RNA–Protein interactions for RNA: ENST00000334409.9

PDCD1-201, Transcript of programmed cell death 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD1, Length 2,114 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD1-201ENST00000334409 CCDC102AQ96A19 550 aa18.93■□□□□ 0.62
PDCD1-201ENST00000334409 ZNF408Q9H9D4 720 aa18.93■□□□□ 0.62
PDCD1-201ENST00000334409 HOOK1Q9UJC3 728 aaKnown RBP18.93■□□□□ 0.62
PDCD1-201ENST00000334409 KCNH3Q9ULD8 1083 aa18.93■□□□□ 0.62
PDCD1-201ENST00000334409 MCM3P25205 808 aa18.92■□□□□ 0.62
PDCD1-201ENST00000334409 TBX2Q13207 712 aaPredicted RBP18.92■□□□□ 0.62
PDCD1-201ENST00000334409 TTLL12Q14166 644 aaPredicted RBP18.92■□□□□ 0.62
PDCD1-201ENST00000334409 NOSTRINQ8IVI9 506 aa18.92■□□□□ 0.62
PDCD1-201ENST00000334409 HOOK2Q96ED9 719 aa18.92■□□□□ 0.62
PDCD1-201ENST00000334409 CLIC6Q96NY7 704 aa18.92■□□□□ 0.62
PDCD1-201ENST00000334409 FAM204AQ9H8W3 233 aa18.92■□□□□ 0.62
PDCD1-201ENST00000334409 ZNF112Q9UJU3 913 aa18.92■□□□□ 0.62
PDCD1-201ENST00000334409 KCNJ14Q9UNX9 436 aa18.92■□□□□ 0.62
PDCD1-201ENST00000334409 MYH6P13533 1939 aa18.92■□□□□ 0.62
PDCD1-201ENST00000334409 SNHG28P0DPA3 235 aa18.92■□□□□ 0.62
PDCD1-201ENST00000334409 ZNF543Q08ER8 600 aa18.92■□□□□ 0.62
PDCD1-201ENST00000334409 LONRF3Q496Y0 759 aa18.92■□□□□ 0.62
PDCD1-201ENST00000334409 ISM2Q6H9L7 571 aa18.92■□□□□ 0.62
PDCD1-201ENST00000334409 SHISA4Q96DD7 197 aa18.92■□□□□ 0.62
PDCD1-201ENST00000334409 RNF26Q9BY78 433 aaPredicted RBP18.92■□□□□ 0.62
PDCD1-201ENST00000334409 ABCB6Q9NP58 842 aa18.92■□□□□ 0.62
PDCD1-201ENST00000334409 VPS54Q9P1Q0 977 aa18.92■□□□□ 0.62
PDCD1-201ENST00000334409 ATXN2Q99700 1313 aaKnown RBP18.91■□□□□ 0.62
PDCD1-201ENST00000334409 PRPF3O43395 683 aaKnown RBP18.91■□□□□ 0.62
PDCD1-201ENST00000334409 DEXIO95424 95 aa18.91■□□□□ 0.62
PDCD1-201ENST00000334409 MMP1P03956 469 aa18.91■□□□□ 0.62
PDCD1-201ENST00000334409 MNAT1P51948 309 aa18.91■□□□□ 0.62
PDCD1-201ENST00000334409 SAFBQ15424 915 aaKnown RBP eCLIP18.91■□□□□ 0.62
PDCD1-201ENST00000334409 SAMD1Q6SPF0 538 aaPredicted RBP18.91■□□□□ 0.62
PDCD1-201ENST00000334409 SCYL3Q8IZE3 742 aa18.91■□□□□ 0.62
PDCD1-201ENST00000334409 FAM177A1Q8N128 213 aaPredicted RBP18.91■□□□□ 0.62
PDCD1-201ENST00000334409 GPKOWQ92917 476 aaPredicted RBP eCLIP18.91■□□□□ 0.62
PDCD1-201ENST00000334409 TMX2Q9Y320 296 aa18.91■□□□□ 0.62
PDCD1-201ENST00000334409 SNAP25P60880 206 aa18.91■□□□□ 0.62
PDCD1-201ENST00000334409 MDM2Q00987 491 aaPredicted RBP18.91■□□□□ 0.62
PDCD1-201ENST00000334409 FOXP1Q9H334 677 aaPredicted RBP18.91■□□□□ 0.62
PDCD1-201ENST00000334409 PICK1Q9NRD5 415 aa18.91■□□□□ 0.62
PDCD1-201ENST00000334409 PCDHA5Q9Y5H7 936 aa18.91■□□□□ 0.62
PDCD1-201ENST00000334409 SHOX2O60902 331 aaPredicted RBP18.9■□□□□ 0.62
PDCD1-201ENST00000334409 CCDC175P0C221 793 aa18.9■□□□□ 0.62
PDCD1-201ENST00000334409 GNAQP50148 359 aa18.9■□□□□ 0.62
PDCD1-201ENST00000334409 SPP2Q13103 211 aa18.9■□□□□ 0.62
PDCD1-201ENST00000334409 ASPRV1Q53RT3 343 aa18.9■□□□□ 0.62
PDCD1-201ENST00000334409 WDR93Q6P2C0 686 aa18.9■□□□□ 0.62
PDCD1-201ENST00000334409 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.9■□□□□ 0.62
PDCD1-201ENST00000334409 CNKSR2Q8WXI2 1034 aa18.9■□□□□ 0.62
PDCD1-201ENST00000334409 PIGSQ96S52 555 aa18.9■□□□□ 0.62
PDCD1-201ENST00000334409 ZHX2Q9Y6X8 837 aa18.9■□□□□ 0.62
PDCD1-201ENST00000334409 PPP1R12BO60237 982 aaPredicted RBP18.89■□□□□ 0.62
PDCD1-201ENST00000334409 N4BP1O75113 896 aaKnown RBP18.89■□□□□ 0.62
PDCD1-201ENST00000334409 PTPRAP18433 802 aa18.89■□□□□ 0.62
PDCD1-201ENST00000334409 PTPREP23469 700 aa18.89■□□□□ 0.62
PDCD1-201ENST00000334409 WHAMMP3Q1A5X7 153 aa18.89■□□□□ 0.62
PDCD1-201ENST00000334409 RILPL1Q5EBL4 403 aa18.89■□□□□ 0.62
PDCD1-201ENST00000334409 FAM83BQ5T0W9 1011 aa18.89■□□□□ 0.62
PDCD1-201ENST00000334409 NT5DC1Q5TFE4 455 aa18.89■□□□□ 0.62
PDCD1-201ENST00000334409 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.89■□□□□ 0.62
PDCD1-201ENST00000334409 ZNF579Q8NAF0 562 aaKnown RBP18.89■□□□□ 0.62
PDCD1-201ENST00000334409 GMCL1P1Q8NEA9 526 aa18.89■□□□□ 0.62
PDCD1-201ENST00000334409 TRIM75PA6NK02 468 aa18.89■□□□□ 0.61
PDCD1-201ENST00000334409 TMEM232C9JQI7 657 aa18.89■□□□□ 0.61
PDCD1-201ENST00000334409 KIF5CO60282 957 aa18.89■□□□□ 0.61
PDCD1-201ENST00000334409 CALRP27797 417 aaKnown RBP18.89■□□□□ 0.61
PDCD1-201ENST00000334409 HNRNPH1P31943 449 aaKnown RBP18.89■□□□□ 0.61
PDCD1-201ENST00000334409 IKQ13123 557 aaPredicted RBP18.89■□□□□ 0.61
PDCD1-201ENST00000334409 MTMR2Q13614 643 aa18.89■□□□□ 0.61
PDCD1-201ENST00000334409 VGLL4Q14135 290 aa18.89■□□□□ 0.61
PDCD1-201ENST00000334409 MAP9Q49MG5 647 aa18.89■□□□□ 0.61
PDCD1-201ENST00000334409 ADGRF4Q8IZF3 695 aa18.89■□□□□ 0.61
PDCD1-201ENST00000334409 USP17L10C9JJH3 530 aa18.88■□□□□ 0.61
PDCD1-201ENST00000334409 EBAG9O00559 213 aa18.88■□□□□ 0.61
PDCD1-201ENST00000334409 DCAF4Q8WV16 495 aa18.88■□□□□ 0.61
PDCD1-201ENST00000334409 CLMNQ96JQ2 1002 aa18.88■□□□□ 0.61
PDCD1-201ENST00000334409 PNKPQ96T60 521 aa18.88■□□□□ 0.61
PDCD1-201ENST00000334409 NAA15Q9BXJ9 866 aaKnown RBP18.88■□□□□ 0.61
PDCD1-201ENST00000334409 GOPCQ9HD26 462 aa18.88■□□□□ 0.61
PDCD1-201ENST00000334409 DACH1Q9UI36 760 aa18.88■□□□□ 0.61
PDCD1-201ENST00000334409 FBXO2Q9UK22 296 aaPredicted RBP18.88■□□□□ 0.61
PDCD1-201ENST00000334409 RNF40O75150 1001 aa18.88■□□□□ 0.61
PDCD1-201ENST00000334409 PRR29P0C7W0 189 aa18.88■□□□□ 0.61
PDCD1-201ENST00000334409 BMP3P12645 472 aa18.88■□□□□ 0.61
PDCD1-201ENST00000334409 NF2P35240 595 aa18.88■□□□□ 0.61
PDCD1-201ENST00000334409 TOB1P50616 345 aaPredicted RBP18.88■□□□□ 0.61
PDCD1-201ENST00000334409 DIS3L2Q8IYB7 885 aaKnown RBP18.88■□□□□ 0.61
PDCD1-201ENST00000334409 CNPY4Q8N129 248 aa18.88■□□□□ 0.61
PDCD1-201ENST00000334409 VCPKMTQ9H867 229 aa18.88■□□□□ 0.61
PDCD1-201ENST00000334409 FANCLQ9NW38 375 aa18.88■□□□□ 0.61
PDCD1-201ENST00000334409 BTBD18B2RXH4 712 aa18.87■□□□□ 0.61
PDCD1-201ENST00000334409 SCG2P13521 617 aa18.87■□□□□ 0.61
PDCD1-201ENST00000334409 DOCK1Q14185 1865 aa18.87■□□□□ 0.61
PDCD1-201ENST00000334409 POSTNQ15063 836 aa18.87■□□□□ 0.61
PDCD1-201ENST00000334409 HEATR3Q7Z4Q2 680 aa18.87■□□□□ 0.61
PDCD1-201ENST00000334409 TRIML1Q8N9V2 468 aa18.87■□□□□ 0.61
PDCD1-201ENST00000334409 MLKLQ8NB16 471 aa18.87■□□□□ 0.61
PDCD1-201ENST00000334409 LZTS2Q9BRK4 669 aa18.87■□□□□ 0.61
PDCD1-201ENST00000334409 MAN1B1Q9UKM7 699 aa18.87■□□□□ 0.61
PDCD1-201ENST00000334409 A6NNZ2 444 aa18.86■□□□□ 0.61
PDCD1-201ENST00000334409 ADAMTS3O15072 1205 aa18.86■□□□□ 0.61
PDCD1-201ENST00000334409 BMP6P22004 513 aa18.86■□□□□ 0.61
PDCD1-201ENST00000334409 SARSP49591 514 aaKnown RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms