RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 PCDHA1Q9Y5I3 950 aa19.89■□□□□ 0.77
CPSF4-203ENST00000430038 SPTBN5Q9NRC6 3674 aaKnown RBP19.89■□□□□ 0.77
CPSF4-203ENST00000430038 MMP3P08254 477 aa19.88■□□□□ 0.77
CPSF4-203ENST00000430038 TRDNQ13061 729 aa19.88■□□□□ 0.77
CPSF4-203ENST00000430038 FAM47CQ5HY64 1035 aa19.88■□□□□ 0.77
CPSF4-203ENST00000430038 MAFAQ8NHW3 353 aaPredicted RBP19.88■□□□□ 0.77
CPSF4-203ENST00000430038 NCOA7Q8NI08 942 aa19.88■□□□□ 0.77
CPSF4-203ENST00000430038 TIFAQ96CG3 184 aa19.88■□□□□ 0.77
CPSF4-203ENST00000430038 PDCD2LQ9BRP1 358 aa19.88■□□□□ 0.77
CPSF4-203ENST00000430038 YBX2Q9Y2T7 364 aaKnown RBP19.88■□□□□ 0.77
CPSF4-203ENST00000430038 PTPRSQ13332 1948 aa19.88■□□□□ 0.77
CPSF4-203ENST00000430038 REV3LO60673 3130 aa19.87■□□□□ 0.77
CPSF4-203ENST00000430038 TMEM265A0A087WTH1 108 aa19.87■□□□□ 0.77
CPSF4-203ENST00000430038 SP2Q02086 613 aa19.87■□□□□ 0.77
CPSF4-203ENST00000430038 GPNMBQ14956 572 aa19.87■□□□□ 0.77
CPSF4-203ENST00000430038 WTAPQ15007 396 aa19.87■□□□□ 0.77
CPSF4-203ENST00000430038 NFRKBQ6P4R8 1299 aa19.87■□□□□ 0.77
CPSF4-203ENST00000430038 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.87■□□□□ 0.77
CPSF4-203ENST00000430038 PIBF1Q8WXW3 757 aa19.87■□□□□ 0.77
CPSF4-203ENST00000430038 MPHOSPH6Q99547 160 aaKnown RBP19.87■□□□□ 0.77
CPSF4-203ENST00000430038 MYL10Q9BUA6 226 aa19.87■□□□□ 0.77
CPSF4-203ENST00000430038 LY9Q9HBG7 655 aa19.87■□□□□ 0.77
CPSF4-203ENST00000430038 TANC1Q9C0D5 1861 aa19.87■□□□□ 0.77
CPSF4-203ENST00000430038 B4DLN1 442 aa19.86■□□□□ 0.77
CPSF4-203ENST00000430038 SORBS3O60504 671 aa19.86■□□□□ 0.77
CPSF4-203ENST00000430038 EIF3JO75822 258 aaKnown RBP19.86■□□□□ 0.77
CPSF4-203ENST00000430038 GH1P01241 217 aa19.86■□□□□ 0.77
CPSF4-203ENST00000430038 MYOGP15173 224 aa19.86■□□□□ 0.77
CPSF4-203ENST00000430038 MRPL12P52815 198 aaKnown RBP19.86■□□□□ 0.77
CPSF4-203ENST00000430038 RABGGTBP53611 331 aa19.86■□□□□ 0.77
CPSF4-203ENST00000430038 CHMP4BP1P59074 171 aa19.86■□□□□ 0.77
CPSF4-203ENST00000430038 PGM5Q15124 567 aa19.86■□□□□ 0.77
CPSF4-203ENST00000430038 TMEM67Q5HYA8 995 aa19.86■□□□□ 0.77
CPSF4-203ENST00000430038 DEFB128Q7Z7B8 93 aa19.86■□□□□ 0.77
CPSF4-203ENST00000430038 USP38Q8NB14 1042 aa19.86■□□□□ 0.77
CPSF4-203ENST00000430038 MYCLP12524 364 aaPredicted RBP19.85■□□□□ 0.77
CPSF4-203ENST00000430038 FOSL2P15408 326 aa19.85■□□□□ 0.77
CPSF4-203ENST00000430038 HIC1Q14526 733 aa19.85■□□□□ 0.77
CPSF4-203ENST00000430038 GDF6Q6KF10 455 aaPredicted RBP19.85■□□□□ 0.77
CPSF4-203ENST00000430038 RALYLQ86SE5 291 aaKnown RBP19.85■□□□□ 0.77
CPSF4-203ENST00000430038 VSIG10LQ86VR7 867 aa19.85■□□□□ 0.77
CPSF4-203ENST00000430038 DHX38Q92620 1227 aaKnown RBP19.85■□□□□ 0.77
CPSF4-203ENST00000430038 PNMA6FA0A0J9YX94 578 aa19.84■□□□□ 0.77
CPSF4-203ENST00000430038 KPNA6O60684 536 aa19.84■□□□□ 0.77
CPSF4-203ENST00000430038 IQCF3P0C7M6 154 aa19.84■□□□□ 0.77
CPSF4-203ENST00000430038 SUPT20HL2P0C7V6 817 aa19.84■□□□□ 0.77
CPSF4-203ENST00000430038 ESYT1Q9BSJ8 1104 aa19.84■□□□□ 0.77
CPSF4-203ENST00000430038 COL25A1Q9BXS0 654 aaPredicted RBP19.84■□□□□ 0.77
CPSF4-203ENST00000430038 NKX2-4Q9H2Z4 354 aa19.84■□□□□ 0.77
CPSF4-203ENST00000430038 TELO2Q9Y4R8 837 aa19.84■□□□□ 0.77
CPSF4-203ENST00000430038 SLC27A2O14975 620 aa19.83■□□□□ 0.77
CPSF4-203ENST00000430038 ADGRE1Q14246 886 aa19.83■□□□□ 0.77
CPSF4-203ENST00000430038 NECTIN1Q15223 517 aa19.83■□□□□ 0.77
CPSF4-203ENST00000430038 HSDL1Q3SXM5 330 aa19.83■□□□□ 0.77
CPSF4-203ENST00000430038 BRDTQ58F21 947 aaPredicted RBP19.83■□□□□ 0.77
CPSF4-203ENST00000430038 MYSM1Q5VVJ2 828 aa19.83■□□□□ 0.77
CPSF4-203ENST00000430038 FCHSD1Q86WN1 690 aa19.83■□□□□ 0.77
CPSF4-203ENST00000430038 CMTR1Q8N1G2 835 aaKnown RBP19.83■□□□□ 0.77
CPSF4-203ENST00000430038 WNT8BQ93098 351 aa19.83■□□□□ 0.77
CPSF4-203ENST00000430038 EMID1Q96A84 441 aaPredicted RBP19.83■□□□□ 0.77
CPSF4-203ENST00000430038 PRDM12Q9H4Q4 367 aa19.83■□□□□ 0.77
CPSF4-203ENST00000430038 ERICH2A1L162 156 aa19.82■□□□□ 0.76
CPSF4-203ENST00000430038 HAS3O00219 553 aa19.82■□□□□ 0.76
CPSF4-203ENST00000430038 PLEKHA8P1O95397 391 aa19.82■□□□□ 0.76
CPSF4-203ENST00000430038 ZNF286BP0CG31 522 aa19.82■□□□□ 0.76
CPSF4-203ENST00000430038 RXRAP19793 462 aa19.82■□□□□ 0.76
CPSF4-203ENST00000430038 MRPS9P82933 396 aaKnown RBP19.82■□□□□ 0.76
CPSF4-203ENST00000430038 ZNF200P98182 395 aaPredicted RBP19.82■□□□□ 0.76
CPSF4-203ENST00000430038 PTPN11Q06124 597 aaPredicted RBP19.82■□□□□ 0.76
CPSF4-203ENST00000430038 PTGISQ16647 500 aa19.82■□□□□ 0.76
CPSF4-203ENST00000430038 TCTN1Q2MV58 587 aa19.82■□□□□ 0.76
CPSF4-203ENST00000430038 RAB11FIP4Q86YS3 637 aa19.82■□□□□ 0.76
CPSF4-203ENST00000430038 RPUSD2Q8IZ73 545 aaKnown RBP19.82■□□□□ 0.76
CPSF4-203ENST00000430038 ZNF654Q8IZM8 581 aa19.82■□□□□ 0.76
CPSF4-203ENST00000430038 PRDM6Q9NQX0 595 aa19.82■□□□□ 0.76
CPSF4-203ENST00000430038 MAP3K20Q9NYL2 800 aaKnown RBP19.82■□□□□ 0.76
CPSF4-203ENST00000430038 HDAC6Q9UBN7 1215 aa19.82■□□□□ 0.76
CPSF4-203ENST00000430038 MRVI1Q9Y6F6 885 aa19.82■□□□□ 0.76
CPSF4-203ENST00000430038 GCOM1H8Y6P7 765 aaPredicted RBP19.81■□□□□ 0.76
CPSF4-203ENST00000430038 SH2B2O14492 632 aaPredicted RBP19.81■□□□□ 0.76
CPSF4-203ENST00000430038 PRC1O43663 620 aa19.81■□□□□ 0.76
CPSF4-203ENST00000430038 POLR2MP0CAP2 368 aa19.81■□□□□ 0.76
CPSF4-203ENST00000430038 CASTP20810 708 aaKnown RBP19.81■□□□□ 0.76
CPSF4-203ENST00000430038 SEMA3FQ13275 785 aa19.81■□□□□ 0.76
CPSF4-203ENST00000430038 CATIPQ7Z7H3 387 aa19.81■□□□□ 0.76
CPSF4-203ENST00000430038 SESTD1Q86VW0 696 aa19.81■□□□□ 0.76
CPSF4-203ENST00000430038 SRBD1Q8N5C6 995 aaKnown RBP19.81■□□□□ 0.76
CPSF4-203ENST00000430038 ALG1Q9BT22 464 aa19.81■□□□□ 0.76
CPSF4-203ENST00000430038 LRRC2Q9BYS8 371 aa19.81■□□□□ 0.76
CPSF4-203ENST00000430038 ARHGEF15O94989 841 aa19.8■□□□□ 0.76
CPSF4-203ENST00000430038 HOXD8P13378 290 aaPredicted RBP19.8■□□□□ 0.76
CPSF4-203ENST00000430038 UBA1P22314 1058 aaKnown RBP19.8■□□□□ 0.76
CPSF4-203ENST00000430038 PSEN2P49810 448 aa19.8■□□□□ 0.76
CPSF4-203ENST00000430038 LAMC2Q13753 1193 aa19.8■□□□□ 0.76
CPSF4-203ENST00000430038 DGKDQ16760 1214 aa19.8■□□□□ 0.76
CPSF4-203ENST00000430038 CELF3Q5SZQ8 465 aaKnown RBP19.8■□□□□ 0.76
CPSF4-203ENST00000430038 CREB3L3Q68CJ9 461 aa19.8■□□□□ 0.76
CPSF4-203ENST00000430038 USP17L6PQ6QN14 398 aa19.8■□□□□ 0.76
CPSF4-203ENST00000430038 DHX37Q8IY37 1157 aaKnown RBP19.8■□□□□ 0.76
CPSF4-203ENST00000430038 PPTC7Q8NI37 304 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms