RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 PPRC1Q5VV67 1664 aaKnown RBP21.46■■□□□ 1.03
SHANK1-203ENST00000391813 DRP2Q13474 957 aa21.46■■□□□ 1.03
SHANK1-203ENST00000391813 FMR1NBQ8N0W7 255 aaPredicted RBP21.46■■□□□ 1.03
SHANK1-203ENST00000391813 COG1Q8WTW3 980 aa21.46■■□□□ 1.03
SHANK1-203ENST00000391813 AK8Q96MA6 479 aa21.46■■□□□ 1.03
SHANK1-203ENST00000391813 PCDHB13Q9Y5F0 798 aa21.46■■□□□ 1.03
SHANK1-203ENST00000391813 TNKSO95271 1327 aa21.46■■□□□ 1.03
SHANK1-203ENST00000391813 DDAH1O94760 285 aa21.45■■□□□ 1.03
SHANK1-203ENST00000391813 LMNB1P20700 586 aa21.45■■□□□ 1.03
SHANK1-203ENST00000391813 ZBTB17Q13105 803 aa21.45■■□□□ 1.03
SHANK1-203ENST00000391813 PTPN21Q16825 1174 aa21.45■■□□□ 1.03
SHANK1-203ENST00000391813 SCYL3Q8IZE3 742 aa21.45■■□□□ 1.03
SHANK1-203ENST00000391813 ARMC2Q8NEN0 867 aa21.45■■□□□ 1.03
SHANK1-203ENST00000391813 PPP4R1Q8TF05 950 aa21.45■■□□□ 1.03
SHANK1-203ENST00000391813 C6orf118Q5T5N4 469 aa21.45■■□□□ 1.02
SHANK1-203ENST00000391813 SULF1Q8IWU6 871 aa21.45■■□□□ 1.02
SHANK1-203ENST00000391813 N4BP1O75113 896 aaKnown RBP21.45■■□□□ 1.02
SHANK1-203ENST00000391813 MMP10P09238 476 aa21.45■■□□□ 1.02
SHANK1-203ENST00000391813 POLE2P56282 527 aa21.45■■□□□ 1.02
SHANK1-203ENST00000391813 PDE1CQ14123 709 aaPredicted RBP21.45■■□□□ 1.02
SHANK1-203ENST00000391813 MYCT1Q8N699 235 aa21.45■■□□□ 1.02
SHANK1-203ENST00000391813 CD2APQ9Y5K6 639 aa21.45■■□□□ 1.02
SHANK1-203ENST00000391813 PDE6AP16499 860 aa21.45■■□□□ 1.02
SHANK1-203ENST00000391813 TBC1D1Q86TI0 1168 aaPredicted RBP21.45■■□□□ 1.02
SHANK1-203ENST00000391813 IFNAR1P17181 557 aa21.44■■□□□ 1.02
SHANK1-203ENST00000391813 STRN3Q13033 797 aa21.44■■□□□ 1.02
SHANK1-203ENST00000391813 EAPPQ56P03 285 aaPredicted RBP21.44■■□□□ 1.02
SHANK1-203ENST00000391813 RTKN2Q8IZC4 609 aa21.44■■□□□ 1.02
SHANK1-203ENST00000391813 FMO2Q99518 471 aa21.44■■□□□ 1.02
SHANK1-203ENST00000391813 PNMA2Q9UL42 364 aa21.44■■□□□ 1.02
SHANK1-203ENST00000391813 ADGRG1Q9Y653 693 aa21.44■■□□□ 1.02
SHANK1-203ENST00000391813 TRPM1Q7Z4N2 1603 aa21.44■■□□□ 1.02
SHANK1-203ENST00000391813 ZBED4O75132 1171 aa21.44■■□□□ 1.02
SHANK1-203ENST00000391813 MAPKAPK5Q8IW41 473 aa21.44■■□□□ 1.02
SHANK1-203ENST00000391813 SLC39A2Q9NP94 309 aa21.44■■□□□ 1.02
SHANK1-203ENST00000391813 ABCC12Q96J65 1359 aa21.44■■□□□ 1.02
SHANK1-203ENST00000391813 TARSL2A2RTX5 802 aaKnown RBP21.44■■□□□ 1.02
SHANK1-203ENST00000391813 LMNAP02545 664 aaKnown RBP21.44■■□□□ 1.02
SHANK1-203ENST00000391813 GYG1P46976 350 aa21.44■■□□□ 1.02
SHANK1-203ENST00000391813 PDE6CP51160 858 aa21.44■■□□□ 1.02
SHANK1-203ENST00000391813 USP14P54578 494 aa21.44■■□□□ 1.02
SHANK1-203ENST00000391813 ADCY2Q08462 1091 aa21.44■■□□□ 1.02
SHANK1-203ENST00000391813 DBN1Q16643 649 aa21.44■■□□□ 1.02
SHANK1-203ENST00000391813 EXOC3L4Q17RC7 722 aa21.44■■□□□ 1.02
SHANK1-203ENST00000391813 NEK8Q86SG6 692 aa21.44■■□□□ 1.02
SHANK1-203ENST00000391813 DCPSQ96C86 337 aaKnown RBP21.44■■□□□ 1.02
SHANK1-203ENST00000391813 ADAMTS13Q76LX8 1427 aa21.44■■□□□ 1.02
SHANK1-203ENST00000391813 SMCO2A6NFE2 343 aa21.44■■□□□ 1.02
SHANK1-203ENST00000391813 SART1O43290 800 aaKnown RBP21.44■■□□□ 1.02
SHANK1-203ENST00000391813 CCNE1P24864 410 aa21.44■■□□□ 1.02
SHANK1-203ENST00000391813 SLC1A4P43007 532 aa21.44■■□□□ 1.02
SHANK1-203ENST00000391813 LMNB2Q03252 620 aa21.44■■□□□ 1.02
SHANK1-203ENST00000391813 DALRD3Q5D0E6 543 aaKnown RBP21.44■■□□□ 1.02
SHANK1-203ENST00000391813 PDCD7Q8N8D1 485 aaKnown RBP21.44■■□□□ 1.02
SHANK1-203ENST00000391813 PCDHA13Q9Y5I0 950 aa21.44■■□□□ 1.02
SHANK1-203ENST00000391813 MMP1P03956 469 aa21.43■■□□□ 1.02
SHANK1-203ENST00000391813 PLTPP55058 493 aa21.43■■□□□ 1.02
SHANK1-203ENST00000391813 ADAM9Q13443 819 aa21.43■■□□□ 1.02
SHANK1-203ENST00000391813 GABPB2Q8TAK5 448 aaPredicted RBP21.43■■□□□ 1.02
SHANK1-203ENST00000391813 NFU1Q9UMS0 254 aa21.43■■□□□ 1.02
SHANK1-203ENST00000391813 USTQ9Y2C2 406 aa21.43■■□□□ 1.02
SHANK1-203ENST00000391813 MED14O60244 1454 aa21.43■■□□□ 1.02
SHANK1-203ENST00000391813 RASGRF2O14827 1237 aa21.43■■□□□ 1.02
SHANK1-203ENST00000391813 CXCR5P32302 372 aa21.43■■□□□ 1.02
SHANK1-203ENST00000391813 KRT31Q15323 416 aa21.43■■□□□ 1.02
SHANK1-203ENST00000391813 CTAGE3PQ8IX95 158 aa21.43■■□□□ 1.02
SHANK1-203ENST00000391813 TGFBRAP1Q8WUH2 860 aa21.43■■□□□ 1.02
SHANK1-203ENST00000391813 IWS1Q96ST2 819 aa21.43■■□□□ 1.02
SHANK1-203ENST00000391813 SETD1BQ9UPS6 1966 aaKnown RBP21.43■■□□□ 1.02
SHANK1-203ENST00000391813 GMNCA6NCL1 334 aa21.43■■□□□ 1.02
SHANK1-203ENST00000391813 STK10O94804 968 aaKnown RBP21.43■■□□□ 1.02
SHANK1-203ENST00000391813 MOCS3O95396 460 aa21.43■■□□□ 1.02
SHANK1-203ENST00000391813 POLA2Q14181 598 aa21.43■■□□□ 1.02
SHANK1-203ENST00000391813 TTLL6Q8N841 843 aa21.43■■□□□ 1.02
SHANK1-203ENST00000391813 TSPYL2Q9H2G4 693 aaPredicted RBP21.43■■□□□ 1.02
SHANK1-203ENST00000391813 ATP5HO75947 161 aa21.43■■□□□ 1.02
SHANK1-203ENST00000391813 EIF4A3P38919 411 aaKnown RBP21.43■■□□□ 1.02
SHANK1-203ENST00000391813 FKBP3Q00688 224 aaKnown RBP21.43■■□□□ 1.02
SHANK1-203ENST00000391813 SMYD4Q8IYR2 804 aaPredicted RBP21.43■■□□□ 1.02
SHANK1-203ENST00000391813 RUBCNQ92622 972 aa21.43■■□□□ 1.02
SHANK1-203ENST00000391813 KIFC2Q96AC6 838 aa21.43■■□□□ 1.02
SHANK1-203ENST00000391813 GPCPD1Q9NPB8 672 aa21.43■■□□□ 1.02
SHANK1-203ENST00000391813 TACC3Q9Y6A5 838 aa21.43■■□□□ 1.02
SHANK1-203ENST00000391813 ATP10DQ9P241 1426 aa21.42■■□□□ 1.02
SHANK1-203ENST00000391813 KIF11P52732 1056 aa21.42■■□□□ 1.02
SHANK1-203ENST00000391813 GPBP1Q86WP2 473 aa21.42■■□□□ 1.02
SHANK1-203ENST00000391813 ATP8A2Q9NTI2 1148 aa21.42■■□□□ 1.02
SHANK1-203ENST00000391813 PABPC4Q13310 644 aaKnown RBP eCLIP21.42■■□□□ 1.02
SHANK1-203ENST00000391813 NAA35Q5VZE5 725 aa21.42■■□□□ 1.02
SHANK1-203ENST00000391813 RESP18Q5W5W9 173 aa21.42■■□□□ 1.02
SHANK1-203ENST00000391813 CXorf56Q9H5V9 222 aa21.42■■□□□ 1.02
SHANK1-203ENST00000391813 IFNB1P01574 187 aa21.42■■□□□ 1.02
SHANK1-203ENST00000391813 ERFEQ4G0M1 354 aa21.42■■□□□ 1.02
SHANK1-203ENST00000391813 TCP11X2Q5H9J9 407 aa21.42■■□□□ 1.02
SHANK1-203ENST00000391813 TRIM42Q8IWZ5 723 aa21.42■■□□□ 1.02
SHANK1-203ENST00000391813 KIDINS220Q9ULH0 1771 aa21.42■■□□□ 1.02
SHANK1-203ENST00000391813 MAP3K7O43318 606 aa21.41■■□□□ 1.02
SHANK1-203ENST00000391813 TFAP4Q01664 338 aa21.41■■□□□ 1.02
SHANK1-203ENST00000391813 MASTLQ96GX5 879 aa21.41■■□□□ 1.02
SHANK1-203ENST00000391813 KLC4Q9NSK0 619 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms