RNA–Protein interactions for RNA: ENST00000428088.1

AL954642.1-201, humanhuman

TSL 3 BASIC

Gene AL954642.1, Length 538 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL954642.1-201ENST00000428088 CHMP4BP1P59074 171 aa22.1■■□□□ 1.13
AL954642.1-201ENST00000428088 PSRC1Q6PGN9 363 aaPredicted RBP22.1■■□□□ 1.13
AL954642.1-201ENST00000428088 NFXL1Q6ZNB6 911 aa22.1■■□□□ 1.13
AL954642.1-201ENST00000428088 SAMD3Q8N6K7 520 aa22.1■■□□□ 1.13
AL954642.1-201ENST00000428088 CTCFLQ8NI51 663 aaPredicted RBP22.1■■□□□ 1.13
AL954642.1-201ENST00000428088 MTA3Q9BTC8 594 aa22.1■■□□□ 1.13
AL954642.1-201ENST00000428088 WNT8AQ9H1J5 351 aa22.1■■□□□ 1.13
AL954642.1-201ENST00000428088 TTYH1Q9H313 450 aaPredicted RBP22.1■■□□□ 1.13
AL954642.1-201ENST00000428088 MRVI1Q9Y6F6 885 aa22.1■■□□□ 1.13
AL954642.1-201ENST00000428088 DDAH1O94760 285 aa22.09■■□□□ 1.13
AL954642.1-201ENST00000428088 MMP3P08254 477 aa22.09■■□□□ 1.13
AL954642.1-201ENST00000428088 SUPT20HL2P0C7V6 817 aa22.09■■□□□ 1.13
AL954642.1-201ENST00000428088 PGM5Q15124 567 aa22.09■■□□□ 1.13
AL954642.1-201ENST00000428088 FCHSD1Q86WN1 690 aa22.09■■□□□ 1.13
AL954642.1-201ENST00000428088 IL31RAQ8NI17 732 aa22.09■■□□□ 1.13
AL954642.1-201ENST00000428088 MAP3K14Q99558 947 aa22.09■■□□□ 1.13
AL954642.1-201ENST00000428088 CCDC69A6NI79 296 aa22.08■■□□□ 1.13
AL954642.1-201ENST00000428088 RGS20O76081 388 aa22.08■■□□□ 1.13
AL954642.1-201ENST00000428088 KIF5BP33176 963 aa22.08■■□□□ 1.13
AL954642.1-201ENST00000428088 RASIP1Q5U651 963 aa22.08■■□□□ 1.13
AL954642.1-201ENST00000428088 NFRKBQ6P4R8 1299 aa22.08■■□□□ 1.13
AL954642.1-201ENST00000428088 VSIG10LQ86VR7 867 aa22.08■■□□□ 1.13
AL954642.1-201ENST00000428088 TMTC2Q8N394 836 aa22.08■■□□□ 1.13
AL954642.1-201ENST00000428088 SCLYQ96I15 445 aa22.08■■□□□ 1.13
AL954642.1-201ENST00000428088 ZFP91Q96JP5 570 aaPredicted RBP22.08■■□□□ 1.13
AL954642.1-201ENST00000428088 TMEM87BQ96K49 555 aa22.08■■□□□ 1.13
AL954642.1-201ENST00000428088 CDX2Q99626 313 aaPredicted RBP22.08■■□□□ 1.13
AL954642.1-201ENST00000428088 LRRC2Q9BYS8 371 aa22.08■■□□□ 1.13
AL954642.1-201ENST00000428088 UNC80Q8N2C7 3258 aa22.08■■□□□ 1.12
AL954642.1-201ENST00000428088 SCN5AQ14524 2016 aa22.07■■□□□ 1.12
AL954642.1-201ENST00000428088 GRXCR1A8MXD5 290 aa22.07■■□□□ 1.12
AL954642.1-201ENST00000428088 FGBP02675 491 aa22.07■■□□□ 1.12
AL954642.1-201ENST00000428088 RXRAP19793 462 aa22.07■■□□□ 1.12
AL954642.1-201ENST00000428088 RAB11FIP4Q86YS3 637 aa22.07■■□□□ 1.12
AL954642.1-201ENST00000428088 SPZ1Q9BXG8 430 aa22.07■■□□□ 1.12
AL954642.1-201ENST00000428088 TRIP12Q14669 1992 aaPredicted RBP22.07■■□□□ 1.12
AL954642.1-201ENST00000428088 SORBS3O60504 671 aa22.06■■□□□ 1.12
AL954642.1-201ENST00000428088 PLEKHA8P1O95397 391 aa22.06■■□□□ 1.12
AL954642.1-201ENST00000428088 CASTP20810 708 aaKnown RBP22.06■■□□□ 1.12
AL954642.1-201ENST00000428088 DNAJB2P25686 324 aa22.06■■□□□ 1.12
AL954642.1-201ENST00000428088 LIFRP42702 1097 aa22.06■■□□□ 1.12
AL954642.1-201ENST00000428088 OTOP2Q7RTS6 562 aa22.06■■□□□ 1.12
AL954642.1-201ENST00000428088 CMTR1Q8N1G2 835 aaKnown RBP22.06■■□□□ 1.12
AL954642.1-201ENST00000428088 HERVK_113Q902F9 699 aa22.06■■□□□ 1.12
AL954642.1-201ENST00000428088 KAT2BQ92831 832 aa22.06■■□□□ 1.12
AL954642.1-201ENST00000428088 RRP36Q96EU6 259 aaKnown RBP22.06■■□□□ 1.12
AL954642.1-201ENST00000428088 CXXC1Q9P0U4 656 aaPredicted RBP22.06■■□□□ 1.12
AL954642.1-201ENST00000428088 PRUNE2Q8WUY3 3088 aa22.05■■□□□ 1.12
AL954642.1-201ENST00000428088 CCND2P30279 289 aa22.05■■□□□ 1.12
AL954642.1-201ENST00000428088 PTPN11Q06124 597 aaPredicted RBP22.05■■□□□ 1.12
AL954642.1-201ENST00000428088 LAMC2Q13753 1193 aa22.05■■□□□ 1.12
AL954642.1-201ENST00000428088 DGKDQ16760 1214 aa22.05■■□□□ 1.12
AL954642.1-201ENST00000428088 DHX37Q8IY37 1157 aaKnown RBP22.05■■□□□ 1.12
AL954642.1-201ENST00000428088 RPUSD2Q8IZ73 545 aaKnown RBP22.05■■□□□ 1.12
AL954642.1-201ENST00000428088 SRBD1Q8N5C6 995 aaKnown RBP22.05■■□□□ 1.12
AL954642.1-201ENST00000428088 EMID1Q96A84 441 aaPredicted RBP22.05■■□□□ 1.12
AL954642.1-201ENST00000428088 VWCEQ96DN2 955 aa22.05■■□□□ 1.12
AL954642.1-201ENST00000428088 LZTS2Q9BRK4 669 aa22.05■■□□□ 1.12
AL954642.1-201ENST00000428088 SMARCA1P28370 1054 aa22.04■■□□□ 1.12
AL954642.1-201ENST00000428088 PBX2P40425 430 aa22.04■■□□□ 1.12
AL954642.1-201ENST00000428088 GNAQP50148 359 aa22.04■■□□□ 1.12
AL954642.1-201ENST00000428088 SP2Q02086 613 aa22.04■■□□□ 1.12
AL954642.1-201ENST00000428088 MYLIPQ8WY64 445 aa22.04■■□□□ 1.12
AL954642.1-201ENST00000428088 GPKOWQ92917 476 aaPredicted RBP eCLIP22.04■■□□□ 1.12
AL954642.1-201ENST00000428088 PBX4Q9BYU1 374 aa22.04■■□□□ 1.12
AL954642.1-201ENST00000428088 SEC63Q9UGP8 760 aaKnown RBP22.04■■□□□ 1.12
AL954642.1-201ENST00000428088 NOD1Q9Y239 953 aa22.04■■□□□ 1.12
AL954642.1-201ENST00000428088 SLC12A7Q9Y666 1083 aa22.04■■□□□ 1.12
AL954642.1-201ENST00000428088 GBF1Q92538 1859 aa22.03■■□□□ 1.12
AL954642.1-201ENST00000428088 TMEM265A0A087WTH1 108 aa22.03■■□□□ 1.12
AL954642.1-201ENST00000428088 RNF20Q5VTR2 975 aa22.03■■□□□ 1.12
AL954642.1-201ENST00000428088 MYSM1Q5VVJ2 828 aa22.03■■□□□ 1.12
AL954642.1-201ENST00000428088 KCNV1Q6PIU1 500 aa22.03■■□□□ 1.12
AL954642.1-201ENST00000428088 PPTC7Q8NI37 304 aa22.03■■□□□ 1.12
AL954642.1-201ENST00000428088 MTIF3Q9H2K0 278 aaKnown RBP22.03■■□□□ 1.12
AL954642.1-201ENST00000428088 MYO9BQ13459 2157 aa22.02■■□□□ 1.12
AL954642.1-201ENST00000428088 CHD9Q3L8U1 2897 aa22.02■■□□□ 1.12
AL954642.1-201ENST00000428088 CDC45O75419 566 aa22.02■■□□□ 1.12
AL954642.1-201ENST00000428088 GGPS1O95749 300 aa22.02■■□□□ 1.12
AL954642.1-201ENST00000428088 ZNF286BP0CG31 522 aa22.02■■□□□ 1.12
AL954642.1-201ENST00000428088 CALM1P0DP23 149 aa22.02■■□□□ 1.12
AL954642.1-201ENST00000428088 CALM2P0DP24 149 aa22.02■■□□□ 1.12
AL954642.1-201ENST00000428088 CALM3P0DP25 149 aa22.02■■□□□ 1.12
AL954642.1-201ENST00000428088 PTGISQ16647 500 aa22.02■■□□□ 1.12
AL954642.1-201ENST00000428088 CELF3Q5SZQ8 465 aaKnown RBP22.02■■□□□ 1.12
AL954642.1-201ENST00000428088 GDF6Q6KF10 455 aaPredicted RBP22.02■■□□□ 1.12
AL954642.1-201ENST00000428088 USP17L6PQ6QN14 398 aa22.02■■□□□ 1.12
AL954642.1-201ENST00000428088 DEFB128Q7Z7B8 93 aa22.02■■□□□ 1.12
AL954642.1-201ENST00000428088 CCDC82Q8N4S0 544 aa22.02■■□□□ 1.12
AL954642.1-201ENST00000428088 SMARCC2Q8TAQ2 1214 aa22.02■■□□□ 1.12
AL954642.1-201ENST00000428088 TIFAQ96CG3 184 aa22.02■■□□□ 1.12
AL954642.1-201ENST00000428088 NEK1Q96PY6 1258 aa22.02■■□□□ 1.12
AL954642.1-201ENST00000428088 ALG1Q9BT22 464 aa22.02■■□□□ 1.12
AL954642.1-201ENST00000428088 DOCK5Q9H7D0 1870 aa22.01■■□□□ 1.11
AL954642.1-201ENST00000428088 hCG_1642624A0A1W2PR95 340 aa22.01■■□□□ 1.11
AL954642.1-201ENST00000428088 TGFB3P10600 412 aa22.01■■□□□ 1.11
AL954642.1-201ENST00000428088 UBA1P22314 1058 aaKnown RBP22.01■■□□□ 1.11
AL954642.1-201ENST00000428088 PSEN2P49810 448 aa22.01■■□□□ 1.11
AL954642.1-201ENST00000428088 MRPS9P82933 396 aaKnown RBP22.01■■□□□ 1.11
AL954642.1-201ENST00000428088 GRIN2CQ14957 1233 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms