259 FSCN1Q16658 493 aaKnown RBP12.38□□□□□ -0.43
TARBP1-202ENST00000462259 LY6KQ17RY6 165 aa12.38□□□□□ -0.43
TARBP1-202ENST00000462259 GNASQ5JWF2 1037 aa12.38□□□□□ -0.43
TARBP1-202ENST00000462259 PRPF38BQ5VTL8 546 aaKnown RBP12.38□□□□□ -0.43
TARBP1-202ENST00000462259 SLC39A5Q6ZMH5 540 aa12.38□□□□□ -0.43
TARBP1-202ENST00000462259 TSEN34Q9BSV6 310 aaKnown RBP12.38□□□□□ -0.43
TARBP1-202ENST00000462259 SLC26A6Q9BXS9 759 aa12.38□□□□□ -0.43
TARBP1-202ENST00000462259 B4DLN1 442 aa12.37□□□□□ -0.43
TARBP1-202ENST00000462259 NEK4P51957 841 aa12.37□□□□□ -0.43
TARBP1-202ENST00000462259 MRPL12P52815 198 aaKnown RBP12.37□□□□□ -0.43
TARBP1-202ENST00000462259 RTP1P59025 263 aa12.37□□□□□ -0.43
TARBP1-202ENST00000462259 PPP1R18Q6NYC8 613 aa12.37□□□□□ -0.43
TARBP1-202ENST00000462259 CUL5Q93034 780 aa12.37□□□□□ -0.43
TARBP1-202ENST00000462259 PGBD1Q96JS3 809 aa12.37□□□□□ -0.43
TARBP1-202ENST00000462259 RNF26Q9BY78 433 aaPredicted RBP12.37□□□□□ -0.43
TARBP1-202ENST00000462259 RIC8AQ9NPQ8 531 aa12.37□□□□□ -0.43
TARBP1-202ENST00000462259 DDX41Q9UJV9 622 aaKnown RBP12.37□□□□□ -0.43
TARBP1-202ENST00000462259 LTBP2Q14767 1821 aa12.36□□□□□ -0.43
TARBP1-202ENST00000462259 SMCO2A6NFE2 343 aa12.36□□□□□ -0.43
TARBP1-202ENST00000462259 MOXD2PA6NHM9 499 aa12.36□□□□□ -0.43
TARBP1-202ENST00000462259 PFKFB2O60825 505 aa12.36□□□□□ -0.43
TARBP1-202ENST00000462259 EIF5BO60841 1220 aaKnown RBP12.36□□□□□ -0.43
TARBP1-202ENST00000462259 CCND2P30279 289 aa12.36□□□□□ -0.43
TARBP1-202ENST00000462259 SP2Q02086 613 aa12.36□□□□□ -0.43
TARBP1-202ENST00000462259 ARHGAP1Q07960 439 aa12.36□□□□□ -0.43
TARBP1-202ENST00000462259 SEMA3FQ13275 785 aa12.36□□□□□ -0.43
TARBP1-202ENST00000462259 TTLL4Q14679 1199 aa12.36□□□□□ -0.43
TARBP1-202ENST00000462259 ME3Q16798 604 aa12.36□□□□□ -0.43
TARBP1-202ENST00000462259 TRIM60Q495X7 471 aa12.36□□□□□ -0.43
TARBP1-202ENST00000462259 CXCL17Q6UXB2 119 aa12.36□□□□□ -0.43
TARBP1-202ENST00000462259 OR6J1Q8NGC5 347 aa12.36□□□□□ -0.43
TARBP1-202ENST00000462259 AIFM3Q96NN9 605 aa12.36□□□□□ -0.43
TARBP1-202ENST00000462259 C22orf23Q9BZE7 217 aa12.36□□□□□ -0.43
TARBP1-202ENST00000462259 AP5M1Q9H0R1 490 aa12.36□□□□□ -0.43
TARBP1-202ENST00000462259 BCAS3Q9H6U6 928 aa12.36□□□□□ -0.43
TARBP1-202ENST00000462259 SPC25Q9HBM1 224 aa12.36□□□□□ -0.43
TARBP1-202ENST00000462259 TMEM260Q9NX78 707 aa12.36□□□□□ -0.43
TARBP1-202ENST00000462259 ZMYND8Q9ULU4 1186 aaPredicted RBP12.36□□□□□ -0.43
TARBP1-202ENST00000462259 Q9Y3F1 56 aa12.36□□□□□ -0.43
TARBP1-202ENST00000462259 SCN10AQ9Y5Y9 1956 aa12.36□□□□□ -0.43
TARBP1-202ENST00000462259 SZT2Q5T011 3432 aa12.36□□□□□ -0.43
TARBP1-202ENST00000462259 GRIN2DO15399 1336 aa12.36□□□□□ -0.43
TARBP1-202ENST00000462259 hCG_1984214I3L0E3 225 aa12.35□□□□□ -0.43
TARBP1-202ENST00000462259 SORBS3O60504 671 aa12.35□□□□□ -0.43
TARBP1-202ENST00000462259 CTDNEP1O95476 244 aa12.35□□□□□ -0.43
TARBP1-202ENST00000462259 SYN1P17600 705 aa12.35□□□□□ -0.43
TARBP1-202ENST00000462259 CLK2P49760 499 aaKnown RBP12.35□□□□□ -0.43
TARBP1-202ENST00000462259 ADCY7P51828 1080 aa12.35□□□□□ -0.43
TARBP1-202ENST00000462259 ST3GAL1Q11201 340 aa12.35□□□□□ -0.43
TARBP1-202ENST00000462259 ZNF713Q8N859 430 aaPredicted RBP12.35□□□□□ -0.43
TARBP1-202ENST00000462259 NECAB1Q8N987 351 aa12.35□□□□□ -0.43
TARBP1-202ENST00000462259 INPP4AQ96PE3 977 aaPredicted RBP12.35□□□□□ -0.43
TARBP1-202ENST00000462259 RTEL1Q9NZ71 1219 aa12.35□□□□□ -0.43
TARBP1-202ENST00000462259 VPS54Q9P1Q0 977 aa12.35□□□□□ -0.43
TARBP1-202ENST00000462259 PCDHA6Q9UN73 950 aa12.35□□□□□ -0.43
TARBP1-202ENST00000462259 ATP11BQ9Y2G3 1177 aa12.35□□□□□ -0.43
TARBP1-202ENST00000462259 PCDHA8Q9Y5H6 950 aa12.35□□□□□ -0.43
TARBP1-202ENST00000462259 MRVI1Q9Y6F6 885 aa12.35□□□□□ -0.43
TARBP1-202ENST00000462259 TRIOBPQ9H2D6 2365 aa12.35□□□□□ -0.43
TARBP1-202ENST00000462259 RBM25P49756 843 aaKnown RBP12.35□□□□□ -0.43
TARBP1-202ENST00000462259 PSMC6P62333 389 aa12.35□□□□□ -0.43
TARBP1-202ENST00000462259 C1orf53Q5VUE5 145 aa12.35□□□□□ -0.43
TARBP1-202ENST00000462259 PCNX4Q63HM2 1172 aa12.35□□□□□ -0.43
TARBP1-202ENST00000462259 PCSK9Q8NBP7 692 aaKnown RBP12.35□□□□□ -0.43
TARBP1-202ENST00000462259 AFG1LQ8WV93 481 aa12.35□□□□□ -0.43
TARBP1-202ENST00000462259 STARD7Q9NQZ5 370 aa12.35□□□□□ -0.43
TARBP1-202ENST00000462259 TELO2Q9Y4R8 837 aa12.35□□□□□ -0.43
TARBP1-202ENST00000462259 NR2E3Q9Y5X4 410 aa12.35□□□□□ -0.43
TARBP1-202ENST00000462259 A6NJR5 290 aa12.34□□□□□ -0.43
TARBP1-202ENST00000462259 NKRFO15226 690 aaKnown RBP eCLIP12.34□□□□□ -0.43
TARBP1-202ENST00000462259 UBA1P22314 1058 aaKnown RBP12.34□□□□□ -0.43
TARBP1-202ENST00000462259 TLE2Q04725 743 aa12.34□□□□□ -0.43
TARBP1-202ENST00000462259 ANKRD1Q15327 319 aa12.34□□□□□ -0.43
TARBP1-202ENST00000462259 SH3RF1Q7Z6J0 888 aa12.34□□□□□ -0.43
TARBP1-202ENST00000462259 RASGRP4Q8TDF6 673 aa12.34□□□□□ -0.43
TARBP1-202ENST00000462259 PPP1R13LQ8WUF5 828 aa12.34□□□□□ -0.43
TARBP1-202ENST00000462259 GTF3C6Q969F1 213 aa12.34□□□□□ -0.43
TARBP1-202ENST00000462259 ANO3Q9BYT9 981 aa12.34□□□□□ -0.43
TARBP1-202ENST00000462259 ZMYND12Q9H0C1 365 aa12.34□□□□□ -0.43
TARBP1-202ENST00000462259 SLKQ9H2G2 1235 aaPredicted RBP12.34□□□□□ -0.43
TARBP1-202ENST00000462259 RBM27Q9P2N5 1060 aaKnown RBP12.34□□□□□ -0.43
TARBP1-202ENST00000462259 ELP1O95163 1332 aa12.33□□□□□ -0.43
TARBP1-202ENST00000462259 ESYT2A0FGR8 921 aa12.33□□□□□ -0.44
TARBP1-202ENST00000462259 SPDYE3A6NKU9 549 aa12.33□□□□□ -0.44
TARBP1-202ENST00000462259 SPATA31C2B4DYI2 1134 aa12.33□□□□□ -0.44
TARBP1-202ENST00000462259 CPLX1O14810 134 aa12.33□□□□□ -0.44
TARBP1-202ENST00000462259 PQBP1O60828 265 aaKnown RBP12.33□□□□□ -0.44
TARBP1-202ENST00000462259 GH1P01241 217 aa12.33□□□□□ -0.44
TARBP1-202ENST00000462259 MMP3P08254 477 aa12.33□□□□□ -0.44
TARBP1-202ENST00000462259 MYL3P08590 195 aa12.33□□□□□ -0.44
TARBP1-202ENST00000462259 ITGB5P18084 799 aa12.33□□□□□ -0.44
TARBP1-202ENST00000462259 CDK7P50613 346 aa12.33□□□□□ -0.44
TARBP1-202ENST00000462259 PURAQ00577 322 aaKnown RBP12.33□□□□□ -0.44
TARBP1-202ENST00000462259 AKAP17AQ02040 695 aaKnown RBP12.33□□□□□ -0.44
TARBP1-202ENST00000462259 SSRP1Q08945 709 aaKnown RBP12.33□□□□□ -0.44
TARBP1-202ENST00000462259 JAKMIP3Q5VZ66 844 aa12.33□□□□□ -0.44
TARBP1-202ENST00000462259 GLT1D1Q96MS3 346 aa12.33□□□□□ -0.44
TARBP1-202ENST00000462259 PDLIM7Q9NR12 457 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms