RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 SAMD3Q8N6K7 520 aa16.51■□□□□ 0.23
NELFE-201ENST00000375425 PDCD2LQ9BRP1 358 aa16.51■□□□□ 0.23
NELFE-201ENST00000375425 PBX4Q9BYU1 374 aa16.51■□□□□ 0.23
NELFE-201ENST00000375425 ZNF576Q9H609 170 aa16.51■□□□□ 0.23
NELFE-201ENST00000375425 GCOM1H8Y6P7 765 aaPredicted RBP16.5■□□□□ 0.23
NELFE-201ENST00000375425 MMP3P08254 477 aa16.5■□□□□ 0.23
NELFE-201ENST00000375425 POLR2MP0CAP2 368 aa16.5■□□□□ 0.23
NELFE-201ENST00000375425 CASTP20810 708 aaKnown RBP16.5■□□□□ 0.23
NELFE-201ENST00000375425 PTPN11Q06124 597 aaPredicted RBP16.5■□□□□ 0.23
NELFE-201ENST00000375425 VSIG10LQ86VR7 867 aa16.5■□□□□ 0.23
NELFE-201ENST00000375425 PIBF1Q8WXW3 757 aa16.5■□□□□ 0.23
NELFE-201ENST00000375425 VWCEQ96DN2 955 aa16.5■□□□□ 0.23
NELFE-201ENST00000375425 LSG1Q9H089 658 aaKnown RBP16.5■□□□□ 0.23
NELFE-201ENST00000375425 MTIF3Q9H2K0 278 aaKnown RBP16.5■□□□□ 0.23
NELFE-201ENST00000375425 LY9Q9HBG7 655 aa16.5■□□□□ 0.23
NELFE-201ENST00000375425 MRVI1Q9Y6F6 885 aa16.5■□□□□ 0.23
NELFE-201ENST00000375425 CHD9Q3L8U1 2897 aa16.49■□□□□ 0.23
NELFE-201ENST00000375425 RGS20O76081 388 aa16.49■□□□□ 0.23
NELFE-201ENST00000375425 FOSL2P15408 326 aa16.49■□□□□ 0.23
NELFE-201ENST00000375425 LAMC2Q13753 1193 aa16.49■□□□□ 0.23
NELFE-201ENST00000375425 PGM5Q15124 567 aa16.49■□□□□ 0.23
NELFE-201ENST00000375425 DGKDQ16760 1214 aa16.49■□□□□ 0.23
NELFE-201ENST00000375425 CASC1Q6TDU7 716 aa16.49■□□□□ 0.23
NELFE-201ENST00000375425 FCHSD1Q86WN1 690 aa16.49■□□□□ 0.23
NELFE-201ENST00000375425 MAFAQ8NHW3 353 aaPredicted RBP16.49■□□□□ 0.23
NELFE-201ENST00000375425 KAT2BQ92831 832 aa16.49■□□□□ 0.23
NELFE-201ENST00000375425 ESYT1Q9BSJ8 1104 aa16.49■□□□□ 0.23
NELFE-201ENST00000375425 PRC1O43663 620 aa16.48■□□□□ 0.23
NELFE-201ENST00000375425 DEFB128Q7Z7B8 93 aa16.48■□□□□ 0.23
NELFE-201ENST00000375425 DHX37Q8IY37 1157 aaKnown RBP16.48■□□□□ 0.23
NELFE-201ENST00000375425 ZNF654Q8IZM8 581 aa16.48■□□□□ 0.23
NELFE-201ENST00000375425 EMID1Q96A84 441 aaPredicted RBP16.48■□□□□ 0.23
NELFE-201ENST00000375425 ZFP91Q96JP5 570 aaPredicted RBP16.48■□□□□ 0.23
NELFE-201ENST00000375425 MAP3K14Q99558 947 aa16.48■□□□□ 0.23
NELFE-201ENST00000375425 MYL10Q9BUA6 226 aa16.48■□□□□ 0.23
NELFE-201ENST00000375425 NOD1Q9Y239 953 aa16.48■□□□□ 0.23
NELFE-201ENST00000375425 SLC27A2O14975 620 aa16.47■□□□□ 0.23
NELFE-201ENST00000375425 MCM5P33992 734 aa16.47■□□□□ 0.23
NELFE-201ENST00000375425 COL9A3Q14050 684 aaPredicted RBP16.47■□□□□ 0.23
NELFE-201ENST00000375425 PTGISQ16647 500 aa16.47■□□□□ 0.23
NELFE-201ENST00000375425 SKAP1Q86WV1 359 aa16.47■□□□□ 0.23
NELFE-201ENST00000375425 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.47■□□□□ 0.23
NELFE-201ENST00000375425 TMTC2Q8N394 836 aa16.47■□□□□ 0.23
NELFE-201ENST00000375425 RETREG2Q8NC44 543 aa16.47■□□□□ 0.23
NELFE-201ENST00000375425 IL31RAQ8NI17 732 aa16.47■□□□□ 0.23
NELFE-201ENST00000375425 PPTC7Q8NI37 304 aa16.47■□□□□ 0.23
NELFE-201ENST00000375425 CTCFLQ8NI51 663 aaPredicted RBP16.47■□□□□ 0.23
NELFE-201ENST00000375425 MTA3Q9BTC8 594 aa16.47■□□□□ 0.23
NELFE-201ENST00000375425 MSRAQ9UJ68 235 aa16.47■□□□□ 0.23
NELFE-201ENST00000375425 SLC4A7Q9Y6M7 1214 aa16.47■□□□□ 0.23
NELFE-201ENST00000375425 SCN10AQ9Y5Y9 1956 aa16.47■□□□□ 0.23
NELFE-201ENST00000375425 ZBBXA8MT70 800 aa16.46■□□□□ 0.23
NELFE-201ENST00000375425 PITPNM1O00562 1244 aa16.46■□□□□ 0.23
NELFE-201ENST00000375425 PFKMP08237 780 aa16.46■□□□□ 0.23
NELFE-201ENST00000375425 IQCF3P0C7M6 154 aa16.46■□□□□ 0.23
NELFE-201ENST00000375425 KIF5BP33176 963 aa16.46■□□□□ 0.23
NELFE-201ENST00000375425 SP2Q02086 613 aa16.46■□□□□ 0.23
NELFE-201ENST00000375425 NECTIN1Q15223 517 aa16.46■□□□□ 0.23
NELFE-201ENST00000375425 MYSM1Q5VVJ2 828 aa16.46■□□□□ 0.23
NELFE-201ENST00000375425 CREB3L3Q68CJ9 461 aa16.46■□□□□ 0.23
NELFE-201ENST00000375425 GDF6Q6KF10 455 aaPredicted RBP16.46■□□□□ 0.23
NELFE-201ENST00000375425 KCNV1Q6PIU1 500 aa16.46■□□□□ 0.23
NELFE-201ENST00000375425 NFXL1Q6ZNB6 911 aa16.46■□□□□ 0.23
NELFE-201ENST00000375425 ANO2Q9NQ90 1003 aa16.46■□□□□ 0.23
NELFE-201ENST00000375425 CHD7Q9P2D1 2997 aa16.46■□□□□ 0.23
NELFE-201ENST00000375425 BAZ2BQ9UIF8 2168 aaKnown RBP16.46■□□□□ 0.23
NELFE-201ENST00000375425 CCDC69A6NI79 296 aa16.45■□□□□ 0.22
NELFE-201ENST00000375425 SORBS3O60504 671 aa16.45■□□□□ 0.22
NELFE-201ENST00000375425 DDAH1O94760 285 aa16.45■□□□□ 0.22
NELFE-201ENST00000375425 TGFB3P10600 412 aa16.45■□□□□ 0.22
NELFE-201ENST00000375425 SMARCA1P28370 1054 aa16.45■□□□□ 0.22
NELFE-201ENST00000375425 CCND2P30279 289 aa16.45■□□□□ 0.22
NELFE-201ENST00000375425 BFSP2Q13515 415 aa16.45■□□□□ 0.22
NELFE-201ENST00000375425 RAB30Q15771 203 aa16.45■□□□□ 0.22
NELFE-201ENST00000375425 HSDL1Q3SXM5 330 aa16.45■□□□□ 0.22
NELFE-201ENST00000375425 CELF3Q5SZQ8 465 aaKnown RBP16.45■□□□□ 0.22
NELFE-201ENST00000375425 SESTD1Q86VW0 696 aa16.45■□□□□ 0.22
NELFE-201ENST00000375425 RRP36Q96EU6 259 aaKnown RBP16.45■□□□□ 0.22
NELFE-201ENST00000375425 TMEM87BQ96K49 555 aa16.45■□□□□ 0.22
NELFE-201ENST00000375425 CTAGE1Q96RT6 745 aa16.45■□□□□ 0.22
NELFE-201ENST00000375425 SPZ1Q9BXG8 430 aa16.45■□□□□ 0.22
NELFE-201ENST00000375425 HDAC6Q9UBN7 1215 aa16.45■□□□□ 0.22
NELFE-201ENST00000375425 MYH6P13533 1939 aa16.45■□□□□ 0.22
NELFE-201ENST00000375425 SH2B2O14492 632 aaPredicted RBP16.45■□□□□ 0.22
NELFE-201ENST00000375425 PPFIA4O75335 1185 aa16.45■□□□□ 0.22
NELFE-201ENST00000375425 GGPS1O95749 300 aa16.45■□□□□ 0.22
NELFE-201ENST00000375425 RFC2P35250 354 aa16.45■□□□□ 0.22
NELFE-201ENST00000375425 LIFRP42702 1097 aa16.45■□□□□ 0.22
NELFE-201ENST00000375425 PSEN2P49810 448 aa16.45■□□□□ 0.22
NELFE-201ENST00000375425 RABGGTBP53611 331 aa16.45■□□□□ 0.22
NELFE-201ENST00000375425 CENPQQ7L2Z9 268 aaPredicted RBP16.45■□□□□ 0.22
NELFE-201ENST00000375425 SRBD1Q8N5C6 995 aaKnown RBP16.45■□□□□ 0.22
NELFE-201ENST00000375425 C7orf31Q8N865 590 aa16.45■□□□□ 0.22
NELFE-201ENST00000375425 GPKOWQ92917 476 aaPredicted RBP eCLIP16.45■□□□□ 0.22
NELFE-201ENST00000375425 SPATA33Q96N06 139 aa16.45■□□□□ 0.22
NELFE-201ENST00000375425 LZTS2Q9BRK4 669 aa16.45■□□□□ 0.22
NELFE-201ENST00000375425 ALG1Q9BT22 464 aa16.45■□□□□ 0.22
NELFE-201ENST00000375425 KATNAL1Q9BW62 490 aa16.45■□□□□ 0.22
NELFE-201ENST00000375425 GTF2IRD1Q9UHL9 959 aa16.45■□□□□ 0.22
NELFE-201ENST00000375425 PLEKHA8P1O95397 391 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 155.3 ms