RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 GHRHRQ02643 423 aa10.96□□□□□ -0.65
NUP50-205ENST00000419387 TRAF1Q13077 416 aa10.96□□□□□ -0.65
NUP50-205ENST00000419387 LY6KQ17RY6 165 aa10.96□□□□□ -0.65
NUP50-205ENST00000419387 NFRKBQ6P4R8 1299 aa10.96□□□□□ -0.65
NUP50-205ENST00000419387 STOX1Q6ZVD7 989 aa10.96□□□□□ -0.65
NUP50-205ENST00000419387 CHST3Q7LGC8 479 aa10.96□□□□□ -0.65
NUP50-205ENST00000419387 RPUSD2Q8IZ73 545 aaKnown RBP10.96□□□□□ -0.65
NUP50-205ENST00000419387 IGDCC4Q8TDY8 1250 aa10.96□□□□□ -0.65
NUP50-205ENST00000419387 HERVK_113Q902F9 699 aa10.96□□□□□ -0.65
NUP50-205ENST00000419387 WNT8AQ9H1J5 351 aa10.96□□□□□ -0.65
NUP50-205ENST00000419387 SENP2Q9HC62 589 aa10.96□□□□□ -0.65
NUP50-205ENST00000419387 PXMP2Q9NR77 195 aa10.96□□□□□ -0.65
NUP50-205ENST00000419387 TRMT13Q9NUP7 481 aaKnown RBP10.96□□□□□ -0.65
NUP50-205ENST00000419387 PCDHA1Q9Y5I3 950 aa10.96□□□□□ -0.65
NUP50-205ENST00000419387 TAF6LQ9Y6J9 622 aa10.96□□□□□ -0.65
NUP50-205ENST00000419387 CYP2C9P11712 490 aa10.95□□□□□ -0.66
NUP50-205ENST00000419387 ANTXR2P58335 489 aa10.95□□□□□ -0.66
NUP50-205ENST00000419387 PTPN11Q06124 597 aaPredicted RBP10.95□□□□□ -0.66
NUP50-205ENST00000419387 TROAPQ12815 778 aa10.95□□□□□ -0.66
NUP50-205ENST00000419387 SLC35G1Q2M3R5 365 aa10.95□□□□□ -0.66
NUP50-205ENST00000419387 FAM47CQ5HY64 1035 aa10.95□□□□□ -0.66
NUP50-205ENST00000419387 TMEM67Q5HYA8 995 aa10.95□□□□□ -0.66
NUP50-205ENST00000419387 LCE2DQ5TA82 110 aaPredicted RBP10.95□□□□□ -0.66
NUP50-205ENST00000419387 HOMER1Q86YM7 354 aa10.95□□□□□ -0.66
NUP50-205ENST00000419387 MB21D2Q8IYB1 491 aaPredicted RBP10.95□□□□□ -0.66
NUP50-205ENST00000419387 AFG1LQ8WV93 481 aa10.95□□□□□ -0.66
NUP50-205ENST00000419387 MYLIPQ8WY64 445 aa10.95□□□□□ -0.66
NUP50-205ENST00000419387 PIGSQ96S52 555 aa10.95□□□□□ -0.66
NUP50-205ENST00000419387 MTIF3Q9H2K0 278 aaKnown RBP10.95□□□□□ -0.66
NUP50-205ENST00000419387 DDX41Q9UJV9 622 aaKnown RBP10.95□□□□□ -0.66
NUP50-205ENST00000419387 RBM8AQ9Y5S9 174 aaKnown RBP10.95□□□□□ -0.66
NUP50-205ENST00000419387 PNMA6FA0A0J9YX94 578 aa10.94□□□□□ -0.66
NUP50-205ENST00000419387 GRXCR1A8MXD5 290 aa10.94□□□□□ -0.66
NUP50-205ENST00000419387 DLL1O00548 723 aa10.94□□□□□ -0.66
NUP50-205ENST00000419387 CYTH3O43739 400 aa10.94□□□□□ -0.66
NUP50-205ENST00000419387 MMP3P08254 477 aa10.94□□□□□ -0.66
NUP50-205ENST00000419387 CASTP20810 708 aaKnown RBP10.94□□□□□ -0.66
NUP50-205ENST00000419387 ARHGAP1Q07960 439 aa10.94□□□□□ -0.66
NUP50-205ENST00000419387 GRIN2CQ14957 1233 aa10.94□□□□□ -0.66
NUP50-205ENST00000419387 OTOP2Q7RTS6 562 aa10.94□□□□□ -0.66
NUP50-205ENST00000419387 CATIPQ7Z7H3 387 aa10.94□□□□□ -0.66
NUP50-205ENST00000419387 PPP1R13LQ8WUF5 828 aa10.94□□□□□ -0.66
NUP50-205ENST00000419387 TIFAQ96CG3 184 aa10.94□□□□□ -0.66
NUP50-205ENST00000419387 SCLYQ96I15 445 aa10.94□□□□□ -0.66
NUP50-205ENST00000419387 PDCD2LQ9BRP1 358 aa10.94□□□□□ -0.66
NUP50-205ENST00000419387 MTA3Q9BTC8 594 aa10.94□□□□□ -0.66
NUP50-205ENST00000419387 PBX4Q9BYU1 374 aa10.94□□□□□ -0.66
NUP50-205ENST00000419387 ZNF576Q9H609 170 aa10.94□□□□□ -0.66
NUP50-205ENST00000419387 CXXC1Q9P0U4 656 aaPredicted RBP10.94□□□□□ -0.66
NUP50-205ENST00000419387 MRVI1Q9Y6F6 885 aa10.94□□□□□ -0.66
NUP50-205ENST00000419387 COL6A3P12111 3177 aa10.93□□□□□ -0.66
NUP50-205ENST00000419387 TTLL13PA6NNM8 815 aa10.93□□□□□ -0.66
NUP50-205ENST00000419387 GCOM1H8Y6P7 765 aaPredicted RBP10.93□□□□□ -0.66
NUP50-205ENST00000419387 SEC24BO95487 1268 aa10.93□□□□□ -0.66
NUP50-205ENST00000419387 POLR2MP0CAP2 368 aa10.93□□□□□ -0.66
NUP50-205ENST00000419387 MYCLP12524 364 aaPredicted RBP10.93□□□□□ -0.66
NUP50-205ENST00000419387 HOXA13P31271 388 aaPredicted RBP10.93□□□□□ -0.66
NUP50-205ENST00000419387 PBX2P40425 430 aa10.93□□□□□ -0.66
NUP50-205ENST00000419387 CHMP4BP1P59074 171 aa10.93□□□□□ -0.66
NUP50-205ENST00000419387 LAMC2Q13753 1193 aa10.93□□□□□ -0.66
NUP50-205ENST00000419387 PGM5Q15124 567 aa10.93□□□□□ -0.66
NUP50-205ENST00000419387 DGKDQ16760 1214 aa10.93□□□□□ -0.66
NUP50-205ENST00000419387 CASC1Q6TDU7 716 aa10.93□□□□□ -0.66
NUP50-205ENST00000419387 VSIG10LQ86VR7 867 aa10.93□□□□□ -0.66
NUP50-205ENST00000419387 DHX37Q8IY37 1157 aaKnown RBP10.93□□□□□ -0.66
NUP50-205ENST00000419387 TMTC2Q8N394 836 aa10.93□□□□□ -0.66
NUP50-205ENST00000419387 RETREG2Q8NC44 543 aa10.93□□□□□ -0.66
NUP50-205ENST00000419387 MAFAQ8NHW3 353 aaPredicted RBP10.93□□□□□ -0.66
NUP50-205ENST00000419387 EMID1Q96A84 441 aaPredicted RBP10.93□□□□□ -0.66
NUP50-205ENST00000419387 VWCEQ96DN2 955 aa10.93□□□□□ -0.66
NUP50-205ENST00000419387 MAP3K14Q99558 947 aa10.93□□□□□ -0.66
NUP50-205ENST00000419387 LSG1Q9H089 658 aaKnown RBP10.93□□□□□ -0.66
NUP50-205ENST00000419387 LY9Q9HBG7 655 aa10.93□□□□□ -0.66
NUP50-205ENST00000419387 MSRAQ9UJ68 235 aa10.93□□□□□ -0.66
NUP50-205ENST00000419387 MYH6P13533 1939 aa10.93□□□□□ -0.66
NUP50-205ENST00000419387 SCN10AQ9Y5Y9 1956 aa10.92□□□□□ -0.66
NUP50-205ENST00000419387 PRC1O43663 620 aa10.92□□□□□ -0.66
NUP50-205ENST00000419387 RGS20O76081 388 aa10.92□□□□□ -0.66
NUP50-205ENST00000419387 PFKMP08237 780 aa10.92□□□□□ -0.66
NUP50-205ENST00000419387 FOSL2P15408 326 aa10.92□□□□□ -0.66
NUP50-205ENST00000419387 SMARCA1P28370 1054 aa10.92□□□□□ -0.66
NUP50-205ENST00000419387 MCM5P33992 734 aa10.92□□□□□ -0.66
NUP50-205ENST00000419387 RFC2P35250 354 aa10.92□□□□□ -0.66
NUP50-205ENST00000419387 RAB30Q15771 203 aa10.92□□□□□ -0.66
NUP50-205ENST00000419387 KCNV1Q6PIU1 500 aa10.92□□□□□ -0.66
NUP50-205ENST00000419387 SESTD1Q86VW0 696 aa10.92□□□□□ -0.66
NUP50-205ENST00000419387 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.92□□□□□ -0.66
NUP50-205ENST00000419387 ZNF654Q8IZM8 581 aa10.92□□□□□ -0.66
NUP50-205ENST00000419387 PLCD3Q8N3E9 789 aa10.92□□□□□ -0.66
NUP50-205ENST00000419387 CTCFLQ8NI51 663 aaPredicted RBP10.92□□□□□ -0.66
NUP50-205ENST00000419387 KAT2BQ92831 832 aa10.92□□□□□ -0.66
NUP50-205ENST00000419387 ESYT1Q9BSJ8 1104 aa10.92□□□□□ -0.66
NUP50-205ENST00000419387 NOD1Q9Y239 953 aa10.92□□□□□ -0.66
NUP50-205ENST00000419387 ZBBXA8MT70 800 aa10.91□□□□□ -0.66
NUP50-205ENST00000419387 SLC27A2O14975 620 aa10.91□□□□□ -0.66
NUP50-205ENST00000419387 DDAH1O94760 285 aa10.91□□□□□ -0.66
NUP50-205ENST00000419387 IQCF3P0C7M6 154 aa10.91□□□□□ -0.66
NUP50-205ENST00000419387 TGFB3P10600 412 aa10.91□□□□□ -0.66
NUP50-205ENST00000419387 CCND2P30279 289 aa10.91□□□□□ -0.66
NUP50-205ENST00000419387 KIF5BP33176 963 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms