RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 MEGF6O75095 1541 aa10.95□□□□□ -0.66
PTCHD4-202ENST00000398738 MST1RQ04912 1400 aa10.95□□□□□ -0.66
PTCHD4-202ENST00000398738 WTIPA6NIX2 430 aaPredicted RBP10.95□□□□□ -0.66
PTCHD4-202ENST00000398738 MEFVO15553 781 aaPredicted RBP10.95□□□□□ -0.66
PTCHD4-202ENST00000398738 CCDC172P0C7W6 258 aa10.95□□□□□ -0.66
PTCHD4-202ENST00000398738 SCP2P22307 547 aa10.95□□□□□ -0.66
PTCHD4-202ENST00000398738 PDE6BP35913 854 aa10.95□□□□□ -0.66
PTCHD4-202ENST00000398738 DYNLL1P63167 89 aaKnown RBP10.95□□□□□ -0.66
PTCHD4-202ENST00000398738 ASIC1P78348 528 aa10.95□□□□□ -0.66
PTCHD4-202ENST00000398738 ADSSL1Q8N142 457 aa10.95□□□□□ -0.66
PTCHD4-202ENST00000398738 ZBTB38Q8NAP3 1195 aaPredicted RBP10.95□□□□□ -0.66
PTCHD4-202ENST00000398738 UIMC1Q96RL1 719 aa10.95□□□□□ -0.66
PTCHD4-202ENST00000398738 ISCA1Q9BUE6 129 aa10.95□□□□□ -0.66
PTCHD4-202ENST00000398738 KANSL2Q9H9L4 492 aa10.95□□□□□ -0.66
PTCHD4-202ENST00000398738 SCUBE2Q9NQ36 999 aa10.95□□□□□ -0.66
PTCHD4-202ENST00000398738 SALL4Q9UJQ4 1053 aa10.95□□□□□ -0.66
PTCHD4-202ENST00000398738 NFAT5O94916 1531 aa10.94□□□□□ -0.66
PTCHD4-202ENST00000398738 NWD2Q9ULI1 1742 aa10.94□□□□□ -0.66
PTCHD4-202ENST00000398738 CDR1P51861 262 aa10.94□□□□□ -0.66
PTCHD4-202ENST00000398738 ATP2C1P98194 919 aaPredicted RBP10.94□□□□□ -0.66
PTCHD4-202ENST00000398738 GFPT1Q06210 699 aaPredicted RBP10.94□□□□□ -0.66
PTCHD4-202ENST00000398738 NAA35Q5VZE5 725 aa10.94□□□□□ -0.66
PTCHD4-202ENST00000398738 HAUS3Q68CZ6 603 aa10.94□□□□□ -0.66
PTCHD4-202ENST00000398738 ANKRD40Q6AI12 368 aa10.94□□□□□ -0.66
PTCHD4-202ENST00000398738 DNAAF5Q86Y56 855 aa10.94□□□□□ -0.66
PTCHD4-202ENST00000398738 TEX2Q8IWB9 1127 aa10.94□□□□□ -0.66
PTCHD4-202ENST00000398738 SLC39A2Q9NP94 309 aa10.94□□□□□ -0.66
PTCHD4-202ENST00000398738 JAG2Q9Y219 1238 aa10.94□□□□□ -0.66
PTCHD4-202ENST00000398738 GOLGA6L7A0A1B0GV03 622 aa10.94□□□□□ -0.66
PTCHD4-202ENST00000398738 RASSF10A6NK89 507 aa10.94□□□□□ -0.66
PTCHD4-202ENST00000398738 RPSAP08865 295 aaKnown RBP10.94□□□□□ -0.66
PTCHD4-202ENST00000398738 NR1D1P20393 614 aa10.94□□□□□ -0.66
PTCHD4-202ENST00000398738 KIF11P52732 1056 aa10.94□□□□□ -0.66
PTCHD4-202ENST00000398738 EPHB4P54760 987 aa10.94□□□□□ -0.66
PTCHD4-202ENST00000398738 SRBD1Q8N5C6 995 aaKnown RBP10.94□□□□□ -0.66
PTCHD4-202ENST00000398738 TRIM58Q8NG06 486 aa10.94□□□□□ -0.66
PTCHD4-202ENST00000398738 ZSCAN10Q96SZ4 725 aaPredicted RBP10.94□□□□□ -0.66
PTCHD4-202ENST00000398738 UQCRFS1P1P0C7P4 283 aa10.94□□□□□ -0.66
PTCHD4-202ENST00000398738 TMOD1P28289 359 aa10.94□□□□□ -0.66
PTCHD4-202ENST00000398738 CTSWP56202 376 aa10.94□□□□□ -0.66
PTCHD4-202ENST00000398738 ZBED6P86452 979 aa10.94□□□□□ -0.66
PTCHD4-202ENST00000398738 STK4Q13043 487 aa10.94□□□□□ -0.66
PTCHD4-202ENST00000398738 ADGRA1Q86SQ6 560 aa10.94□□□□□ -0.66
PTCHD4-202ENST00000398738 IQCA1Q86XH1 822 aa10.94□□□□□ -0.66
PTCHD4-202ENST00000398738 ZNF507Q8TCN5 953 aa10.94□□□□□ -0.66
PTCHD4-202ENST00000398738 ZNF473Q8WTR7 871 aaKnown RBP10.94□□□□□ -0.66
PTCHD4-202ENST00000398738 STAG1Q8WVM7 1258 aa10.94□□□□□ -0.66
PTCHD4-202ENST00000398738 CCT8L2Q96SF2 557 aa10.94□□□□□ -0.66
PTCHD4-202ENST00000398738 SH3GL2Q99962 352 aa10.94□□□□□ -0.66
PTCHD4-202ENST00000398738 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.94□□□□□ -0.663e-6■□□□□ 9.9
PTCHD4-202ENST00000398738 GOLPH3Q9H4A6 298 aa10.94□□□□□ -0.66
PTCHD4-202ENST00000398738 RNF41Q9H4P4 317 aaPredicted RBP10.94□□□□□ -0.66
PTCHD4-202ENST00000398738 SPATA31A3Q5VYP0 1347 aa10.93□□□□□ -0.66
PTCHD4-202ENST00000398738 ZNF233A6NK53 670 aa10.93□□□□□ -0.66
PTCHD4-202ENST00000398738 INF2Q27J81 1249 aa10.93□□□□□ -0.66
PTCHD4-202ENST00000398738 DTHD1Q6ZMT9 781 aa10.93□□□□□ -0.66
PTCHD4-202ENST00000398738 CACNA2D4Q7Z3S7 1137 aa10.93□□□□□ -0.66
PTCHD4-202ENST00000398738 N4BP2L2Q92802 583 aaPredicted RBP10.93□□□□□ -0.66
PTCHD4-202ENST00000398738 ALS2CR12Q96Q35 445 aa10.93□□□□□ -0.66
PTCHD4-202ENST00000398738 TMEM60Q9H2L4 133 aa10.93□□□□□ -0.66
PTCHD4-202ENST00000398738 ARHGAP20Q9P2F6 1191 aa10.93□□□□□ -0.66
PTCHD4-202ENST00000398738 ASAP1Q9ULH1 1129 aa10.93□□□□□ -0.66
PTCHD4-202ENST00000398738 PDHBP11177 359 aa10.93□□□□□ -0.66
PTCHD4-202ENST00000398738 EHHADHQ08426 723 aa10.93□□□□□ -0.66
PTCHD4-202ENST00000398738 MTMR2Q13614 643 aa10.93□□□□□ -0.66
PTCHD4-202ENST00000398738 DYMQ7RTS9 669 aa10.93□□□□□ -0.66
PTCHD4-202ENST00000398738 DDX42Q86XP3 938 aaKnown RBP eCLIP10.93□□□□□ -0.66
PTCHD4-202ENST00000398738 ZCRB1Q8TBF4 217 aaKnown RBP10.93□□□□□ -0.66
PTCHD4-202ENST00000398738 HYOU1Q9Y4L1 999 aa10.93□□□□□ -0.66
PTCHD4-202ENST00000398738 KAT6BQ8WYB5 2073 aa10.93□□□□□ -0.66
PTCHD4-202ENST00000398738 SRGNP10124 158 aa10.92□□□□□ -0.66
PTCHD4-202ENST00000398738 SLC5A1P13866 664 aa10.92□□□□□ -0.66
PTCHD4-202ENST00000398738 PUM3Q15397 648 aaKnown RBP10.92□□□□□ -0.66
PTCHD4-202ENST00000398738 CCDC40Q4G0X9 1142 aa10.92□□□□□ -0.66
PTCHD4-202ENST00000398738 TMEM259Q4ZIN3 620 aa10.92□□□□□ -0.66
PTCHD4-202ENST00000398738 LPIN2Q92539 896 aa10.92□□□□□ -0.66
PTCHD4-202ENST00000398738 CPVLQ9H3G5 476 aa10.92□□□□□ -0.66
PTCHD4-202ENST00000398738 DISC1Q9NRI5 854 aa10.92□□□□□ -0.66
PTCHD4-202ENST00000398738 SERPINA10Q9UK55 444 aa10.92□□□□□ -0.66
PTCHD4-202ENST00000398738 SLC27A5Q9Y2P5 690 aa10.92□□□□□ -0.66
PTCHD4-202ENST00000398738 MAP3K15Q6ZN16 1313 aa10.92□□□□□ -0.66
PTCHD4-202ENST00000398738 NHSL1Q5SYE7 1610 aa10.92□□□□□ -0.66
PTCHD4-202ENST00000398738 CCDC194A0A1B0GVG4 234 aa10.92□□□□□ -0.66
PTCHD4-202ENST00000398738 BMP15O95972 392 aa10.92□□□□□ -0.66
PTCHD4-202ENST00000398738 CSF1RP07333 972 aa10.92□□□□□ -0.66
PTCHD4-202ENST00000398738 EEF1GP26641 437 aaKnown RBP10.92□□□□□ -0.66
PTCHD4-202ENST00000398738 CCDC121Q6ZUS5 278 aa10.92□□□□□ -0.66
PTCHD4-202ENST00000398738 NLRP14Q86W24 1093 aa10.92□□□□□ -0.66
PTCHD4-202ENST00000398738 PRPF38AQ8NAV1 312 aaKnown RBP10.92□□□□□ -0.66
PTCHD4-202ENST00000398738 MTMR8Q96EF0 704 aa10.92□□□□□ -0.66
PTCHD4-202ENST00000398738 DUSP9Q99956 384 aaKnown RBP10.92□□□□□ -0.66
PTCHD4-202ENST00000398738 KLC4Q9NSK0 619 aa10.92□□□□□ -0.66
PTCHD4-202ENST00000398738 ANO9A1A5B4 782 aa10.92□□□□□ -0.66
PTCHD4-202ENST00000398738 LRRC53A6NM62 1247 aa10.92□□□□□ -0.66
PTCHD4-202ENST00000398738 USP17L12C9JPN9 530 aa10.92□□□□□ -0.66
PTCHD4-202ENST00000398738 USP17L21D6R901 530 aa10.92□□□□□ -0.66
PTCHD4-202ENST00000398738 PRPF3O43395 683 aaKnown RBP10.92□□□□□ -0.66
PTCHD4-202ENST00000398738 LGR5O75473 907 aa10.92□□□□□ -0.66
PTCHD4-202ENST00000398738 NF2P35240 595 aa10.92□□□□□ -0.66
PTCHD4-202ENST00000398738 SLC1A4P43007 532 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms