RNA–Protein interactions for RNA: ENST00000402813.7

CNGA1-202, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNGA1, Length 2,867 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-202ENST00000402813 TRAF1Q13077 416 aa6.35□□□□□ -1.39
CNGA1-202ENST00000402813 GTF2H3Q13889 308 aa6.35□□□□□ -1.39
CNGA1-202ENST00000402813 MEA1Q16626 185 aa6.35□□□□□ -1.39
CNGA1-202ENST00000402813 HEATR6Q6AI08 1181 aaKnown RBP6.35□□□□□ -1.39
CNGA1-202ENST00000402813 CCDC186Q7Z3E2 898 aa6.35□□□□□ -1.39
CNGA1-202ENST00000402813 PPP1R42Q7Z4L9 355 aa6.35□□□□□ -1.39
CNGA1-202ENST00000402813 AFAP1Q8N556 730 aa6.35□□□□□ -1.39
CNGA1-202ENST00000402813 FBXO30Q8TB52 745 aa6.35□□□□□ -1.39
CNGA1-202ENST00000402813 CPLX3Q8WVH0 158 aa6.35□□□□□ -1.39
CNGA1-202ENST00000402813 NT5C1BQ96P26 610 aa6.35□□□□□ -1.39
CNGA1-202ENST00000402813 GPATCH1Q9BRR8 931 aaKnown RBP6.35□□□□□ -1.39
CNGA1-202ENST00000402813 WDR12Q9GZL7 423 aaKnown RBP6.35□□□□□ -1.39
CNGA1-202ENST00000402813 ZWILCHQ9H900 591 aa6.35□□□□□ -1.39
CNGA1-202ENST00000402813 ZMYM5Q9UJ78 669 aa6.35□□□□□ -1.39
CNGA1-202ENST00000402813 GPR34Q9UPC5 381 aa6.35□□□□□ -1.39
CNGA1-202ENST00000402813 MTUS2Q5JR59 1369 aa6.35□□□□□ -1.39
CNGA1-202ENST00000402813 NPC1L1Q9UHC9 1359 aa6.35□□□□□ -1.39
CNGA1-202ENST00000402813 MAGI2Q86UL8 1455 aa6.34□□□□□ -1.39
CNGA1-202ENST00000402813 F8W031 263 aaPredicted RBP6.34□□□□□ -1.39
CNGA1-202ENST00000402813 ZBTB43O43298 467 aa6.34□□□□□ -1.39
CNGA1-202ENST00000402813 FBXO21O94952 628 aa6.34□□□□□ -1.39
CNGA1-202ENST00000402813 CLCN2P51788 898 aa6.34□□□□□ -1.39
CNGA1-202ENST00000402813 KIF11P52732 1056 aa6.34□□□□□ -1.39
CNGA1-202ENST00000402813 ATXN1P54253 815 aaKnown RBP6.34□□□□□ -1.39
CNGA1-202ENST00000402813 SLC12A2P55011 1212 aa6.34□□□□□ -1.39
CNGA1-202ENST00000402813 BECN1Q14457 450 aa6.34□□□□□ -1.39
CNGA1-202ENST00000402813 CCDC152Q4G0S7 254 aa6.34□□□□□ -1.39
CNGA1-202ENST00000402813 PCNX4Q63HM2 1172 aa6.34□□□□□ -1.39
CNGA1-202ENST00000402813 FAM169BQ8N8A8 192 aa6.34□□□□□ -1.39
CNGA1-202ENST00000402813 ZNF280CQ8ND82 737 aa6.34□□□□□ -1.39
CNGA1-202ENST00000402813 SLC30A5Q8TAD4 765 aa6.34□□□□□ -1.39
CNGA1-202ENST00000402813 KCNN1Q92952 543 aa6.34□□□□□ -1.39
CNGA1-202ENST00000402813 UBXN10Q96LJ8 280 aa6.34□□□□□ -1.39
CNGA1-202ENST00000402813 SH3GL1Q99961 368 aa6.34□□□□□ -1.39
CNGA1-202ENST00000402813 NTPCRQ9BSD7 190 aaKnown RBP6.34□□□□□ -1.39
CNGA1-202ENST00000402813 TTLL2Q9BWV7 592 aa6.34□□□□□ -1.39
CNGA1-202ENST00000402813 IL20Q9NYY1 176 aa6.34□□□□□ -1.39
CNGA1-202ENST00000402813 EIF3AQ14152 1382 aaKnown RBP6.34□□□□□ -1.39
CNGA1-202ENST00000402813 NINLQ9Y2I6 1382 aa6.34□□□□□ -1.39
CNGA1-202ENST00000402813 DAPK1P53355 1430 aa6.34□□□□□ -1.39
CNGA1-202ENST00000402813 PRDM15P57071 1507 aaPredicted RBP6.34□□□□□ -1.39
CNGA1-202ENST00000402813 A0A0G2JS52 829 aa6.34□□□□□ -1.39
CNGA1-202ENST00000402813 KRBA1A5PL33 1030 aa6.34□□□□□ -1.39
CNGA1-202ENST00000402813 A8MVJ9 347 aa6.34□□□□□ -1.39
CNGA1-202ENST00000402813 SLC7A4O43246 635 aa6.34□□□□□ -1.39
CNGA1-202ENST00000402813 LGR5O75473 907 aa6.34□□□□□ -1.39
CNGA1-202ENST00000402813 SMC2O95347 1197 aa6.34□□□□□ -1.39
CNGA1-202ENST00000402813 RRP1P56182 461 aaKnown RBP6.34□□□□□ -1.39
CNGA1-202ENST00000402813 PIP4K2BP78356 416 aa6.34□□□□□ -1.39
CNGA1-202ENST00000402813 PPP2R3AQ06190 1150 aa6.34□□□□□ -1.39
CNGA1-202ENST00000402813 CBX2Q14781 532 aaPredicted RBP6.34□□□□□ -1.39
CNGA1-202ENST00000402813 LIN54Q6MZP7 749 aa6.34□□□□□ -1.39
CNGA1-202ENST00000402813 INTS8Q75QN2 995 aaKnown RBP6.34□□□□□ -1.39
CNGA1-202ENST00000402813 CCDC80Q76M96 950 aa6.34□□□□□ -1.39
CNGA1-202ENST00000402813 KDELC2Q7Z4H8 507 aa6.34□□□□□ -1.39
CNGA1-202ENST00000402813 GALNTL5Q7Z4T8 443 aa6.34□□□□□ -1.39
CNGA1-202ENST00000402813 IFNL1Q8IU54 200 aa6.34□□□□□ -1.39
CNGA1-202ENST00000402813 LRRC71Q8N4P6 559 aa6.34□□□□□ -1.39
CNGA1-202ENST00000402813 TTC13Q8NBP0 860 aa6.34□□□□□ -1.39
CNGA1-202ENST00000402813 ZNF669Q96BR6 464 aaPredicted RBP6.34□□□□□ -1.39
CNGA1-202ENST00000402813 JAKMIP1Q96N16 626 aaKnown RBP6.34□□□□□ -1.39
CNGA1-202ENST00000402813 CSRNP1Q96S65 589 aa6.34□□□□□ -1.39
CNGA1-202ENST00000402813 YIPF2Q9BWQ6 316 aa6.34□□□□□ -1.39
CNGA1-202ENST00000402813 MYLK2Q9H1R3 596 aa6.34□□□□□ -1.39
CNGA1-202ENST00000402813 SENP2Q9HC62 589 aa6.34□□□□□ -1.39
CNGA1-202ENST00000402813 ETAA1Q9NY74 926 aa6.34□□□□□ -1.39
CNGA1-202ENST00000402813 CHMP5Q9NZZ3 219 aa6.34□□□□□ -1.39
CNGA1-202ENST00000402813 YEATS2Q9ULM3 1422 aa6.34□□□□□ -1.4
CNGA1-202ENST00000402813 LOC102724428A0A0B4J2F2 783 aa6.33□□□□□ -1.4
CNGA1-202ENST00000402813 CCDC69A6NI79 296 aa6.33□□□□□ -1.4
CNGA1-202ENST00000402813 RRN3P2A6NIE6 340 aa6.33□□□□□ -1.4
CNGA1-202ENST00000402813 POLR3GO15318 223 aaPredicted RBP6.33□□□□□ -1.4
CNGA1-202ENST00000402813 ZNF254O75437 659 aa6.33□□□□□ -1.4
CNGA1-202ENST00000402813 STAM2O75886 525 aa6.33□□□□□ -1.4
CNGA1-202ENST00000402813 FDX1P10109 184 aa6.33□□□□□ -1.4
CNGA1-202ENST00000402813 PRKAR2AP13861 404 aaKnown RBP6.33□□□□□ -1.4
CNGA1-202ENST00000402813 PBLDP30039 288 aaPredicted RBP6.33□□□□□ -1.4
CNGA1-202ENST00000402813 CENPAP49450 140 aa6.33□□□□□ -1.4
CNGA1-202ENST00000402813 SIK1P57059 783 aa6.33□□□□□ -1.4
CNGA1-202ENST00000402813 RELQ04864 619 aaPredicted RBP6.33□□□□□ -1.4
CNGA1-202ENST00000402813 SSPNQ14714 243 aa6.33□□□□□ -1.4
CNGA1-202ENST00000402813 ARHGAP29Q52LW3 1261 aa6.33□□□□□ -1.4
CNGA1-202ENST00000402813 BOLA3Q53S33 107 aa6.33□□□□□ -1.4
CNGA1-202ENST00000402813 CHST15Q7LFX5 561 aaPredicted RBP6.33□□□□□ -1.4
CNGA1-202ENST00000402813 KRT222Q8N1A0 295 aa6.33□□□□□ -1.4
CNGA1-202ENST00000402813 LINC00469Q8N7U9 141 aa6.33□□□□□ -1.4
CNGA1-202ENST00000402813 PPP1R14CQ8TAE6 165 aa6.33□□□□□ -1.4
CNGA1-202ENST00000402813 TEX13BQ9BXU2 312 aa6.33□□□□□ -1.4
CNGA1-202ENST00000402813 C2orf40Q9H1Z8 148 aa6.33□□□□□ -1.4
CNGA1-202ENST00000402813 TAOK3Q9H2K8 898 aa6.33□□□□□ -1.4
CNGA1-202ENST00000402813 VCPKMTQ9H867 229 aa6.33□□□□□ -1.4
CNGA1-202ENST00000402813 SPATA7Q9P0W8 599 aa6.33□□□□□ -1.4
CNGA1-202ENST00000402813 TSR3Q9UJK0 312 aaKnown RBP6.33□□□□□ -1.4
CNGA1-202ENST00000402813 KIAA1107Q9UPP5 1409 aa6.33□□□□□ -1.4
CNGA1-202ENST00000402813 URB2Q14146 1524 aaKnown RBP6.33□□□□□ -1.4
CNGA1-202ENST00000402813 SYNJ2O15056 1496 aa6.33□□□□□ -1.4
CNGA1-202ENST00000402813 HNRNPCL2B2RXH8 293 aa6.33□□□□□ -1.4
CNGA1-202ENST00000402813 PPP1R12BO60237 982 aaPredicted RBP6.33□□□□□ -1.4
CNGA1-202ENST00000402813 NMT2O60551 498 aa6.33□□□□□ -1.4
CNGA1-202ENST00000402813 HNRNPCL1O60812 293 aaKnown RBP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms