RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 PTH1RQ03431 593 aa19.62■□□□□ 0.73
SMN2-201ENST00000380741 TRDNQ13061 729 aa19.62■□□□□ 0.73
SMN2-201ENST00000380741 DDX41Q9UJV9 622 aaKnown RBP19.62■□□□□ 0.73
SMN2-201ENST00000380741 ZBTB5O15062 677 aa19.61■□□□□ 0.73
SMN2-201ENST00000380741 EIF3JO75822 258 aaKnown RBP19.61■□□□□ 0.73
SMN2-201ENST00000380741 NR3C2P08235 984 aa19.61■□□□□ 0.73
SMN2-201ENST00000380741 IQCF3P0C7M6 154 aa19.61■□□□□ 0.73
SMN2-201ENST00000380741 MYOGP15173 224 aa19.61■□□□□ 0.73
SMN2-201ENST00000380741 ATP2A2P16615 1042 aaKnown RBP19.61■□□□□ 0.73
SMN2-201ENST00000380741 CHMLP26374 656 aa19.61■□□□□ 0.73
SMN2-201ENST00000380741 RFC2P35250 354 aa19.61■□□□□ 0.73
SMN2-201ENST00000380741 GHRHRQ02643 423 aa19.61■□□□□ 0.73
SMN2-201ENST00000380741 ADGRE1Q14246 886 aa19.61■□□□□ 0.73
SMN2-201ENST00000380741 KAT2BQ92831 832 aa19.61■□□□□ 0.73
SMN2-201ENST00000380741 NOD1Q9Y239 953 aa19.61■□□□□ 0.73
SMN2-201ENST00000380741 PCDHA1Q9Y5I3 950 aa19.61■□□□□ 0.73
SMN2-201ENST00000380741 TAF6LQ9Y6J9 622 aa19.61■□□□□ 0.73
SMN2-201ENST00000380741 U3KPZ7 1027 aaPredicted RBP19.61■□□□□ 0.73
SMN2-201ENST00000380741 TRANK1O15050 2925 aa19.61■□□□□ 0.73
SMN2-201ENST00000380741 BFSP2Q13515 415 aa19.6■□□□□ 0.73
SMN2-201ENST00000380741 PTGISQ16647 500 aa19.6■□□□□ 0.73
SMN2-201ENST00000380741 SLC35G1Q2M3R5 365 aa19.6■□□□□ 0.73
SMN2-201ENST00000380741 PPP2R2DQ66LE6 453 aa19.6■□□□□ 0.73
SMN2-201ENST00000380741 HOMER1Q86YM7 354 aa19.6■□□□□ 0.73
SMN2-201ENST00000380741 RETREG2Q8NC44 543 aa19.6■□□□□ 0.73
SMN2-201ENST00000380741 RUFY2Q8WXA3 655 aa19.6■□□□□ 0.73
SMN2-201ENST00000380741 PPM1EQ8WY54 764 aa19.6■□□□□ 0.73
SMN2-201ENST00000380741 CTAGE1Q96RT6 745 aa19.6■□□□□ 0.73
SMN2-201ENST00000380741 SENP2Q9HC62 589 aa19.6■□□□□ 0.73
SMN2-201ENST00000380741 PRDM6Q9NQX0 595 aa19.6■□□□□ 0.73
SMN2-201ENST00000380741 PCDHA11Q9Y5I1 949 aa19.6■□□□□ 0.73
SMN2-201ENST00000380741 MRVI1Q9Y6F6 885 aa19.6■□□□□ 0.73
SMN2-201ENST00000380741 XIRP2A4UGR9 3374 aa19.6■□□□□ 0.73
SMN2-201ENST00000380741 IFIT3O14879 490 aaKnown RBP19.59■□□□□ 0.73
SMN2-201ENST00000380741 ACTN1P12814 892 aa19.59■□□□□ 0.73
SMN2-201ENST00000380741 CASTP20810 708 aaKnown RBP19.59■□□□□ 0.73
SMN2-201ENST00000380741 GRM4Q14833 912 aa19.59■□□□□ 0.73
SMN2-201ENST00000380741 DGKDQ16760 1214 aa19.59■□□□□ 0.73
SMN2-201ENST00000380741 GDF6Q6KF10 455 aaPredicted RBP19.59■□□□□ 0.73
SMN2-201ENST00000380741 SESTD1Q86VW0 696 aa19.59■□□□□ 0.73
SMN2-201ENST00000380741 EMID1Q96A84 441 aaPredicted RBP19.59■□□□□ 0.73
SMN2-201ENST00000380741 PDCD2LQ9BRP1 358 aa19.59■□□□□ 0.73
SMN2-201ENST00000380741 RGS20O76081 388 aa19.58■□□□□ 0.72
SMN2-201ENST00000380741 MYCLP12524 364 aaPredicted RBP19.58■□□□□ 0.72
SMN2-201ENST00000380741 IGFBP4P22692 258 aa19.58■□□□□ 0.72
SMN2-201ENST00000380741 HOXA13P31271 388 aaPredicted RBP19.58■□□□□ 0.72
SMN2-201ENST00000380741 IRX6P78412 446 aaPredicted RBP19.58■□□□□ 0.72
SMN2-201ENST00000380741 STOX1Q6ZVD7 989 aa19.58■□□□□ 0.72
SMN2-201ENST00000380741 PIGSQ96S52 555 aa19.58■□□□□ 0.72
SMN2-201ENST00000380741 RIOX1Q9H6W3 641 aa19.58■□□□□ 0.72
SMN2-201ENST00000380741 MAP3K20Q9NYL2 800 aaKnown RBP19.58■□□□□ 0.72
SMN2-201ENST00000380741 PTPRSQ13332 1948 aa19.58■□□□□ 0.72
SMN2-201ENST00000380741 ERICH2A1L162 156 aa19.57■□□□□ 0.72
SMN2-201ENST00000380741 E7EWF7 191 aa19.57■□□□□ 0.72
SMN2-201ENST00000380741 SGSM2O43147 1006 aa19.57■□□□□ 0.72
SMN2-201ENST00000380741 CYTH3O43739 400 aa19.57■□□□□ 0.72
SMN2-201ENST00000380741 ZNF286BP0CG31 522 aa19.57■□□□□ 0.72
SMN2-201ENST00000380741 TROAPQ12815 778 aa19.57■□□□□ 0.72
SMN2-201ENST00000380741 LAMC2Q13753 1193 aa19.57■□□□□ 0.72
SMN2-201ENST00000380741 CCDC85BQ15834 202 aaPredicted RBP19.57■□□□□ 0.72
SMN2-201ENST00000380741 RALYLQ86SE5 291 aaKnown RBP19.57■□□□□ 0.72
SMN2-201ENST00000380741 CCDC155Q8N6L0 562 aa19.57■□□□□ 0.72
SMN2-201ENST00000380741 IL31RAQ8NI17 732 aa19.57■□□□□ 0.72
SMN2-201ENST00000380741 PPTC7Q8NI37 304 aa19.57■□□□□ 0.72
SMN2-201ENST00000380741 CAGE1Q8TC20 777 aa19.57■□□□□ 0.72
SMN2-201ENST00000380741 AFAP1L1Q8TED9 768 aa19.57■□□□□ 0.72
SMN2-201ENST00000380741 SLC9A7Q96T83 725 aa19.57■□□□□ 0.72
SMN2-201ENST00000380741 FTOQ9C0B1 505 aaKnown RBP eCLIP19.57■□□□□ 0.72
SMN2-201ENST00000380741 CA3P07451 260 aa19.56■□□□□ 0.72
SMN2-201ENST00000380741 PSEN2P49810 448 aa19.56■□□□□ 0.72
SMN2-201ENST00000380741 WTAPQ15007 396 aa19.56■□□□□ 0.72
SMN2-201ENST00000380741 PGM5Q15124 567 aa19.56■□□□□ 0.72
SMN2-201ENST00000380741 TMEM67Q5HYA8 995 aa19.56■□□□□ 0.72
SMN2-201ENST00000380741 TJAP1Q5JTD0 557 aa19.56■□□□□ 0.72
SMN2-201ENST00000380741 VSIG10LQ86VR7 867 aa19.56■□□□□ 0.72
SMN2-201ENST00000380741 DHX37Q8IY37 1157 aaKnown RBP19.56■□□□□ 0.72
SMN2-201ENST00000380741 NCOA7Q8NI08 942 aa19.56■□□□□ 0.72
SMN2-201ENST00000380741 DHX38Q92620 1227 aaKnown RBP19.56■□□□□ 0.72
SMN2-201ENST00000380741 SYMPKQ92797 1274 aaKnown RBP19.56■□□□□ 0.72
SMN2-201ENST00000380741 HDAC6Q9UBN7 1215 aa19.56■□□□□ 0.72
SMN2-201ENST00000380741 GTF2IRD1Q9UHL9 959 aa19.56■□□□□ 0.72
SMN2-201ENST00000380741 GCOM1H8Y6P7 765 aaPredicted RBP19.55■□□□□ 0.72
SMN2-201ENST00000380741 F2P00734 622 aa19.55■□□□□ 0.72
SMN2-201ENST00000380741 POLR2MP0CAP2 368 aa19.55■□□□□ 0.72
SMN2-201ENST00000380741 MFSD10Q14728 455 aa19.55■□□□□ 0.72
SMN2-201ENST00000380741 SART3Q15020 963 aaKnown RBP19.55■□□□□ 0.72
SMN2-201ENST00000380741 MYSM1Q5VVJ2 828 aa19.55■□□□□ 0.72
SMN2-201ENST00000380741 SAMD3Q8N6K7 520 aa19.55■□□□□ 0.72
SMN2-201ENST00000380741 C7orf31Q8N865 590 aa19.55■□□□□ 0.72
SMN2-201ENST00000380741 ALG1Q9BT22 464 aa19.55■□□□□ 0.72
SMN2-201ENST00000380741 KATNAL1Q9BW62 490 aa19.55■□□□□ 0.72
SMN2-201ENST00000380741 HAS3O00219 553 aa19.54■□□□□ 0.72
SMN2-201ENST00000380741 SORBS3O60504 671 aa19.54■□□□□ 0.72
SMN2-201ENST00000380741 HOXD8P13378 290 aaPredicted RBP19.54■□□□□ 0.72
SMN2-201ENST00000380741 SELPP16109 830 aa19.54■□□□□ 0.72
SMN2-201ENST00000380741 ANTXR2P58335 489 aa19.54■□□□□ 0.72
SMN2-201ENST00000380741 TRAF1Q13077 416 aa19.54■□□□□ 0.72
SMN2-201ENST00000380741 GPNMBQ14956 572 aa19.54■□□□□ 0.72
SMN2-201ENST00000380741 KIAA0753Q2KHM9 967 aa19.54■□□□□ 0.72
SMN2-201ENST00000380741 KCNV1Q6PIU1 500 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms