RNA–Protein interactions for RNA: ENST00000363237.1

RNU6-1249P-201, Transcript of RNA, U6 small nuclear 1249, pseudogene, humanhuman

BASIC

Gene RNU6-1249P, Length 111 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1249P-201ENST00000363237 SERPINB3P29508 390 aa4.64□□□□□ -1.67
RNU6-1249P-201ENST00000363237 PPM1FP49593 454 aaPredicted RBP4.64□□□□□ -1.67
RNU6-1249P-201ENST00000363237 AK2P54819 239 aa4.64□□□□□ -1.67
RNU6-1249P-201ENST00000363237 PHC1P78364 1004 aa4.64□□□□□ -1.67
RNU6-1249P-201ENST00000363237 KCNAB2Q13303 367 aa4.64□□□□□ -1.67
RNU6-1249P-201ENST00000363237 GAS6Q14393 721 aa4.64□□□□□ -1.67
RNU6-1249P-201ENST00000363237 MAPRE1Q15691 268 aaKnown RBP4.64□□□□□ -1.67
RNU6-1249P-201ENST00000363237 IFIT1BQ5T764 474 aaKnown RBP4.64□□□□□ -1.67
RNU6-1249P-201ENST00000363237 WDR78Q5VTH9 848 aa4.64□□□□□ -1.67
RNU6-1249P-201ENST00000363237 ANO1Q5XXA6 986 aa4.64□□□□□ -1.67
RNU6-1249P-201ENST00000363237 GPAT2Q6NUI2 795 aa4.64□□□□□ -1.67
RNU6-1249P-201ENST00000363237 B3GNT9Q6UX72 402 aa4.64□□□□□ -1.67
RNU6-1249P-201ENST00000363237 C16orf59Q7L2K0 433 aa4.64□□□□□ -1.67
RNU6-1249P-201ENST00000363237 OTOP1Q7RTM1 612 aa4.64□□□□□ -1.67
RNU6-1249P-201ENST00000363237 PODNQ7Z5L7 613 aa4.64□□□□□ -1.67
RNU6-1249P-201ENST00000363237 CATIPQ7Z7H3 387 aa4.64□□□□□ -1.67
RNU6-1249P-201ENST00000363237 PCGF5Q86SE9 256 aa4.64□□□□□ -1.67
RNU6-1249P-201ENST00000363237 TEX2Q8IWB9 1127 aa4.64□□□□□ -1.67
RNU6-1249P-201ENST00000363237 FAM186BQ8IYM0 893 aa4.64□□□□□ -1.67
RNU6-1249P-201ENST00000363237 CPXCR1Q8N123 301 aa4.64□□□□□ -1.67
RNU6-1249P-201ENST00000363237 ANKRD42Q8N9B4 389 aa4.64□□□□□ -1.67
RNU6-1249P-201ENST00000363237 DIO2Q92813 273 aa4.64□□□□□ -1.67
RNU6-1249P-201ENST00000363237 FBXW5Q969U6 566 aa4.64□□□□□ -1.67
RNU6-1249P-201ENST00000363237 COX4I2Q96KJ9 171 aa4.64□□□□□ -1.67
RNU6-1249P-201ENST00000363237 MYD88Q99836 296 aa4.64□□□□□ -1.67
RNU6-1249P-201ENST00000363237 ASCC2Q9H1I8 757 aaPredicted RBP4.64□□□□□ -1.67
RNU6-1249P-201ENST00000363237 CHST7Q9NS84 486 aa4.64□□□□□ -1.67
RNU6-1249P-201ENST00000363237 OXSMQ9NWU1 459 aa4.64□□□□□ -1.67
RNU6-1249P-201ENST00000363237 ZNF69Q9UC07 566 aa4.64□□□□□ -1.67
RNU6-1249P-201ENST00000363237 FBXO9Q9UK97 447 aaPredicted RBP4.64□□□□□ -1.67
RNU6-1249P-201ENST00000363237 INVSQ9Y283 1065 aa4.64□□□□□ -1.67
RNU6-1249P-201ENST00000363237 PCDHGA9Q9Y5G4 932 aaKnown RBP4.64□□□□□ -1.67
RNU6-1249P-201ENST00000363237 PCDHGA8Q9Y5G5 932 aa4.64□□□□□ -1.67
RNU6-1249P-201ENST00000363237 PCDHGA7Q9Y5G6 932 aa4.64□□□□□ -1.67
RNU6-1249P-201ENST00000363237 PCDHGA6Q9Y5G7 932 aa4.64□□□□□ -1.67
RNU6-1249P-201ENST00000363237 PCDHGA3Q9Y5H0 932 aa4.64□□□□□ -1.67
RNU6-1249P-201ENST00000363237 PCDHGA2Q9Y5H1 932 aa4.64□□□□□ -1.67
RNU6-1249P-201ENST00000363237 PPP2R3BQ9Y5P8 575 aa4.64□□□□□ -1.67
RNU6-1249P-201ENST00000363237 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.63□□□□□ -1.67
RNU6-1249P-201ENST00000363237 CCDC66A2RUB6 948 aa4.63□□□□□ -1.67
RNU6-1249P-201ENST00000363237 GOLGA8AA7E2F4 631 aa4.63□□□□□ -1.67
RNU6-1249P-201ENST00000363237 GOLGA8BA8MQT2 603 aa4.63□□□□□ -1.67
RNU6-1249P-201ENST00000363237 FAM47E-STBD1D6RA91 191 aa4.63□□□□□ -1.67
RNU6-1249P-201ENST00000363237 H0Y8X5 98 aa4.63□□□□□ -1.67
RNU6-1249P-201ENST00000363237 H7C1D1 291 aa4.63□□□□□ -1.67
RNU6-1249P-201ENST00000363237 OFD1O75665 1012 aa4.63□□□□□ -1.67
RNU6-1249P-201ENST00000363237 SOD2P04179 222 aa4.63□□□□□ -1.67
RNU6-1249P-201ENST00000363237 GRK2P25098 689 aa4.63□□□□□ -1.67
RNU6-1249P-201ENST00000363237 LSP1P33241 339 aa4.63□□□□□ -1.67
RNU6-1249P-201ENST00000363237 HALP42357 657 aa4.63□□□□□ -1.67
RNU6-1249P-201ENST00000363237 TRAPPC10P48553 1259 aa4.63□□□□□ -1.67
RNU6-1249P-201ENST00000363237 DNM2P50570 870 aa4.63□□□□□ -1.67
RNU6-1249P-201ENST00000363237 FOXD4Q12950 439 aaPredicted RBP4.63□□□□□ -1.67
RNU6-1249P-201ENST00000363237 CHAF1AQ13111 956 aaPredicted RBP4.63□□□□□ -1.67
RNU6-1249P-201ENST00000363237 SNW1Q13573 536 aaKnown RBP4.63□□□□□ -1.67
RNU6-1249P-201ENST00000363237 GALEQ14376 348 aa4.63□□□□□ -1.67
RNU6-1249P-201ENST00000363237 SLC9A5Q14940 896 aa4.63□□□□□ -1.67
RNU6-1249P-201ENST00000363237 TERF2Q15554 542 aa4.63□□□□□ -1.67
RNU6-1249P-201ENST00000363237 CCDC70Q6NSX1 233 aa4.63□□□□□ -1.67
RNU6-1249P-201ENST00000363237 C8orf86Q6ZUL3 223 aa4.63□□□□□ -1.67
RNU6-1249P-201ENST00000363237 STK11IPQ8N1F8 1099 aa4.63□□□□□ -1.67
RNU6-1249P-201ENST00000363237 C12orf50Q8NA57 414 aaPredicted RBP4.63□□□□□ -1.67
RNU6-1249P-201ENST00000363237 ACRBPQ8NEB7 543 aa4.63□□□□□ -1.67
RNU6-1249P-201ENST00000363237 SSH1Q8WYL5 1049 aa4.63□□□□□ -1.67
RNU6-1249P-201ENST00000363237 SELENOOQ9BVL4 669 aa4.63□□□□□ -1.67
RNU6-1249P-201ENST00000363237 RNF38Q9H0F5 515 aa4.63□□□□□ -1.67
RNU6-1249P-201ENST00000363237 SLC12A5Q9H2X9 1139 aa4.63□□□□□ -1.67
RNU6-1249P-201ENST00000363237 GPRC5CQ9NQ84 441 aa4.63□□□□□ -1.67
RNU6-1249P-201ENST00000363237 GPATCH2Q9NW75 528 aa4.63□□□□□ -1.67
RNU6-1249P-201ENST00000363237 KCNH3Q9ULD8 1083 aa4.63□□□□□ -1.67
RNU6-1249P-201ENST00000363237 NOC2LQ9Y3T9 749 aaKnown RBP4.63□□□□□ -1.67
RNU6-1249P-201ENST00000363237 LAS1LQ9Y4W2 734 aaKnown RBP4.63□□□□□ -1.67
RNU6-1249P-201ENST00000363237 IGF1RP08069 1367 aa4.63□□□□□ -1.67
RNU6-1249P-201ENST00000363237 TRBV23OR9-2A0A075B6M9 112 aa4.62□□□□□ -1.67
RNU6-1249P-201ENST00000363237 FAM181BA6NEQ2 426 aa4.62□□□□□ -1.67
RNU6-1249P-201ENST00000363237 STXBP3O00186 592 aa4.62□□□□□ -1.67
RNU6-1249P-201ENST00000363237 ST8SIA5O15466 376 aa4.62□□□□□ -1.67
RNU6-1249P-201ENST00000363237 TGM5O43548 720 aa4.62□□□□□ -1.67
RNU6-1249P-201ENST00000363237 AP1G1O43747 822 aa4.62□□□□□ -1.67
RNU6-1249P-201ENST00000363237 MSCO60682 206 aa4.62□□□□□ -1.67
RNU6-1249P-201ENST00000363237 DEAF1O75398 565 aaPredicted RBP4.62□□□□□ -1.67
RNU6-1249P-201ENST00000363237 SLITRK5O94991 958 aa4.62□□□□□ -1.67
RNU6-1249P-201ENST00000363237 TIAF1O95411 115 aa4.62□□□□□ -1.67
RNU6-1249P-201ENST00000363237 ZBED1O96006 694 aa4.62□□□□□ -1.67
RNU6-1249P-201ENST00000363237 CD3EP07766 207 aa4.62□□□□□ -1.67
RNU6-1249P-201ENST00000363237 HSP90AA1P07900 732 aaKnown RBP4.62□□□□□ -1.67
RNU6-1249P-201ENST00000363237 SETSIPP0DME0 302 aa4.62□□□□□ -1.67
RNU6-1249P-201ENST00000363237 COL6A1P12109 1028 aa4.62□□□□□ -1.67
RNU6-1249P-201ENST00000363237 YBX3P16989 372 aaKnown RBP eCLIP4.62□□□□□ -1.67
RNU6-1249P-201ENST00000363237 TYRP1P17643 537 aa4.62□□□□□ -1.67
RNU6-1249P-201ENST00000363237 RHCEP18577 417 aa4.62□□□□□ -1.67
RNU6-1249P-201ENST00000363237 BDNFP23560 247 aa4.62□□□□□ -1.67
RNU6-1249P-201ENST00000363237 MAN1A1P33908 653 aa4.62□□□□□ -1.67
RNU6-1249P-201ENST00000363237 GPR3P46089 330 aa4.62□□□□□ -1.67
RNU6-1249P-201ENST00000363237 SEPHS1P49903 392 aa4.62□□□□□ -1.67
RNU6-1249P-201ENST00000363237 USP14P54578 494 aa4.62□□□□□ -1.67
RNU6-1249P-201ENST00000363237 SCAND1P57086 179 aa4.62□□□□□ -1.67
RNU6-1249P-201ENST00000363237 IRX6P78412 446 aaPredicted RBP4.62□□□□□ -1.67
RNU6-1249P-201ENST00000363237 HTRA3P83110 453 aa4.62□□□□□ -1.67
RNU6-1249P-201ENST00000363237 LACTBP83111 547 aaPredicted RBP4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms