RNA–Protein interactions for RNA: ENST00000455383.5

MSH6-206, Transcript of mutS homolog 6, humanhuman

TSL 5

Gene MSH6, Length 578 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-206ENST00000455383 RRP1P56182 461 aaKnown RBP21.86■■□□□ 1.09
MSH6-206ENST00000455383 STXBP2Q15833 593 aa21.86■■□□□ 1.09
MSH6-206ENST00000455383 CCDC178Q5BJE1 867 aa21.86■■□□□ 1.09
MSH6-206ENST00000455383 SEPT14Q6ZU15 432 aa21.86■■□□□ 1.09
MSH6-206ENST00000455383 LRRC8DQ7L1W4 858 aa21.86■■□□□ 1.09
MSH6-206ENST00000455383 SPRED2Q7Z698 418 aa21.86■■□□□ 1.09
MSH6-206ENST00000455383 ADGRF4Q8IZF3 695 aa21.86■■□□□ 1.09
MSH6-206ENST00000455383 PNMA1Q8ND90 353 aa21.86■■□□□ 1.09
MSH6-206ENST00000455383 EMID1Q96A84 441 aaPredicted RBP21.86■■□□□ 1.09
MSH6-206ENST00000455383 C1QTNF1Q9BXJ1 281 aa21.86■■□□□ 1.09
MSH6-206ENST00000455383 GTF2IRD1Q9UHL9 959 aa21.86■■□□□ 1.09
MSH6-206ENST00000455383 KCNJ6P48051 423 aa21.85■■□□□ 1.09
MSH6-206ENST00000455383 CNKSR3Q6P9H4 555 aa21.85■■□□□ 1.09
MSH6-206ENST00000455383 MCF2L2Q86YR7 1114 aa21.85■■□□□ 1.09
MSH6-206ENST00000455383 RMDN3Q96TC7 470 aa21.85■■□□□ 1.09
MSH6-206ENST00000455383 LMCD1Q9NZU5 365 aa21.85■■□□□ 1.09
MSH6-206ENST00000455383 DDX41Q9UJV9 622 aaKnown RBP21.85■■□□□ 1.09
MSH6-206ENST00000455383 KIAA1217Q5T5P2 1943 aa21.84■■□□□ 1.09
MSH6-206ENST00000455383 LCHNA4D1U4 455 aa21.84■■□□□ 1.09
MSH6-206ENST00000455383 ZNF213O14771 459 aa21.84■■□□□ 1.09
MSH6-206ENST00000455383 NBNO60934 754 aa21.84■■□□□ 1.09
MSH6-206ENST00000455383 CKBP12277 381 aa21.84■■□□□ 1.09
MSH6-206ENST00000455383 SDSP20132 328 aa21.84■■□□□ 1.09
MSH6-206ENST00000455383 MFAP1P55081 439 aaKnown RBP21.84■■□□□ 1.09
MSH6-206ENST00000455383 DGKDQ16760 1214 aa21.84■■□□□ 1.09
MSH6-206ENST00000455383 TCTN1Q2MV58 587 aa21.84■■□□□ 1.09
MSH6-206ENST00000455383 TRAF7Q6Q0C0 670 aa21.84■■□□□ 1.09
MSH6-206ENST00000455383 IQCA1Q86XH1 822 aa21.84■■□□□ 1.09
MSH6-206ENST00000455383 HLA-CQ95604 372 aa21.84■■□□□ 1.09
MSH6-206ENST00000455383 CRBNQ96SW2 442 aa21.84■■□□□ 1.09
MSH6-206ENST00000455383 HDAC6Q9UBN7 1215 aa21.84■■□□□ 1.09
MSH6-206ENST00000455383 COL4A4P53420 1690 aaPredicted RBP21.83■■□□□ 1.09
MSH6-206ENST00000455383 TRIM6-TRIM34B2RNG4 842 aa21.83■■□□□ 1.09
MSH6-206ENST00000455383 HAS3O00219 553 aa21.83■■□□□ 1.09
MSH6-206ENST00000455383 KDM4AO75164 1064 aa21.83■■□□□ 1.09
MSH6-206ENST00000455383 F2P00734 622 aa21.83■■□□□ 1.09
MSH6-206ENST00000455383 HOXD8P13378 290 aaPredicted RBP21.83■■□□□ 1.09
MSH6-206ENST00000455383 PLA2G5P39877 138 aa21.83■■□□□ 1.09
MSH6-206ENST00000455383 CHMP4BP1P59074 171 aa21.83■■□□□ 1.09
MSH6-206ENST00000455383 DEFB103AP81534 67 aa21.83■■□□□ 1.09
MSH6-206ENST00000455383 GHRHRQ02643 423 aa21.83■■□□□ 1.09
MSH6-206ENST00000455383 TRIM71Q2Q1W2 868 aaKnown RBP21.83■■□□□ 1.09
MSH6-206ENST00000455383 QRICH1Q2TAL8 776 aa21.83■■□□□ 1.09
MSH6-206ENST00000455383 ASPRV1Q53RT3 343 aa21.83■■□□□ 1.09
MSH6-206ENST00000455383 KAT14Q9H8E8 782 aa21.83■■□□□ 1.09
MSH6-206ENST00000455383 JMJD4Q9H9V9 463 aa21.83■■□□□ 1.09
MSH6-206ENST00000455383 MRPL11Q9Y3B7 192 aaKnown RBP21.83■■□□□ 1.09
MSH6-206ENST00000455383 LAMA4Q16363 1823 aa21.83■■□□□ 1.08
MSH6-206ENST00000455383 ABHD14A-ACY1A0A1B0GW23 586 aa21.82■■□□□ 1.08
MSH6-206ENST00000455383 EIF3JO75822 258 aaKnown RBP21.82■■□□□ 1.08
MSH6-206ENST00000455383 PSEN2P49810 448 aa21.82■■□□□ 1.08
MSH6-206ENST00000455383 CHST3Q7LGC8 479 aa21.82■■□□□ 1.08
MSH6-206ENST00000455383 TMCO2Q7Z6W1 182 aaPredicted RBP21.82■■□□□ 1.08
MSH6-206ENST00000455383 FBXO11Q86XK2 927 aa21.82■■□□□ 1.08
MSH6-206ENST00000455383 KATNAL1Q9BW62 490 aa21.82■■□□□ 1.08
MSH6-206ENST00000455383 OPLAHO14841 1288 aa21.81■■□□□ 1.08
MSH6-206ENST00000455383 GJB5O95377 273 aa21.81■■□□□ 1.08
MSH6-206ENST00000455383 NR3C2P08235 984 aa21.81■■□□□ 1.08
MSH6-206ENST00000455383 PTK7Q13308 1070 aa21.81■■□□□ 1.08
MSH6-206ENST00000455383 LAMC2Q13753 1193 aa21.81■■□□□ 1.08
MSH6-206ENST00000455383 ARHGEF16Q5VV41 709 aa21.81■■□□□ 1.08
MSH6-206ENST00000455383 C7orf31Q8N865 590 aa21.81■■□□□ 1.08
MSH6-206ENST00000455383 ENAHQ8N8S7 591 aaPredicted RBP21.81■■□□□ 1.08
MSH6-206ENST00000455383 PPTC7Q8NI37 304 aa21.81■■□□□ 1.08
MSH6-206ENST00000455383 RILPL2Q969X0 211 aa21.81■■□□□ 1.08
MSH6-206ENST00000455383 ZSCAN10Q96SZ4 725 aaPredicted RBP21.81■■□□□ 1.08
MSH6-206ENST00000455383 LNPKQ9C0E8 428 aa21.81■■□□□ 1.08
MSH6-206ENST00000455383 PXMP2Q9NR77 195 aa21.81■■□□□ 1.08
MSH6-206ENST00000455383 ZSWIM5Q9P217 1185 aa21.81■■□□□ 1.08
MSH6-206ENST00000455383 B4E1Z4 1266 aa21.8■■□□□ 1.08
MSH6-206ENST00000455383 EIF2AK2P19525 551 aaKnown RBP21.8■■□□□ 1.08
MSH6-206ENST00000455383 HSD17B4P51659 736 aa21.8■■□□□ 1.08
MSH6-206ENST00000455383 ERVK-21P61565 698 aa21.8■■□□□ 1.08
MSH6-206ENST00000455383 MFSD10Q14728 455 aa21.8■■□□□ 1.08
MSH6-206ENST00000455383 WNT8BQ93098 351 aa21.8■■□□□ 1.08
MSH6-206ENST00000455383 RAD9AQ99638 391 aa21.8■■□□□ 1.08
MSH6-206ENST00000455383 OSBPL3Q9H4L5 887 aa21.8■■□□□ 1.08
MSH6-206ENST00000455383 EPHX3Q9H6B9 360 aa21.8■■□□□ 1.08
MSH6-206ENST00000455383 EFCAB14O75071 495 aa21.79■■□□□ 1.08
MSH6-206ENST00000455383 RGS20O76081 388 aa21.79■■□□□ 1.08
MSH6-206ENST00000455383 PARP1P09874 1014 aaKnown RBP21.79■■□□□ 1.08
MSH6-206ENST00000455383 MKRN4PQ13434 485 aaPredicted RBP21.79■■□□□ 1.08
MSH6-206ENST00000455383 MBTPS1Q14703 1052 aa21.79■■□□□ 1.08
MSH6-206ENST00000455383 KIAA0753Q2KHM9 967 aa21.79■■□□□ 1.08
MSH6-206ENST00000455383 SMC5Q8IY18 1101 aa21.79■■□□□ 1.08
MSH6-206ENST00000455383 ALG1Q9BT22 464 aa21.79■■□□□ 1.08
MSH6-206ENST00000455383 ZBED2Q9BTP6 218 aa21.79■■□□□ 1.08
MSH6-206ENST00000455383 SUGCTQ9HAC7 445 aa21.79■■□□□ 1.08
MSH6-206ENST00000455383 MRVI1Q9Y6F6 885 aa21.79■■□□□ 1.08
MSH6-206ENST00000455383 LINC01553A4QN01 128 aa21.78■■□□□ 1.08
MSH6-206ENST00000455383 ZNF618Q5T7W0 954 aa21.78■■□□□ 1.08
MSH6-206ENST00000455383 GDPD5Q8WTR4 605 aa21.78■■□□□ 1.08
MSH6-206ENST00000455383 MTMR8Q96EF0 704 aa21.78■■□□□ 1.08
MSH6-206ENST00000455383 TGS1Q96RS0 853 aaKnown RBP21.78■■□□□ 1.08
MSH6-206ENST00000455383 PDCD2LQ9BRP1 358 aa21.78■■□□□ 1.08
MSH6-206ENST00000455383 DSCC1Q9BVC3 393 aa21.78■■□□□ 1.08
MSH6-206ENST00000455383 MAP3K20Q9NYL2 800 aaKnown RBP21.78■■□□□ 1.08
MSH6-206ENST00000455383 ARIH1Q9Y4X5 557 aaPredicted RBP21.78■■□□□ 1.08
MSH6-206ENST00000455383 PPFIA4O75335 1185 aa21.77■■□□□ 1.08
MSH6-206ENST00000455383 ZNF286BP0CG31 522 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms