RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 ZBTB7AO95365 584 aa5.51□□□□□ -1.53
TRAV40-201ENST00000390467 HOXC12P31275 282 aa5.51□□□□□ -1.53
TRAV40-201ENST00000390467 BCL6P41182 706 aa5.51□□□□□ -1.53
TRAV40-201ENST00000390467 KCNJ6P48051 423 aa5.51□□□□□ -1.53
TRAV40-201ENST00000390467 KCNAB2Q13303 367 aa5.51□□□□□ -1.53
TRAV40-201ENST00000390467 TESK1Q15569 626 aa5.51□□□□□ -1.53
TRAV40-201ENST00000390467 ACBD5Q5T8D3 534 aaPredicted RBP5.51□□□□□ -1.53
TRAV40-201ENST00000390467 ANKS3Q6ZW76 656 aa5.51□□□□□ -1.53
TRAV40-201ENST00000390467 FAM26EQ8N5C1 309 aa5.51□□□□□ -1.53
TRAV40-201ENST00000390467 RCBTB1Q8NDN9 531 aa5.51□□□□□ -1.53
TRAV40-201ENST00000390467 DDX11Q96FC9 970 aa5.51□□□□□ -1.53
TRAV40-201ENST00000390467 TIMM13Q9Y5L4 95 aaPredicted RBP5.51□□□□□ -1.53
TRAV40-201ENST00000390467 KLF4O43474 513 aa5.5□□□□□ -1.53
TRAV40-201ENST00000390467 LTBRP36941 435 aa5.5□□□□□ -1.53
TRAV40-201ENST00000390467 PPP2R2AP63151 447 aa5.5□□□□□ -1.53
TRAV40-201ENST00000390467 SMAD4Q13485 552 aaKnown RBP5.5□□□□□ -1.53
TRAV40-201ENST00000390467 DDR2Q16832 855 aa5.5□□□□□ -1.53
TRAV40-201ENST00000390467 SLC35F1Q5T1Q4 408 aa5.5□□□□□ -1.53
TRAV40-201ENST00000390467 IQCEQ6IPM2 695 aa5.5□□□□□ -1.53
TRAV40-201ENST00000390467 EEPD1Q7L9B9 569 aa5.5□□□□□ -1.53
TRAV40-201ENST00000390467 MIB1Q86YT6 1006 aa5.5□□□□□ -1.53
TRAV40-201ENST00000390467 RIOX2Q8IUF8 465 aa5.5□□□□□ -1.53
TRAV40-201ENST00000390467 SLC43A3Q8NBI5 491 aa5.5□□□□□ -1.53
TRAV40-201ENST00000390467 GMLQ99445 158 aa5.5□□□□□ -1.53
TRAV40-201ENST00000390467 GORASP1Q9BQQ3 440 aa5.5□□□□□ -1.53
TRAV40-201ENST00000390467 KRTAP9-3Q9BYQ3 159 aa5.5□□□□□ -1.53
TRAV40-201ENST00000390467 AP5M1Q9H0R1 490 aa5.5□□□□□ -1.53
TRAV40-201ENST00000390467 SPATA6Q9NWH7 488 aaPredicted RBP5.5□□□□□ -1.53
TRAV40-201ENST00000390467 PALD1Q9ULE6 856 aa5.5□□□□□ -1.53
TRAV40-201ENST00000390467 X6R8D5 127 aa5.5□□□□□ -1.53
TRAV40-201ENST00000390467 A0A1W2PQU0 124 aa5.49□□□□□ -1.53
TRAV40-201ENST00000390467 CYP2C8P10632 490 aa5.49□□□□□ -1.53
TRAV40-201ENST00000390467 SLC6A11P48066 632 aa5.49□□□□□ -1.53
TRAV40-201ENST00000390467 KCNC1P48547 511 aa5.49□□□□□ -1.53
TRAV40-201ENST00000390467 CEP68Q76N32 757 aa5.49□□□□□ -1.53
TRAV40-201ENST00000390467 CXorf38Q8TB03 319 aa5.49□□□□□ -1.53
TRAV40-201ENST00000390467 SEC14L1Q92503 715 aa5.49□□□□□ -1.53
TRAV40-201ENST00000390467 ZBTB8AQ96BR9 441 aa5.49□□□□□ -1.53
TRAV40-201ENST00000390467 TEPSINQ96N21 525 aa5.49□□□□□ -1.53
TRAV40-201ENST00000390467 PCDHA2Q9Y5H9 948 aa5.49□□□□□ -1.53
TRAV40-201ENST00000390467 PRICKLE3O43900 615 aaPredicted RBP5.48□□□□□ -1.53
TRAV40-201ENST00000390467 CPP00450 1065 aa5.48□□□□□ -1.53
TRAV40-201ENST00000390467 STAT5AP42229 794 aa5.48□□□□□ -1.53
TRAV40-201ENST00000390467 KRTAP10-2P60368 255 aa5.48□□□□□ -1.53
TRAV40-201ENST00000390467 SKOR2Q2VWA4 1001 aaPredicted RBP5.48□□□□□ -1.53
TRAV40-201ENST00000390467 NT5DC1Q5TFE4 455 aa5.48□□□□□ -1.53
TRAV40-201ENST00000390467 MROH9Q5TGP6 573 aa5.48□□□□□ -1.53
TRAV40-201ENST00000390467 ETV3LQ6ZN32 361 aa5.48□□□□□ -1.53
TRAV40-201ENST00000390467 FRMD5Q7Z6J6 570 aa5.48□□□□□ -1.53
TRAV40-201ENST00000390467 MILR1Q7Z6M3 343 aa5.48□□□□□ -1.53
TRAV40-201ENST00000390467 CARFQ8N187 725 aa5.48□□□□□ -1.53
TRAV40-201ENST00000390467 LINC00482Q8N8I6 264 aa5.48□□□□□ -1.53
TRAV40-201ENST00000390467 TRMT2BQ96GJ1 504 aaKnown RBP5.48□□□□□ -1.53
TRAV40-201ENST00000390467 CCDC140Q96MF4 163 aa5.48□□□□□ -1.53
TRAV40-201ENST00000390467 IER2Q9BTL4 223 aa5.48□□□□□ -1.53
TRAV40-201ENST00000390467 KRTAP4-2Q9BYR5 136 aa5.48□□□□□ -1.53
TRAV40-201ENST00000390467 EPN3Q9H201 632 aa5.48□□□□□ -1.53
TRAV40-201ENST00000390467 MYO1BO43795 1136 aa5.47□□□□□ -1.53
TRAV40-201ENST00000390467 MSCO60682 206 aa5.47□□□□□ -1.53
TRAV40-201ENST00000390467 SYN1P17600 705 aa5.47□□□□□ -1.53
TRAV40-201ENST00000390467 STK32CQ86UX6 486 aa5.47□□□□□ -1.53
TRAV40-201ENST00000390467 FAM126BQ8IXS8 530 aa5.47□□□□□ -1.53
TRAV40-201ENST00000390467 TMEM169Q96HH4 297 aa5.47□□□□□ -1.53
TRAV40-201ENST00000390467 CDIP1Q9H305 208 aa5.47□□□□□ -1.53
TRAV40-201ENST00000390467 ARHGEF4Q9NR80 690 aa5.47□□□□□ -1.53
TRAV40-201ENST00000390467 PPARGC1AQ9UBK2 798 aaKnown RBP5.47□□□□□ -1.53
TRAV40-201ENST00000390467 NPFFR2Q9Y5X5 522 aa5.47□□□□□ -1.53
TRAV40-201ENST00000390467 DLX3O60479 287 aa5.46□□□□□ -1.54
TRAV40-201ENST00000390467 THBS2P35442 1172 aa5.46□□□□□ -1.54
TRAV40-201ENST00000390467 GTF2A2P52657 109 aa5.46□□□□□ -1.54
TRAV40-201ENST00000390467 ITGA1P56199 1179 aa5.46□□□□□ -1.54
TRAV40-201ENST00000390467 RBM10P98175 930 aaKnown RBP5.46□□□□□ -1.54
TRAV40-201ENST00000390467 MAP4K2Q12851 820 aa5.46□□□□□ -1.54
TRAV40-201ENST00000390467 CR1LQ2VPA4 569 aa5.46□□□□□ -1.54
TRAV40-201ENST00000390467 LCE5AQ5TCM9 118 aa5.46□□□□□ -1.54
TRAV40-201ENST00000390467 CD300LDQ6UXZ3 194 aa5.46□□□□□ -1.54
TRAV40-201ENST00000390467 C11orf84Q9BUA3 381 aaPredicted RBP5.46□□□□□ -1.54
TRAV40-201ENST00000390467 CLDND1Q9NY35 253 aa5.46□□□□□ -1.54
TRAV40-201ENST00000390467 ZNF652Q9Y2D9 606 aa5.46□□□□□ -1.54
TRAV40-201ENST00000390467 COA3Q9Y2R0 106 aaPredicted RBP5.46□□□□□ -1.54
TRAV40-201ENST00000390467 R3HCC1Q9Y3T6 440 aaKnown RBP5.46□□□□□ -1.54
TRAV40-201ENST00000390467 DUSP10Q9Y6W6 482 aa5.46□□□□□ -1.54
TRAV40-201ENST00000390467 H7BY64 318 aa5.45□□□□□ -1.54
TRAV40-201ENST00000390467 NOBOXO60393 691 aa5.45□□□□□ -1.54
TRAV40-201ENST00000390467 LSAMPQ13449 338 aa5.45□□□□□ -1.54
TRAV40-201ENST00000390467 RTP5Q14D33 572 aa5.45□□□□□ -1.54
TRAV40-201ENST00000390467 EMC4Q5J8M3 183 aa5.45□□□□□ -1.54
TRAV40-201ENST00000390467 ZNF761Q86XN6 746 aaPredicted RBP5.45□□□□□ -1.54
TRAV40-201ENST00000390467 ARRDC4Q8NCT1 418 aa5.45□□□□□ -1.54
TRAV40-201ENST00000390467 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.45□□□□□ -1.54
TRAV40-201ENST00000390467 KCTD13Q8WZ19 329 aa5.45□□□□□ -1.54
TRAV40-201ENST00000390467 CHAMP1Q96JM3 812 aa5.45□□□□□ -1.54
TRAV40-201ENST00000390467 KRTAP4-11Q9BYQ6 195 aa5.45□□□□□ -1.54
TRAV40-201ENST00000390467 NTMQ9P121 344 aa5.45□□□□□ -1.54
TRAV40-201ENST00000390467 AGRPO00253 132 aa5.44□□□□□ -1.54
TRAV40-201ENST00000390467 SARSP49591 514 aaKnown RBP5.44□□□□□ -1.54
TRAV40-201ENST00000390467 ADAM9Q13443 819 aa5.44□□□□□ -1.54
TRAV40-201ENST00000390467 RAB33AQ14088 237 aa5.44□□□□□ -1.54
TRAV40-201ENST00000390467 NTRK3Q16288 839 aa5.44□□□□□ -1.54
TRAV40-201ENST00000390467 YOD1Q5VVQ6 348 aaPredicted RBP5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms