RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 HOOK2Q96ED9 719 aa5.31□□□□□ -1.56
SF3B1-202ENST00000409915 MTMR8Q96EF0 704 aa5.31□□□□□ -1.56
SF3B1-202ENST00000409915 FAM84BQ96KN1 310 aaPredicted RBP5.31□□□□□ -1.56
SF3B1-202ENST00000409915 C1QTNF2Q9BXJ5 285 aa5.31□□□□□ -1.56
SF3B1-202ENST00000409915 COA1Q9GZY4 146 aa5.31□□□□□ -1.56
SF3B1-202ENST00000409915 VPS33BQ9H267 617 aa5.31□□□□□ -1.56
SF3B1-202ENST00000409915 TAF1DQ9H5J8 278 aaPredicted RBP5.31□□□□□ -1.56
SF3B1-202ENST00000409915 ZFAND3Q9H8U3 227 aa5.31□□□□□ -1.56
SF3B1-202ENST00000409915 CD209Q9NNX6 404 aa5.31□□□□□ -1.56
SF3B1-202ENST00000409915 NPHS2Q9NP85 383 aa5.31□□□□□ -1.56
SF3B1-202ENST00000409915 ZBTB40Q9NUA8 1239 aa5.31□□□□□ -1.56
SF3B1-202ENST00000409915 GPRC5DQ9NZD1 345 aa5.31□□□□□ -1.56
SF3B1-202ENST00000409915 LUZP4Q9P127 313 aa5.31□□□□□ -1.56
SF3B1-202ENST00000409915 HACL1Q9UJ83 578 aa5.31□□□□□ -1.56
SF3B1-202ENST00000409915 FOXD3Q9UJU5 478 aaPredicted RBP5.31□□□□□ -1.56
SF3B1-202ENST00000409915 EXOC6BQ9Y2D4 811 aa5.31□□□□□ -1.56
SF3B1-202ENST00000409915 ZNF646O15015 1829 aaPredicted RBP5.31□□□□□ -1.56
SF3B1-202ENST00000409915 COL1A1P02452 1464 aaPredicted RBP5.31□□□□□ -1.56
SF3B1-202ENST00000409915 IQCA1LA6NCM1 817 aa5.3□□□□□ -1.56
SF3B1-202ENST00000409915 F8W031 263 aaPredicted RBP5.3□□□□□ -1.56
SF3B1-202ENST00000409915 TULP2O00295 520 aa5.3□□□□□ -1.56
SF3B1-202ENST00000409915 GADD45BO75293 160 aaPredicted RBP5.3□□□□□ -1.56
SF3B1-202ENST00000409915 RNASEH2AO75792 299 aaKnown RBP5.3□□□□□ -1.56
SF3B1-202ENST00000409915 SASH1O94885 1247 aa5.3□□□□□ -1.56
SF3B1-202ENST00000409915 ADH1CP00326 375 aa5.3□□□□□ -1.56
SF3B1-202ENST00000409915 INHAP05111 366 aa5.3□□□□□ -1.56
SF3B1-202ENST00000409915 IFIT1P09914 478 aaKnown RBP5.3□□□□□ -1.56
SF3B1-202ENST00000409915 SLC5A1P13866 664 aa5.3□□□□□ -1.56
SF3B1-202ENST00000409915 TIMP2P16035 220 aa5.3□□□□□ -1.56
SF3B1-202ENST00000409915 FGFR2P21802 821 aa5.3□□□□□ -1.56
SF3B1-202ENST00000409915 IL15P40933 162 aaPredicted RBP5.3□□□□□ -1.56
SF3B1-202ENST00000409915 CASP2P42575 452 aa5.3□□□□□ -1.56
SF3B1-202ENST00000409915 PHKA1P46020 1223 aa5.3□□□□□ -1.56
SF3B1-202ENST00000409915 ITKQ08881 620 aa5.3□□□□□ -1.56
SF3B1-202ENST00000409915 G3BP1Q13283 466 aaKnown RBP eCLIP5.3□□□□□ -1.56
SF3B1-202ENST00000409915 PABPC4Q13310 644 aaKnown RBP eCLIP5.3□□□□□ -1.56
SF3B1-202ENST00000409915 PICALMQ13492 652 aa5.3□□□□□ -1.56
SF3B1-202ENST00000409915 GRIN2CQ14957 1233 aa5.3□□□□□ -1.56
SF3B1-202ENST00000409915 TNIP1Q15025 636 aa5.3□□□□□ -1.56
SF3B1-202ENST00000409915 SETDB1Q15047 1291 aa5.3□□□□□ -1.56
SF3B1-202ENST00000409915 MAP3K11Q16584 847 aa5.3□□□□□ -1.56
SF3B1-202ENST00000409915 C11orf91Q3C1V1 193 aa5.3□□□□□ -1.56
SF3B1-202ENST00000409915 TBC1D10BQ4KMP7 808 aaPredicted RBP5.3□□□□□ -1.56
SF3B1-202ENST00000409915 HS1BP3Q53T59 392 aa5.3□□□□□ -1.56
SF3B1-202ENST00000409915 TMEM67Q5HYA8 995 aa5.3□□□□□ -1.56
SF3B1-202ENST00000409915 DACT2Q5SW24 774 aa5.3□□□□□ -1.56
SF3B1-202ENST00000409915 MAP1SQ66K74 1059 aaPredicted RBP5.3□□□□□ -1.56
SF3B1-202ENST00000409915 C15orf52Q6ZUT6 534 aaKnown RBP5.3□□□□□ -1.56
SF3B1-202ENST00000409915 ZBTB46Q86UZ6 589 aa5.3□□□□□ -1.56
SF3B1-202ENST00000409915 PASD1Q8IV76 773 aa5.3□□□□□ -1.56
SF3B1-202ENST00000409915 CERS5Q8N5B7 392 aa5.3□□□□□ -1.56
SF3B1-202ENST00000409915 CCDC89Q8N998 374 aa5.3□□□□□ -1.56
SF3B1-202ENST00000409915 KIFC2Q96AC6 838 aa5.3□□□□□ -1.56
SF3B1-202ENST00000409915 RHOVQ96L33 236 aa5.3□□□□□ -1.56
SF3B1-202ENST00000409915 TRIM47Q96LD4 638 aa5.3□□□□□ -1.56
SF3B1-202ENST00000409915 TLR7Q9NYK1 1049 aaKnown RBP5.3□□□□□ -1.56
SF3B1-202ENST00000409915 SCHIP1Q9P0W5 487 aaPredicted RBP5.3□□□□□ -1.56
SF3B1-202ENST00000409915 USP25Q9UHP3 1055 aa5.3□□□□□ -1.56
SF3B1-202ENST00000409915 CNOT7Q9UIV1 285 aaKnown RBP5.3□□□□□ -1.56
SF3B1-202ENST00000409915 ZMYM5Q9UJ78 669 aa5.3□□□□□ -1.56
SF3B1-202ENST00000409915 ZNF180Q9UJW8 692 aa5.3□□□□□ -1.56
SF3B1-202ENST00000409915 GTF2A1LQ9UNN4 478 aa5.3□□□□□ -1.56
SF3B1-202ENST00000409915 SCAF8Q9UPN6 1271 aaKnown RBP5.3□□□□□ -1.56
SF3B1-202ENST00000409915 CEP350Q5VT06 3117 aa5.3□□□□□ -1.56
SF3B1-202ENST00000409915 ADAMTSL1Q8N6G6 1762 aa5.29□□□□□ -1.56
SF3B1-202ENST00000409915 ASTN2O75129 1339 aaPredicted RBP5.29□□□□□ -1.56
SF3B1-202ENST00000409915 ARAP2Q8WZ64 1704 aa5.29□□□□□ -1.56
SF3B1-202ENST00000409915 A0A1B0GUL7 405 aa5.29□□□□□ -1.56
SF3B1-202ENST00000409915 RASSF10A6NK89 507 aa5.29□□□□□ -1.56
SF3B1-202ENST00000409915 SOBPA7XYQ1 873 aa5.29□□□□□ -1.56
SF3B1-202ENST00000409915 GSG1L2A8MUP6 293 aa5.29□□□□□ -1.56
SF3B1-202ENST00000409915 GREM1O60565 184 aa5.29□□□□□ -1.56
SF3B1-202ENST00000409915 FRAT2O75474 233 aaPredicted RBP5.29□□□□□ -1.56
SF3B1-202ENST00000409915 TOMM70O94826 608 aa5.29□□□□□ -1.56
SF3B1-202ENST00000409915 ZRANB2O95218 330 aaKnown RBP eCLIP5.29□□□□□ -1.56
SF3B1-202ENST00000409915 RPLP1P05386 114 aaKnown RBP5.29□□□□□ -1.56
SF3B1-202ENST00000409915 VDRP11473 427 aa5.29□□□□□ -1.56
SF3B1-202ENST00000409915 IL1R1P14778 569 aa5.29□□□□□ -1.56
SF3B1-202ENST00000409915 GARTP22102 1010 aa5.29□□□□□ -1.56
SF3B1-202ENST00000409915 FSHRP23945 695 aa5.29□□□□□ -1.56
SF3B1-202ENST00000409915 GSTT1P30711 240 aa5.29□□□□□ -1.56
SF3B1-202ENST00000409915 HIBADHP31937 336 aaKnown RBP5.29□□□□□ -1.56
SF3B1-202ENST00000409915 CRKP46108 304 aa5.29□□□□□ -1.56
SF3B1-202ENST00000409915 GIPRP48546 466 aa5.29□□□□□ -1.56
SF3B1-202ENST00000409915 HIRAP54198 1017 aaPredicted RBP5.29□□□□□ -1.56
SF3B1-202ENST00000409915 GEMIN4P57678 1058 aaKnown RBP5.29□□□□□ -1.56
SF3B1-202ENST00000409915 C1QTNF8P60827 252 aa5.29□□□□□ -1.56
SF3B1-202ENST00000409915 TIMM10P62072 90 aa5.29□□□□□ -1.56
SF3B1-202ENST00000409915 HTRA3P83110 453 aa5.29□□□□□ -1.56
SF3B1-202ENST00000409915 MAP3K10Q02779 954 aa5.29□□□□□ -1.56
SF3B1-202ENST00000409915 MTMR1Q13613 665 aa5.29□□□□□ -1.56
SF3B1-202ENST00000409915 GRIK5Q16478 980 aa5.29□□□□□ -1.56
SF3B1-202ENST00000409915 KIF4BQ2VIQ3 1234 aa5.29□□□□□ -1.56
SF3B1-202ENST00000409915 DNTTIP2Q5QJE6 756 aaKnown RBP5.29□□□□□ -1.56
SF3B1-202ENST00000409915 SNAP47Q5SQN1 464 aa5.29□□□□□ -1.56
SF3B1-202ENST00000409915 FBXW10Q5XX13 1052 aa5.29□□□□□ -1.56
SF3B1-202ENST00000409915 TTLL5Q6EMB2 1281 aa5.29□□□□□ -1.56
SF3B1-202ENST00000409915 DLK2Q6UY11 383 aa5.29□□□□□ -1.56
SF3B1-202ENST00000409915 GET4Q7L5D6 327 aaPredicted RBP5.29□□□□□ -1.56
SF3B1-202ENST00000409915 CREBRFQ8IUR6 639 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms