RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 KCNAB2Q13303 367 aa7.73□□□□□ -1.17
HMGB3P5-201ENST00000428894 SLC10A6Q3KNW5 377 aa7.73□□□□□ -1.17
HMGB3P5-201ENST00000428894 CEP68Q76N32 757 aa7.73□□□□□ -1.17
HMGB3P5-201ENST00000428894 FEZF2Q8TBJ5 459 aa7.73□□□□□ -1.17
HMGB3P5-201ENST00000428894 CPA5Q8WXQ8 436 aa7.73□□□□□ -1.17
HMGB3P5-201ENST00000428894 KRTAP4-7Q9BYR0 210 aa7.73□□□□□ -1.17
HMGB3P5-201ENST00000428894 AP5M1Q9H0R1 490 aa7.73□□□□□ -1.17
HMGB3P5-201ENST00000428894 XYLT2Q9H1B5 865 aa7.73□□□□□ -1.17
HMGB3P5-201ENST00000428894 A0A0G2JLL6 359 aaPredicted RBP7.72□□□□□ -1.17
HMGB3P5-201ENST00000428894 OTOL1A6NHN0 477 aaPredicted RBP7.72□□□□□ -1.17
HMGB3P5-201ENST00000428894 MYO1BO43795 1136 aa7.72□□□□□ -1.17
HMGB3P5-201ENST00000428894 FPR2P25090 351 aa7.72□□□□□ -1.17
HMGB3P5-201ENST00000428894 BCL6P41182 706 aa7.72□□□□□ -1.17
HMGB3P5-201ENST00000428894 GTF2A2P52657 109 aa7.72□□□□□ -1.17
HMGB3P5-201ENST00000428894 GFRA1P56159 465 aa7.72□□□□□ -1.17
HMGB3P5-201ENST00000428894 CACNB2Q08289 660 aaPredicted RBP7.72□□□□□ -1.17
HMGB3P5-201ENST00000428894 VWA3BQ502W6 1294 aa7.72□□□□□ -1.17
HMGB3P5-201ENST00000428894 ACBD5Q5T8D3 534 aaPredicted RBP7.72□□□□□ -1.17
HMGB3P5-201ENST00000428894 PPIL6Q8IXY8 311 aa7.72□□□□□ -1.17
HMGB3P5-201ENST00000428894 SP8Q8IXZ3 490 aa7.72□□□□□ -1.17
HMGB3P5-201ENST00000428894 ZDHHC14Q8IZN3 488 aa7.72□□□□□ -1.17
HMGB3P5-201ENST00000428894 TMEM145Q8NBT3 493 aa7.72□□□□□ -1.17
HMGB3P5-201ENST00000428894 SYT8Q8NBV8 401 aa7.72□□□□□ -1.17
HMGB3P5-201ENST00000428894 SMARCC2Q8TAQ2 1214 aa7.72□□□□□ -1.17
HMGB3P5-201ENST00000428894 TRMT2BQ96GJ1 504 aaKnown RBP7.72□□□□□ -1.17
HMGB3P5-201ENST00000428894 LUC7LQ9NQ29 371 aaKnown RBP7.72□□□□□ -1.17
HMGB3P5-201ENST00000428894 PODXL2Q9NZ53 605 aa7.72□□□□□ -1.17
HMGB3P5-201ENST00000428894 RIMBP3CA6NJZ7 1639 aa7.71□□□□□ -1.17
HMGB3P5-201ENST00000428894 RIMBP3BA6NNM3 1639 aa7.71□□□□□ -1.17
HMGB3P5-201ENST00000428894 RIMBP3Q9UFD9 1639 aa7.71□□□□□ -1.17
HMGB3P5-201ENST00000428894 SGSM2O43147 1006 aa7.71□□□□□ -1.18
HMGB3P5-201ENST00000428894 KLF4O43474 513 aa7.71□□□□□ -1.18
HMGB3P5-201ENST00000428894 GRIA2P42262 883 aa7.71□□□□□ -1.18
HMGB3P5-201ENST00000428894 PPP2R2AP63151 447 aa7.71□□□□□ -1.18
HMGB3P5-201ENST00000428894 HTRA3P83110 453 aa7.71□□□□□ -1.18
HMGB3P5-201ENST00000428894 DDR2Q16832 855 aa7.71□□□□□ -1.18
HMGB3P5-201ENST00000428894 DENND5AQ6IQ26 1287 aa7.71□□□□□ -1.18
HMGB3P5-201ENST00000428894 ADGRG2Q8IZP9 1017 aa7.71□□□□□ -1.18
HMGB3P5-201ENST00000428894 RCBTB1Q8NDN9 531 aa7.71□□□□□ -1.18
HMGB3P5-201ENST00000428894 SEC14L1Q92503 715 aa7.71□□□□□ -1.18
HMGB3P5-201ENST00000428894 RELTQ969Z4 430 aa7.71□□□□□ -1.18
HMGB3P5-201ENST00000428894 MROH2BQ7Z745 1585 aa7.71□□□□□ -1.18
HMGB3P5-201ENST00000428894 A0A1B0GTL3 188 aa7.7□□□□□ -1.18
HMGB3P5-201ENST00000428894 A0A1W2PQU0 124 aa7.7□□□□□ -1.18
HMGB3P5-201ENST00000428894 CAPNS1P04632 268 aa7.7□□□□□ -1.18
HMGB3P5-201ENST00000428894 LCP1P13796 627 aa7.7□□□□□ -1.18
HMGB3P5-201ENST00000428894 LTBRP36941 435 aa7.7□□□□□ -1.18
HMGB3P5-201ENST00000428894 SLURP1P55000 103 aa7.7□□□□□ -1.18
HMGB3P5-201ENST00000428894 TESK1Q15569 626 aa7.7□□□□□ -1.18
HMGB3P5-201ENST00000428894 MROH9Q5TGP6 573 aa7.7□□□□□ -1.18
HMGB3P5-201ENST00000428894 SAPCD2Q86UD0 394 aa7.7□□□□□ -1.18
HMGB3P5-201ENST00000428894 NLRP10Q86W26 655 aa7.7□□□□□ -1.18
HMGB3P5-201ENST00000428894 ZNF526Q8TF50 670 aaPredicted RBP7.7□□□□□ -1.18
HMGB3P5-201ENST00000428894 TMEM169Q96HH4 297 aa7.7□□□□□ -1.18
HMGB3P5-201ENST00000428894 CHAMP1Q96JM3 812 aa7.7□□□□□ -1.18
HMGB3P5-201ENST00000428894 NOX5Q96PH1 765 aa7.7□□□□□ -1.18
HMGB3P5-201ENST00000428894 X6R8D5 127 aa7.7□□□□□ -1.18
HMGB3P5-201ENST00000428894 FANCD2Q9BXW9 1451 aa7.69□□□□□ -1.18
HMGB3P5-201ENST00000428894 B8ZZF3 427 aa7.69□□□□□ -1.18
HMGB3P5-201ENST00000428894 KCNC1P48547 511 aa7.69□□□□□ -1.18
HMGB3P5-201ENST00000428894 SLC35F1Q5T1Q4 408 aa7.69□□□□□ -1.18
HMGB3P5-201ENST00000428894 CYB5RLQ6IPT4 315 aa7.69□□□□□ -1.18
HMGB3P5-201ENST00000428894 RIOX2Q8IUF8 465 aa7.69□□□□□ -1.18
HMGB3P5-201ENST00000428894 DDX11Q96FC9 970 aa7.69□□□□□ -1.18
HMGB3P5-201ENST00000428894 C1orf159Q96HA4 380 aa7.69□□□□□ -1.18
HMGB3P5-201ENST00000428894 FBXL7Q9UJT9 491 aa7.69□□□□□ -1.18
HMGB3P5-201ENST00000428894 COA3Q9Y2R0 106 aaPredicted RBP7.69□□□□□ -1.18
HMGB3P5-201ENST00000428894 PCDHA2Q9Y5H9 948 aa7.69□□□□□ -1.18
HMGB3P5-201ENST00000428894 SLC6A11P48066 632 aa7.68□□□□□ -1.18
HMGB3P5-201ENST00000428894 LSAMPQ13449 338 aa7.68□□□□□ -1.18
HMGB3P5-201ENST00000428894 NFIXQ14938 502 aa7.68□□□□□ -1.18
HMGB3P5-201ENST00000428894 LIPIQ6XZB0 460 aa7.68□□□□□ -1.18
HMGB3P5-201ENST00000428894 ETV3LQ6ZN32 361 aa7.68□□□□□ -1.18
HMGB3P5-201ENST00000428894 MILR1Q7Z6M3 343 aa7.68□□□□□ -1.18
HMGB3P5-201ENST00000428894 Q8N1Y9 231 aa7.68□□□□□ -1.18
HMGB3P5-201ENST00000428894 KCTD13Q8WZ19 329 aa7.68□□□□□ -1.18
HMGB3P5-201ENST00000428894 PALD1Q9ULE6 856 aa7.68□□□□□ -1.18
HMGB3P5-201ENST00000428894 SH3D21A4FU49 640 aa7.67□□□□□ -1.18
HMGB3P5-201ENST00000428894 C8BP07358 591 aa7.67□□□□□ -1.18
HMGB3P5-201ENST00000428894 CYP2C8P10632 490 aa7.67□□□□□ -1.18
HMGB3P5-201ENST00000428894 DLX2Q07687 328 aaPredicted RBP7.67□□□□□ -1.18
HMGB3P5-201ENST00000428894 MAP4K2Q12851 820 aa7.67□□□□□ -1.18
HMGB3P5-201ENST00000428894 IER2Q9BTL4 223 aa7.67□□□□□ -1.18
HMGB3P5-201ENST00000428894 RTEL1Q9NZ71 1219 aa7.67□□□□□ -1.18
HMGB3P5-201ENST00000428894 H7BY64 318 aa7.66□□□□□ -1.18
HMGB3P5-201ENST00000428894 PRRG2O14669 202 aa7.66□□□□□ -1.18
HMGB3P5-201ENST00000428894 ZC3H6P61129 1189 aaKnown RBP7.66□□□□□ -1.18
HMGB3P5-201ENST00000428894 RAB33AQ14088 237 aa7.66□□□□□ -1.18
HMGB3P5-201ENST00000428894 HSP90AA2PQ14568 343 aaPredicted RBP7.66□□□□□ -1.18
HMGB3P5-201ENST00000428894 NAALADL2Q58DX5 795 aa7.66□□□□□ -1.18
HMGB3P5-201ENST00000428894 CD300LDQ6UXZ3 194 aa7.66□□□□□ -1.18
HMGB3P5-201ENST00000428894 MIB1Q86YT6 1006 aa7.66□□□□□ -1.18
HMGB3P5-201ENST00000428894 FAM26EQ8N5C1 309 aa7.66□□□□□ -1.18
HMGB3P5-201ENST00000428894 ZBTB8AQ96BR9 441 aa7.66□□□□□ -1.18
HMGB3P5-201ENST00000428894 SGSM3Q96HU1 749 aa7.66□□□□□ -1.18
HMGB3P5-201ENST00000428894 SPATA25Q9BR10 227 aa7.66□□□□□ -1.18
HMGB3P5-201ENST00000428894 CLDND1Q9NY35 253 aa7.66□□□□□ -1.18
HMGB3P5-201ENST00000428894 ARHGEF11O15085 1522 aa7.66□□□□□ -1.18
HMGB3P5-201ENST00000428894 IQCA1LA6NCM1 817 aa7.65□□□□□ -1.18
HMGB3P5-201ENST00000428894 NCANO14594 1321 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms