RNA–Protein interactions for RNA: ENST00000418309.1

LINC01006-202, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 3 BASIC

Gene LINC01006, Length 640 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-202ENST00000418309 CASTP20810 708 aaKnown RBP16.41■□□□□ 0.22
LINC01006-202ENST00000418309 ARHGAP1Q07960 439 aa16.41■□□□□ 0.22
LINC01006-202ENST00000418309 GRM4Q14833 912 aa16.41■□□□□ 0.22
LINC01006-202ENST00000418309 MTMR8Q96EF0 704 aa16.41■□□□□ 0.22
LINC01006-202ENST00000418309 PIGSQ96S52 555 aa16.41■□□□□ 0.22
LINC01006-202ENST00000418309 COL25A1Q9BXS0 654 aaPredicted RBP16.41■□□□□ 0.22
LINC01006-202ENST00000418309 PRDM12Q9H4Q4 367 aa16.41■□□□□ 0.22
LINC01006-202ENST00000418309 SLC28A3Q9HAS3 691 aa16.41■□□□□ 0.22
LINC01006-202ENST00000418309 DDX41Q9UJV9 622 aaKnown RBP16.41■□□□□ 0.22
LINC01006-202ENST00000418309 A0A0C4DFX4 3053 aa16.41■□□□□ 0.22
LINC01006-202ENST00000418309 BAZ2BQ9UIF8 2168 aaKnown RBP16.4■□□□□ 0.22
LINC01006-202ENST00000418309 OPLAHO14841 1288 aa16.4■□□□□ 0.22
LINC01006-202ENST00000418309 SGSM2O43147 1006 aa16.4■□□□□ 0.22
LINC01006-202ENST00000418309 PPP1R11O60927 126 aaPredicted RBP16.4■□□□□ 0.22
LINC01006-202ENST00000418309 PFKMP08237 780 aa16.4■□□□□ 0.22
LINC01006-202ENST00000418309 ACTN1P12814 892 aa16.4■□□□□ 0.22
LINC01006-202ENST00000418309 HOXA13P31271 388 aaPredicted RBP16.4■□□□□ 0.22
LINC01006-202ENST00000418309 HSD17B4P51659 736 aa16.4■□□□□ 0.22
LINC01006-202ENST00000418309 RABGGTBP53611 331 aa16.4■□□□□ 0.22
LINC01006-202ENST00000418309 TRAF1Q13077 416 aa16.4■□□□□ 0.22
LINC01006-202ENST00000418309 BFSP2Q13515 415 aa16.4■□□□□ 0.22
LINC01006-202ENST00000418309 PTGISQ16647 500 aa16.4■□□□□ 0.22
LINC01006-202ENST00000418309 DGKDQ16760 1214 aa16.4■□□□□ 0.22
LINC01006-202ENST00000418309 TMEM67Q5HYA8 995 aa16.4■□□□□ 0.22
LINC01006-202ENST00000418309 CATIPQ7Z7H3 387 aa16.4■□□□□ 0.22
LINC01006-202ENST00000418309 PPM1EQ8WY54 764 aa16.4■□□□□ 0.22
LINC01006-202ENST00000418309 FTOQ9C0B1 505 aaKnown RBP eCLIP16.4■□□□□ 0.225e-7■■□□□ 13.1
LINC01006-202ENST00000418309 SENP2Q9HC62 589 aa16.4■□□□□ 0.22
LINC01006-202ENST00000418309 MAP3K20Q9NYL2 800 aaKnown RBP16.4■□□□□ 0.22
LINC01006-202ENST00000418309 TAF6LQ9Y6J9 622 aa16.4■□□□□ 0.22
LINC01006-202ENST00000418309 MYH7BA7E2Y1 1941 aa16.4■□□□□ 0.22
LINC01006-202ENST00000418309 SCN5AQ14524 2016 aa16.4■□□□□ 0.22
LINC01006-202ENST00000418309 GCOM1H8Y6P7 765 aaPredicted RBP16.39■□□□□ 0.21
LINC01006-202ENST00000418309 IQCF3P0C7M6 154 aa16.39■□□□□ 0.21
LINC01006-202ENST00000418309 POLR2MP0CAP2 368 aa16.39■□□□□ 0.21
LINC01006-202ENST00000418309 ATXN8OSP0DMR3 200 aa16.39■□□□□ 0.21
LINC01006-202ENST00000418309 ATP2A2P16615 1042 aaKnown RBP16.39■□□□□ 0.21
LINC01006-202ENST00000418309 RFC2P35250 354 aa16.39■□□□□ 0.21
LINC01006-202ENST00000418309 LAMC2Q13753 1193 aa16.39■□□□□ 0.21
LINC01006-202ENST00000418309 FCHSD1Q86WN1 690 aa16.39■□□□□ 0.21
LINC01006-202ENST00000418309 DHX37Q8IY37 1157 aaKnown RBP16.39■□□□□ 0.21
LINC01006-202ENST00000418309 SAMD3Q8N6K7 520 aa16.39■□□□□ 0.21
LINC01006-202ENST00000418309 PIBF1Q8WXW3 757 aa16.39■□□□□ 0.21
LINC01006-202ENST00000418309 PDCD2LQ9BRP1 358 aa16.39■□□□□ 0.21
LINC01006-202ENST00000418309 RIOX1Q9H6W3 641 aa16.39■□□□□ 0.21
LINC01006-202ENST00000418309 YBX2Q9Y2T7 364 aaKnown RBP16.39■□□□□ 0.21
LINC01006-202ENST00000418309 GBF1Q92538 1859 aa16.38■□□□□ 0.21
LINC01006-202ENST00000418309 PNMA6FA0A0J9YX94 578 aa16.38■□□□□ 0.21
LINC01006-202ENST00000418309 PITPNM1O00562 1244 aa16.38■□□□□ 0.21
LINC01006-202ENST00000418309 SORBS3O60504 671 aa16.38■□□□□ 0.21
LINC01006-202ENST00000418309 IGFBP4P22692 258 aa16.38■□□□□ 0.21
LINC01006-202ENST00000418309 PGM5Q15124 567 aa16.38■□□□□ 0.21
LINC01006-202ENST00000418309 STOX1Q6ZVD7 989 aa16.38■□□□□ 0.21
LINC01006-202ENST00000418309 CCDC155Q8N6L0 562 aa16.38■□□□□ 0.21
LINC01006-202ENST00000418309 MAP4K1Q92918 833 aa16.38■□□□□ 0.21
LINC01006-202ENST00000418309 VWCEQ96DN2 955 aa16.38■□□□□ 0.21
LINC01006-202ENST00000418309 ALG1Q9BT22 464 aa16.38■□□□□ 0.21
LINC01006-202ENST00000418309 RBM8AQ9Y5S9 174 aaKnown RBP16.38■□□□□ 0.21
LINC01006-202ENST00000418309 TRIP12Q14669 1992 aaPredicted RBP16.38■□□□□ 0.21
LINC01006-202ENST00000418309 CYTH3O43739 400 aa16.37■□□□□ 0.21
LINC01006-202ENST00000418309 MYOGP15173 224 aa16.37■□□□□ 0.21
LINC01006-202ENST00000418309 PSEN2P49810 448 aa16.37■□□□□ 0.21
LINC01006-202ENST00000418309 GHRHRQ02643 423 aa16.37■□□□□ 0.21
LINC01006-202ENST00000418309 TROAPQ12815 778 aa16.37■□□□□ 0.21
LINC01006-202ENST00000418309 SLC35G1Q2M3R5 365 aa16.37■□□□□ 0.21
LINC01006-202ENST00000418309 PPP2R2DQ66LE6 453 aa16.37■□□□□ 0.21
LINC01006-202ENST00000418309 GDF6Q6KF10 455 aaPredicted RBP16.37■□□□□ 0.21
LINC01006-202ENST00000418309 KCNV1Q6PIU1 500 aa16.37■□□□□ 0.21
LINC01006-202ENST00000418309 CASC1Q6TDU7 716 aa16.37■□□□□ 0.21
LINC01006-202ENST00000418309 C7orf31Q8N865 590 aa16.37■□□□□ 0.21
LINC01006-202ENST00000418309 KAT2BQ92831 832 aa16.37■□□□□ 0.21
LINC01006-202ENST00000418309 EMID1Q96A84 441 aaPredicted RBP16.37■□□□□ 0.21
LINC01006-202ENST00000418309 ZFP91Q96JP5 570 aaPredicted RBP16.37■□□□□ 0.21
LINC01006-202ENST00000418309 KATNAL1Q9BW62 490 aa16.37■□□□□ 0.21
LINC01006-202ENST00000418309 PCDHA11Q9Y5I1 949 aa16.37■□□□□ 0.21
LINC01006-202ENST00000418309 ZNF286BP0CG31 522 aa16.36■□□□□ 0.21
LINC01006-202ENST00000418309 CCND2P30279 289 aa16.36■□□□□ 0.21
LINC01006-202ENST00000418309 ANTXR2P58335 489 aa16.36■□□□□ 0.21
LINC01006-202ENST00000418309 VSIG10LQ86VR7 867 aa16.36■□□□□ 0.21
LINC01006-202ENST00000418309 SESTD1Q86VW0 696 aa16.36■□□□□ 0.21
LINC01006-202ENST00000418309 USP38Q8NB14 1042 aa16.36■□□□□ 0.21
LINC01006-202ENST00000418309 PPTC7Q8NI37 304 aa16.36■□□□□ 0.21
LINC01006-202ENST00000418309 CAGE1Q8TC20 777 aa16.36■□□□□ 0.21
LINC01006-202ENST00000418309 IGDCC4Q8TDY8 1250 aa16.36■□□□□ 0.21
LINC01006-202ENST00000418309 HDAC6Q9UBN7 1215 aa16.36■□□□□ 0.21
LINC01006-202ENST00000418309 UNC80Q8N2C7 3258 aa16.36■□□□□ 0.21
LINC01006-202ENST00000418309 RGS20O76081 388 aa16.35■□□□□ 0.21
LINC01006-202ENST00000418309 GGPS1O95749 300 aa16.35■□□□□ 0.21
LINC01006-202ENST00000418309 MFSD10Q14728 455 aa16.35■□□□□ 0.21
LINC01006-202ENST00000418309 CCDC85BQ15834 202 aaPredicted RBP16.35■□□□□ 0.21
LINC01006-202ENST00000418309 KIAA0753Q2KHM9 967 aa16.35■□□□□ 0.21
LINC01006-202ENST00000418309 CELF3Q5SZQ8 465 aaKnown RBP16.35■□□□□ 0.21
LINC01006-202ENST00000418309 MYSM1Q5VVJ2 828 aa16.35■□□□□ 0.21
LINC01006-202ENST00000418309 NFXL1Q6ZNB6 911 aa16.35■□□□□ 0.21
LINC01006-202ENST00000418309 MB21D2Q8IYB1 491 aaPredicted RBP16.35■□□□□ 0.21
LINC01006-202ENST00000418309 IL31RAQ8NI17 732 aa16.35■□□□□ 0.21
LINC01006-202ENST00000418309 CTCFLQ8NI51 663 aaPredicted RBP16.35■□□□□ 0.21
LINC01006-202ENST00000418309 SPATA33Q96N06 139 aa16.35■□□□□ 0.21
LINC01006-202ENST00000418309 MLXIPQ9HAP2 919 aa16.35■□□□□ 0.21
LINC01006-202ENST00000418309 GTF2IRD1Q9UHL9 959 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms