RNA–Protein interactions for RNA: ENST00000409828.7

PAX3-208, Transcript of paired box 3, humanhuman

TSL 1 (best) BASIC

Gene PAX3, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-208ENST00000409828 KRT40Q6A162 431 aa20.73■□□□□ 0.91
PAX3-208ENST00000409828 INPP4AQ96PE3 977 aaPredicted RBP20.73■□□□□ 0.91
PAX3-208ENST00000409828 CRISPLD2Q9H0B8 497 aa20.73■□□□□ 0.91
PAX3-208ENST00000409828 ZHX1Q9UKY1 873 aaPredicted RBP20.73■□□□□ 0.91
PAX3-208ENST00000409828 KCNJ14Q9UNX9 436 aa20.73■□□□□ 0.91
PAX3-208ENST00000409828 Q9Y3F1 56 aa20.73■□□□□ 0.91
PAX3-208ENST00000409828 NKRFO15226 690 aaKnown RBP eCLIP20.72■□□□□ 0.91
PAX3-208ENST00000409828 MAFGO15525 162 aa20.72■□□□□ 0.91
PAX3-208ENST00000409828 SGPL1O95470 568 aa20.72■□□□□ 0.91
PAX3-208ENST00000409828 GJB2P29033 226 aa20.72■□□□□ 0.91
PAX3-208ENST00000409828 KRT2P35908 639 aa20.72■□□□□ 0.91
PAX3-208ENST00000409828 GJA8P48165 433 aa20.72■□□□□ 0.91
PAX3-208ENST00000409828 MRPS9P82933 396 aaKnown RBP20.72■□□□□ 0.91
PAX3-208ENST00000409828 GNPTABQ3T906 1256 aa20.72■□□□□ 0.91
PAX3-208ENST00000409828 LHX8Q68G74 356 aa20.72■□□□□ 0.91
PAX3-208ENST00000409828 KRT25Q7Z3Z0 450 aa20.72■□□□□ 0.91
PAX3-208ENST00000409828 FBXO16Q8IX29 292 aaPredicted RBP20.72■□□□□ 0.91
PAX3-208ENST00000409828 IL31RAQ8NI17 732 aa20.72■□□□□ 0.91
PAX3-208ENST00000409828 TMEM260Q9NX78 707 aa20.72■□□□□ 0.91
PAX3-208ENST00000409828 DUSP11O75319 330 aaKnown RBP20.71■□□□□ 0.91
PAX3-208ENST00000409828 MYCLP12524 364 aaPredicted RBP20.71■□□□□ 0.91
PAX3-208ENST00000409828 CNGA1P29973 690 aa20.71■□□□□ 0.91
PAX3-208ENST00000409828 ICAM3P32942 547 aa20.71■□□□□ 0.91
PAX3-208ENST00000409828 USP11P51784 963 aa20.71■□□□□ 0.91
PAX3-208ENST00000409828 NKX3-2P78367 333 aa20.71■□□□□ 0.91
PAX3-208ENST00000409828 TTLL4Q14679 1199 aa20.71■□□□□ 0.91
PAX3-208ENST00000409828 SAFBQ15424 915 aaKnown RBP eCLIP20.71■□□□□ 0.91
PAX3-208ENST00000409828 DUSP28Q4G0W2 176 aa20.71■□□□□ 0.91
PAX3-208ENST00000409828 CDHR1Q96JP9 859 aa20.71■□□□□ 0.91
PAX3-208ENST00000409828 DEFB118Q96PH6 123 aa20.71■□□□□ 0.91
PAX3-208ENST00000409828 GJB4Q9NTQ9 266 aa20.71■□□□□ 0.91
PAX3-208ENST00000409828 ADAMTS3O15072 1205 aa20.7■□□□□ 0.9
PAX3-208ENST00000409828 DTNBO60941 627 aa20.7■□□□□ 0.9
PAX3-208ENST00000409828 RGS20O76081 388 aa20.7■□□□□ 0.9
PAX3-208ENST00000409828 RARBP10826 455 aa20.7■□□□□ 0.9
PAX3-208ENST00000409828 PDCP20941 246 aa20.7■□□□□ 0.9
PAX3-208ENST00000409828 ARHGAP4P98171 946 aa20.7■□□□□ 0.9
PAX3-208ENST00000409828 TNFAIP2Q03169 654 aa20.7■□□□□ 0.9
PAX3-208ENST00000409828 CCDC62Q6P9F0 684 aa20.7■□□□□ 0.9
PAX3-208ENST00000409828 EEPD1Q7L9B9 569 aa20.7■□□□□ 0.9
PAX3-208ENST00000409828 NIPA1Q7RTP0 329 aa20.7■□□□□ 0.9
PAX3-208ENST00000409828 NLRX1Q86UT6 975 aa20.7■□□□□ 0.9
PAX3-208ENST00000409828 U2AF1L4Q8WU68 220 aaKnown RBP20.7■□□□□ 0.9
PAX3-208ENST00000409828 GPRASP2Q96D09 838 aa20.7■□□□□ 0.9
PAX3-208ENST00000409828 WDR11Q9BZH6 1224 aa20.7■□□□□ 0.9
PAX3-208ENST00000409828 OGDHLQ9ULD0 1010 aa20.7■□□□□ 0.9
PAX3-208ENST00000409828 UBIAD1Q9Y5Z9 338 aa20.7■□□□□ 0.9
PAX3-208ENST00000409828 DDX49Q9Y6V7 483 aaKnown RBP20.7■□□□□ 0.9
PAX3-208ENST00000409828 BRCA2P51587 3418 aa20.69■□□□□ 0.9
PAX3-208ENST00000409828 CIITAP33076 1130 aa20.69■□□□□ 0.9
PAX3-208ENST00000409828 ADCYAP1R1P41586 468 aa20.69■□□□□ 0.9
PAX3-208ENST00000409828 NONOQ15233 471 aaKnown RBP eCLIP20.69■□□□□ 0.9
PAX3-208ENST00000409828 MOXD1Q6UVY6 613 aa20.69■□□□□ 0.9
PAX3-208ENST00000409828 DIS3L2Q8IYB7 885 aaKnown RBP20.69■□□□□ 0.9
PAX3-208ENST00000409828 ANKLE1Q8NAG6 615 aa20.69■□□□□ 0.9
PAX3-208ENST00000409828 RASGRP4Q8TDF6 673 aa20.69■□□□□ 0.9
PAX3-208ENST00000409828 TNFRSF25Q93038 417 aa20.69■□□□□ 0.9
PAX3-208ENST00000409828 FOXP1Q9H334 677 aaPredicted RBP20.69■□□□□ 0.9
PAX3-208ENST00000409828 PDGFCQ9NRA1 345 aa20.69■□□□□ 0.9
PAX3-208ENST00000409828 GNEQ9Y223 722 aaKnown RBP20.69■□□□□ 0.9
PAX3-208ENST00000409828 CCDC194A0A1B0GVG4 234 aa20.68■□□□□ 0.9
PAX3-208ENST00000409828 FIBPO43427 364 aa20.68■□□□□ 0.9
PAX3-208ENST00000409828 PDIA4P13667 645 aaKnown RBP20.68■□□□□ 0.9
PAX3-208ENST00000409828 CEP55Q53EZ4 464 aa20.68■□□□□ 0.9
PAX3-208ENST00000409828 SENP7Q9BQF6 1050 aa20.68■□□□□ 0.9
PAX3-208ENST00000409828 MXRA8Q9BRK3 442 aa20.68■□□□□ 0.9
PAX3-208ENST00000409828 UPF3AQ9H1J1 476 aaKnown RBP20.68■□□□□ 0.9
PAX3-208ENST00000409828 JADE2Q9NQC1 790 aa20.68■□□□□ 0.9
PAX3-208ENST00000409828 DDX41Q9UJV9 622 aaKnown RBP20.68■□□□□ 0.9
PAX3-208ENST00000409828 SPATA31C2B4DYI2 1134 aa20.67■□□□□ 0.9
PAX3-208ENST00000409828 MEIS1O00470 390 aa20.67■□□□□ 0.9
PAX3-208ENST00000409828 SMPD1P17405 629 aa20.67■□□□□ 0.9
PAX3-208ENST00000409828 GJA9P57773 515 aa20.67■□□□□ 0.9
PAX3-208ENST00000409828 SEPT14Q6ZU15 432 aa20.67■□□□□ 0.9
PAX3-208ENST00000409828 ARRDC4Q8NCT1 418 aa20.67■□□□□ 0.9
PAX3-208ENST00000409828 EMID1Q96A84 441 aaPredicted RBP20.67■□□□□ 0.9
PAX3-208ENST00000409828 PGBD1Q96JS3 809 aa20.67■□□□□ 0.9
PAX3-208ENST00000409828 MRVI1Q9Y6F6 885 aa20.67■□□□□ 0.9
PAX3-208ENST00000409828 CYP3A7-CYP3A51PA0A087WV96 503 aa20.66■□□□□ 0.9
PAX3-208ENST00000409828 BTBD18B2RXH4 712 aa20.66■□□□□ 0.9
PAX3-208ENST00000409828 ADCY6O43306 1168 aa20.66■□□□□ 0.9
PAX3-208ENST00000409828 MYCP01106 439 aaPredicted RBP20.66■□□□□ 0.9
PAX3-208ENST00000409828 TXNP10599 105 aaKnown RBP20.66■□□□□ 0.9
PAX3-208ENST00000409828 ITGB5P18084 799 aa20.66■□□□□ 0.9
PAX3-208ENST00000409828 CYP3A7P24462 503 aa20.66■□□□□ 0.9
PAX3-208ENST00000409828 BECN1Q14457 450 aa20.66■□□□□ 0.9
PAX3-208ENST00000409828 LARP1BQ659C4 914 aaKnown RBP20.66■□□□□ 0.9
PAX3-208ENST00000409828 GIMAP8Q8ND71 665 aaPredicted RBP20.66■□□□□ 0.9
PAX3-208ENST00000409828 OXER1Q8TDS5 423 aa20.66■□□□□ 0.9
PAX3-208ENST00000409828 TBCKQ8TEA7 893 aa20.66■□□□□ 0.9
PAX3-208ENST00000409828 NAP1L4Q99733 375 aaKnown RBP20.66■□□□□ 0.9
PAX3-208ENST00000409828 SPC25Q9HBM1 224 aa20.66■□□□□ 0.9
PAX3-208ENST00000409828 XPNPEP3Q9NQH7 507 aa20.66■□□□□ 0.9
PAX3-208ENST00000409828 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.65■□□□□ 0.9
PAX3-208ENST00000409828 ADAMTS4O75173 837 aa20.65■□□□□ 0.9
PAX3-208ENST00000409828 U2AF2P26368 475 aaKnown RBP eCLIP20.65■□□□□ 0.9
PAX3-208ENST00000409828 CST5P28325 142 aaPredicted RBP20.65■□□□□ 0.9
PAX3-208ENST00000409828 SETQ01105 290 aaPredicted RBP20.65■□□□□ 0.9
PAX3-208ENST00000409828 NR5A1Q13285 461 aa20.65■□□□□ 0.9
PAX3-208ENST00000409828 MBOAT7Q96N66 472 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms