RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 CNGB1Q14028 1251 aaPredicted RBP8.98□□□□□ -0.97
SSXP3-201ENST00000442971 TMEM132BQ14DG7 1078 aa8.98□□□□□ -0.97
SSXP3-201ENST00000442971 LAIR1Q6GTX8 287 aa8.98□□□□□ -0.97
SSXP3-201ENST00000442971 RIOX2Q8IUF8 465 aa8.98□□□□□ -0.97
SSXP3-201ENST00000442971 SLF2Q8IX21 1173 aa8.98□□□□□ -0.97
SSXP3-201ENST00000442971 TOP1MTQ969P6 601 aa8.98□□□□□ -0.97
SSXP3-201ENST00000442971 ATG4CQ96DT6 458 aa8.98□□□□□ -0.97
SSXP3-201ENST00000442971 KATNBL1Q9H079 304 aa8.98□□□□□ -0.97
SSXP3-201ENST00000442971 TLE6Q9H808 572 aa8.98□□□□□ -0.97
SSXP3-201ENST00000442971 TBC1D17Q9HA65 648 aa8.98□□□□□ -0.97
SSXP3-201ENST00000442971 RAB23Q9ULC3 237 aa8.98□□□□□ -0.97
SSXP3-201ENST00000442971 DUSP12Q9UNI6 340 aa8.98□□□□□ -0.97
SSXP3-201ENST00000442971 FBN2P35556 2912 aa8.97□□□□□ -0.97
SSXP3-201ENST00000442971 ENO4A6NNW6 628 aa8.97□□□□□ -0.97
SSXP3-201ENST00000442971 TK2O00142 265 aa8.97□□□□□ -0.97
SSXP3-201ENST00000442971 WDR46O15213 610 aaKnown RBP8.97□□□□□ -0.97
SSXP3-201ENST00000442971 RETP07949 1114 aa8.97□□□□□ -0.97
SSXP3-201ENST00000442971 CSTF1Q05048 431 aaKnown RBP8.97□□□□□ -0.97
SSXP3-201ENST00000442971 TDGQ13569 410 aa8.97□□□□□ -0.97
SSXP3-201ENST00000442971 NFRKBQ6P4R8 1299 aa8.97□□□□□ -0.97
SSXP3-201ENST00000442971 METTL16Q86W50 562 aaKnown RBP8.97□□□□□ -0.97
SSXP3-201ENST00000442971 FOXP4Q8IVH2 680 aaPredicted RBP8.97□□□□□ -0.97
SSXP3-201ENST00000442971 TDRD5Q8NAT2 981 aaKnown RBP8.97□□□□□ -0.97
SSXP3-201ENST00000442971 PPP1R13LQ8WUF5 828 aa8.97□□□□□ -0.97
SSXP3-201ENST00000442971 DDX11Q96FC9 970 aa8.97□□□□□ -0.97
SSXP3-201ENST00000442971 LRIG1Q96JA1 1093 aa8.97□□□□□ -0.97
SSXP3-201ENST00000442971 TRIM34Q9BYJ4 488 aa8.97□□□□□ -0.97
SSXP3-201ENST00000442971 POMKQ9H5K3 350 aa8.97□□□□□ -0.97
SSXP3-201ENST00000442971 LAS1LQ9Y4W2 734 aaKnown RBP8.97□□□□□ -0.97
SSXP3-201ENST00000442971 CREBBPQ92793 2442 aa8.97□□□□□ -0.97
SSXP3-201ENST00000442971 COL12A1Q99715 3063 aa8.96□□□□□ -0.97
SSXP3-201ENST00000442971 DNAJC25-GNG10A0A024R161 153 aa8.96□□□□□ -0.98
SSXP3-201ENST00000442971 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.96□□□□□ -0.98
SSXP3-201ENST00000442971 GPR75-ASB3A0A0A6YYF3 556 aa8.96□□□□□ -0.98
SSXP3-201ENST00000442971 PER2O15055 1255 aa8.96□□□□□ -0.98
SSXP3-201ENST00000442971 LAMTOR5O43504 91 aa8.96□□□□□ -0.98
SSXP3-201ENST00000442971 PURAQ00577 322 aaKnown RBP8.96□□□□□ -0.98
SSXP3-201ENST00000442971 LPAL2Q16609 132 aa8.96□□□□□ -0.98
SSXP3-201ENST00000442971 ANKRD54Q6NXT1 300 aa8.96□□□□□ -0.98
SSXP3-201ENST00000442971 SYCE2Q6PIF2 218 aa8.96□□□□□ -0.98
SSXP3-201ENST00000442971 ARMCX2Q7L311 632 aa8.96□□□□□ -0.98
SSXP3-201ENST00000442971 DZIP1Q86YF9 867 aaKnown RBP8.96□□□□□ -0.98
SSXP3-201ENST00000442971 PDCD7Q8N8D1 485 aaKnown RBP8.96□□□□□ -0.98
SSXP3-201ENST00000442971 ZNF513Q8N8E2 541 aaPredicted RBP8.96□□□□□ -0.98
SSXP3-201ENST00000442971 IL17RAQ96F46 866 aa8.96□□□□□ -0.98
SSXP3-201ENST00000442971 ZFP91Q96JP5 570 aaPredicted RBP8.96□□□□□ -0.98
SSXP3-201ENST00000442971 SLC4A5Q9BY07 1137 aa8.96□□□□□ -0.98
SSXP3-201ENST00000442971 DHX36Q9H2U1 1008 aaKnown RBP8.96□□□□□ -0.98
SSXP3-201ENST00000442971 POLR3EQ9NVU0 708 aa8.96□□□□□ -0.98
SSXP3-201ENST00000442971 WNT16Q9UBV4 365 aa8.96□□□□□ -0.98
SSXP3-201ENST00000442971 CDH22Q9UJ99 828 aa8.96□□□□□ -0.98
SSXP3-201ENST00000442971 ADAMTS8Q9UP79 889 aa8.96□□□□□ -0.98
SSXP3-201ENST00000442971 SHROOM3Q8TF72 1996 aa8.96□□□□□ -0.98
SSXP3-201ENST00000442971 FBN3Q75N90 2809 aa8.96□□□□□ -0.98
SSXP3-201ENST00000442971 MROH7-TTC4A0A0A0MT08 1334 aa8.95□□□□□ -0.98
SSXP3-201ENST00000442971 NOTCH2Q04721 2471 aa8.95□□□□□ -0.98
SSXP3-201ENST00000442971 SCN10AQ9Y5Y9 1956 aa8.95□□□□□ -0.98
SSXP3-201ENST00000442971 FSD2A1L4K1 749 aa8.95□□□□□ -0.98
SSXP3-201ENST00000442971 PER1O15534 1290 aaPredicted RBP8.95□□□□□ -0.98
SSXP3-201ENST00000442971 PDE8BO95263 885 aa8.95□□□□□ -0.98
SSXP3-201ENST00000442971 IFIT1P09914 478 aaKnown RBP8.95□□□□□ -0.98
SSXP3-201ENST00000442971 SRGAP2BP0DMP2 458 aa8.95□□□□□ -0.98
SSXP3-201ENST00000442971 GLULP15104 373 aa8.95□□□□□ -0.98
SSXP3-201ENST00000442971 TECP42680 631 aa8.95□□□□□ -0.98
SSXP3-201ENST00000442971 KCNC4Q03721 635 aa8.95□□□□□ -0.98
SSXP3-201ENST00000442971 PTPN11Q06124 597 aaPredicted RBP8.95□□□□□ -0.98
SSXP3-201ENST00000442971 TROAPQ12815 778 aa8.95□□□□□ -0.98
SSXP3-201ENST00000442971 RAB3GAP1Q15042 981 aa8.95□□□□□ -0.98
SSXP3-201ENST00000442971 METTL24Q5JXM2 366 aa8.95□□□□□ -0.98
SSXP3-201ENST00000442971 HNRNPLLQ8WVV9 542 aaKnown RBP8.95□□□□□ -0.98
SSXP3-201ENST00000442971 NELL1Q92832 810 aa8.95□□□□□ -0.98
SSXP3-201ENST00000442971 CLP1Q92989 425 aaKnown RBP8.95□□□□□ -0.98
SSXP3-201ENST00000442971 NECTIN4Q96NY8 510 aa8.95□□□□□ -0.98
SSXP3-201ENST00000442971 PLVAPQ9BX97 442 aa8.95□□□□□ -0.98
SSXP3-201ENST00000442971 MYH16Q9H6N6 1097 aa8.95□□□□□ -0.98
SSXP3-201ENST00000442971 Q9Y3F1 56 aa8.95□□□□□ -0.98
SSXP3-201ENST00000442971 E9PSI1 815 aa8.94□□□□□ -0.98
SSXP3-201ENST00000442971 FLOT1O75955 427 aa8.94□□□□□ -0.98
SSXP3-201ENST00000442971 MAP4K4O95819 1239 aaPredicted RBP8.94□□□□□ -0.98
SSXP3-201ENST00000442971 CFHP08603 1231 aa8.94□□□□□ -0.98
SSXP3-201ENST00000442971 CKBP12277 381 aa8.94□□□□□ -0.98
SSXP3-201ENST00000442971 COPB2P35606 906 aa8.94□□□□□ -0.98
SSXP3-201ENST00000442971 STAT3P40763 770 aa8.94□□□□□ -0.98
SSXP3-201ENST00000442971 RIPK4P57078 832 aa8.94□□□□□ -0.98
SSXP3-201ENST00000442971 ZNF252P-AS1Q0IIN9 211 aa8.94□□□□□ -0.98
SSXP3-201ENST00000442971 PTGISQ16647 500 aa8.94□□□□□ -0.98
SSXP3-201ENST00000442971 AASDHQ4L235 1098 aaPredicted RBP8.94□□□□□ -0.98
SSXP3-201ENST00000442971 PHLDB3Q6NSJ2 640 aa8.94□□□□□ -0.98
SSXP3-201ENST00000442971 TMEM184AQ6ZMB5 413 aa8.94□□□□□ -0.98
SSXP3-201ENST00000442971 CCDC144CPQ8IYA2 1237 aa8.94□□□□□ -0.98
SSXP3-201ENST00000442971 VGLL2Q8N8G2 317 aa8.94□□□□□ -0.98
SSXP3-201ENST00000442971 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.94□□□□□ -0.98
SSXP3-201ENST00000442971 DBF4BQ8NFT6 615 aa8.94□□□□□ -0.98
SSXP3-201ENST00000442971 SPPL3Q8TCT6 385 aa8.94□□□□□ -0.98
SSXP3-201ENST00000442971 P2RX5Q93086 422 aa8.94□□□□□ -0.98
SSXP3-201ENST00000442971 UBL7Q96S82 380 aaPredicted RBP8.94□□□□□ -0.98
SSXP3-201ENST00000442971 MTG1Q9BT17 334 aaPredicted RBP8.94□□□□□ -0.98
SSXP3-201ENST00000442971 SPATA6Q9NWH7 488 aaPredicted RBP8.94□□□□□ -0.98
SSXP3-201ENST00000442971 RELNP78509 3460 aa8.94□□□□□ -0.98
SSXP3-201ENST00000442971 CAPNS1P04632 268 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms