RNA–Protein interactions for RNA: ENST00000450649.6

SCUBE2-202, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene SCUBE2, Length 2,912 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-202ENST00000450649 BICDL2A1A5D9 508 aa18.96■□□□□ 0.63
SCUBE2-202ENST00000450649 PJA2O43164 708 aa18.96■□□□□ 0.63
SCUBE2-202ENST00000450649 ECM2O94769 699 aaPredicted RBP18.96■□□□□ 0.63
SCUBE2-202ENST00000450649 PCP11498 1178 aaKnown RBP18.96■□□□□ 0.63
SCUBE2-202ENST00000450649 EZRP15311 586 aaKnown RBP18.96■□□□□ 0.63
SCUBE2-202ENST00000450649 QPCTQ16769 361 aa18.96■□□□□ 0.63
SCUBE2-202ENST00000450649 TEX11Q8IYF3 940 aa18.96■□□□□ 0.63
SCUBE2-202ENST00000450649 FAXDC2Q96IV6 333 aa18.96■□□□□ 0.63
SCUBE2-202ENST00000450649 RIOK1Q9BRS2 568 aaKnown RBP18.96■□□□□ 0.63
SCUBE2-202ENST00000450649 NHSL1Q5SYE7 1610 aa18.95■□□□□ 0.62
SCUBE2-202ENST00000450649 DDAH1O94760 285 aa18.95■□□□□ 0.62
SCUBE2-202ENST00000450649 FGRP09769 529 aa18.95■□□□□ 0.62
SCUBE2-202ENST00000450649 E2F5Q15329 346 aa18.95■□□□□ 0.62
SCUBE2-202ENST00000450649 PAX7P23759 505 aa18.95■□□□□ 0.62
SCUBE2-202ENST00000450649 HSPA9P38646 679 aaKnown RBP18.95■□□□□ 0.62
SCUBE2-202ENST00000450649 PPP2R5AQ15172 486 aa18.95■□□□□ 0.62
SCUBE2-202ENST00000450649 MAGEC3Q8TD91 643 aa18.95■□□□□ 0.62
SCUBE2-202ENST00000450649 IQCDQ96DY2 449 aa18.95■□□□□ 0.62
SCUBE2-202ENST00000450649 KBTBD4Q9NVX7 518 aa18.95■□□□□ 0.62
SCUBE2-202ENST00000450649 TSKSQ9UJT2 592 aa18.95■□□□□ 0.62
SCUBE2-202ENST00000450649 ABCA3Q99758 1704 aa18.95■□□□□ 0.62
SCUBE2-202ENST00000450649 CNTNAP5Q8WYK1 1306 aa18.95■□□□□ 0.62
SCUBE2-202ENST00000450649 DUOX1Q9NRD9 1551 aa18.95■□□□□ 0.62
SCUBE2-202ENST00000450649 TRAPPC3O43617 180 aa18.94■□□□□ 0.62
SCUBE2-202ENST00000450649 VEGFAP15692 232 aaPredicted RBP18.94■□□□□ 0.62
SCUBE2-202ENST00000450649 GFPT1Q06210 699 aaPredicted RBP18.94■□□□□ 0.62
SCUBE2-202ENST00000450649 CRYMQ14894 314 aa18.94■□□□□ 0.62
SCUBE2-202ENST00000450649 CDC37Q16543 378 aaPredicted RBP18.94■□□□□ 0.62
SCUBE2-202ENST00000450649 BRIP1Q9BX63 1249 aa18.94■□□□□ 0.62
SCUBE2-202ENST00000450649 LRRC53A6NM62 1247 aa18.94■□□□□ 0.62
SCUBE2-202ENST00000450649 MYL1P05976 194 aa18.94■□□□□ 0.62
SCUBE2-202ENST00000450649 CHRNDQ07001 517 aa18.94■□□□□ 0.62
SCUBE2-202ENST00000450649 RRAGAQ7L523 313 aa18.94■□□□□ 0.62
SCUBE2-202ENST00000450649 SRBD1Q8N5C6 995 aaKnown RBP18.94■□□□□ 0.62
SCUBE2-202ENST00000450649 C3orf20Q8ND61 904 aa18.94■□□□□ 0.62
SCUBE2-202ENST00000450649 SEC16BQ96JE7 1060 aa18.94■□□□□ 0.62
SCUBE2-202ENST00000450649 ABCF2Q9UG63 623 aa18.94■□□□□ 0.62
SCUBE2-202ENST00000450649 SLC12A6Q9UHW9 1150 aa18.94■□□□□ 0.62
SCUBE2-202ENST00000450649 SIK3Q9Y2K2 1263 aa18.94■□□□□ 0.62
SCUBE2-202ENST00000450649 LEMD3Q9Y2U8 911 aa18.94■□□□□ 0.62
SCUBE2-202ENST00000450649 ZNF804BA4D1E1 1349 aa18.94■□□□□ 0.62
SCUBE2-202ENST00000450649 GCOM1H8Y6P7 765 aaPredicted RBP18.94■□□□□ 0.62
SCUBE2-202ENST00000450649 MYZAPP0CAP1 466 aa18.94■□□□□ 0.62
SCUBE2-202ENST00000450649 SLC1A4P43007 532 aa18.94■□□□□ 0.62
SCUBE2-202ENST00000450649 MMRN2Q9H8L6 949 aa18.94■□□□□ 0.62
SCUBE2-202ENST00000450649 PLCB1Q9NQ66 1216 aa18.94■□□□□ 0.62
SCUBE2-202ENST00000450649 BAZ2BQ9UIF8 2168 aaKnown RBP18.93■□□□□ 0.62
SCUBE2-202ENST00000450649 TMOD1P28289 359 aa18.93■□□□□ 0.62
SCUBE2-202ENST00000450649 UBA7P41226 1012 aa18.93■□□□□ 0.62
SCUBE2-202ENST00000450649 SCTRP47872 440 aa18.93■□□□□ 0.62
SCUBE2-202ENST00000450649 CLNS1AP54105 237 aaKnown RBP18.93■□□□□ 0.62
SCUBE2-202ENST00000450649 PDE4DQ08499 809 aa18.93■□□□□ 0.62
SCUBE2-202ENST00000450649 STK4Q13043 487 aa18.93■□□□□ 0.62
SCUBE2-202ENST00000450649 DTHD1Q6ZMT9 781 aa18.93■□□□□ 0.62
SCUBE2-202ENST00000450649 TMC4Q7Z404 712 aa18.93■□□□□ 0.62
SCUBE2-202ENST00000450649 RNF10Q8N5U6 811 aaKnown RBP18.93■□□□□ 0.62
SCUBE2-202ENST00000450649 OR2W6PQ8NHA6 318 aa18.93■□□□□ 0.62
SCUBE2-202ENST00000450649 LRRC15Q8TF66 581 aa18.93■□□□□ 0.62
SCUBE2-202ENST00000450649 ATP2C2O75185 946 aa18.93■□□□□ 0.62
SCUBE2-202ENST00000450649 NEBLO76041 1014 aa18.93■□□□□ 0.62
SCUBE2-202ENST00000450649 SCG2P13521 617 aa18.93■□□□□ 0.62
SCUBE2-202ENST00000450649 RNASE9P60153 205 aaKnown RBP18.93■□□□□ 0.62
SCUBE2-202ENST00000450649 COL22A1Q8NFW1 1626 aaPredicted RBP18.92■□□□□ 0.62
SCUBE2-202ENST00000450649 OPLAHO14841 1288 aa18.92■□□□□ 0.62
SCUBE2-202ENST00000450649 BACH1O14867 736 aa18.92■□□□□ 0.62
SCUBE2-202ENST00000450649 RAD51CO43502 376 aa18.92■□□□□ 0.62
SCUBE2-202ENST00000450649 PARP10Q53GL7 1025 aa18.92■□□□□ 0.62
SCUBE2-202ENST00000450649 CCDC178Q5BJE1 867 aa18.92■□□□□ 0.62
SCUBE2-202ENST00000450649 LRIG3Q6UXM1 1119 aa18.92■□□□□ 0.62
SCUBE2-202ENST00000450649 FRMD3A2A2Y4 597 aa18.92■□□□□ 0.62
SCUBE2-202ENST00000450649 FTCDO95954 541 aa18.92■□□□□ 0.62
SCUBE2-202ENST00000450649 HSD17B3P37058 310 aa18.92■□□□□ 0.62
SCUBE2-202ENST00000450649 SEMA3FQ13275 785 aa18.92■□□□□ 0.62
SCUBE2-202ENST00000450649 TLDC1Q6P9B6 456 aa18.92■□□□□ 0.62
SCUBE2-202ENST00000450649 CYP2D7A0A087X1C5 515 aa18.91■□□□□ 0.62
SCUBE2-202ENST00000450649 PALMO75781 387 aa18.91■□□□□ 0.62
SCUBE2-202ENST00000450649 FCER1AP12319 257 aa18.91■□□□□ 0.62
SCUBE2-202ENST00000450649 XRCC4Q13426 336 aa18.91■□□□□ 0.62
SCUBE2-202ENST00000450649 BYSLQ13895 437 aaKnown RBP18.91■□□□□ 0.62
SCUBE2-202ENST00000450649 HLTFQ14527 1009 aaKnown RBP eCLIP18.91■□□□□ 0.62
SCUBE2-202ENST00000450649 ASTE1Q2TB18 679 aaPredicted RBP18.91■□□□□ 0.62
SCUBE2-202ENST00000450649 VWA3BQ502W6 1294 aa18.91■□□□□ 0.62
SCUBE2-202ENST00000450649 LRCH2Q5VUJ6 765 aa18.91■□□□□ 0.62
SCUBE2-202ENST00000450649 CACNA2D3Q8IZS8 1091 aa18.91■□□□□ 0.62
SCUBE2-202ENST00000450649 NDST4Q9H3R1 872 aa18.91■□□□□ 0.62
SCUBE2-202ENST00000450649 ATP6V0A4Q9HBG4 840 aa18.91■□□□□ 0.62
SCUBE2-202ENST00000450649 A0A1B0GUA9 196 aa18.91■□□□□ 0.62
SCUBE2-202ENST00000450649 SLC8A1P32418 973 aa18.91■□□□□ 0.62
SCUBE2-202ENST00000450649 TAF1DQ9H5J8 278 aaPredicted RBP18.91■□□□□ 0.62
SCUBE2-202ENST00000450649 GRID2IPA4D2P6 1211 aa18.9■□□□□ 0.62
SCUBE2-202ENST00000450649 H0YGN5 161 aa18.9■□□□□ 0.62
SCUBE2-202ENST00000450649 PPP1R12AO14974 1030 aaPredicted RBP18.9■□□□□ 0.62
SCUBE2-202ENST00000450649 LACTB2Q53H82 288 aaPredicted RBP18.9■□□□□ 0.62
SCUBE2-202ENST00000450649 KLHL7Q8IXQ5 586 aa18.9■□□□□ 0.62
SCUBE2-202ENST00000450649 TMEM60Q9H2L4 133 aa18.9■□□□□ 0.62
SCUBE2-202ENST00000450649 SLAIN2Q9P270 581 aa18.9■□□□□ 0.62
SCUBE2-202ENST00000450649 BCCIPQ9P287 314 aaKnown RBP eCLIP18.9■□□□□ 0.62
SCUBE2-202ENST00000450649 NFS1Q9Y697 457 aa18.9■□□□□ 0.62
SCUBE2-202ENST00000450649 IFFO1Q0D2I5 559 aa18.9■□□□□ 0.62
SCUBE2-202ENST00000450649 KIRREL3Q8IZU9 778 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms