RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 CDK12Q9NYV4 1490 aaPredicted RBP18.16■□□□□ 0.5
PACS1-201ENST00000320580 ZNF18P17022 549 aa18.16■□□□□ 0.5
PACS1-201ENST00000320580 KLC1Q07866 573 aa18.16■□□□□ 0.5
PACS1-201ENST00000320580 ADCY2Q08462 1091 aa18.16■□□□□ 0.5
PACS1-201ENST00000320580 CFAP157Q5JU67 520 aa18.16■□□□□ 0.5
PACS1-201ENST00000320580 PROCA1Q8NCQ7 364 aaPredicted RBP18.16■□□□□ 0.5
PACS1-201ENST00000320580 RUBCNQ92622 972 aa18.16■□□□□ 0.5
PACS1-201ENST00000320580 XPO6Q96QU8 1125 aaKnown RBP18.16■□□□□ 0.5
PACS1-201ENST00000320580 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.16■□□□□ 0.5
PACS1-201ENST00000320580 SEC63Q9UGP8 760 aaKnown RBP18.16■□□□□ 0.5
PACS1-201ENST00000320580 LIMA1Q9UHB6 759 aaKnown RBP18.16■□□□□ 0.5
PACS1-201ENST00000320580 CAPN11Q9UMQ6 739 aa18.16■□□□□ 0.5
PACS1-201ENST00000320580 DAAM1Q9Y4D1 1078 aa18.16■□□□□ 0.5
PACS1-201ENST00000320580 A0A0G2JLW4 131 aa18.15■□□□□ 0.5
PACS1-201ENST00000320580 DCAF17Q5H9S7 520 aaPredicted RBP18.15■□□□□ 0.5
PACS1-201ENST00000320580 B4GALNT2Q8NHY0 566 aa18.15■□□□□ 0.5
PACS1-201ENST00000320580 RAPGEF5Q92565 580 aa18.15■□□□□ 0.5
PACS1-201ENST00000320580 DLGAP2Q9P1A6 1054 aa18.15■□□□□ 0.5
PACS1-201ENST00000320580 IQSEC3Q9UPP2 1182 aaPredicted RBP18.15■□□□□ 0.5
PACS1-201ENST00000320580 IGF2BP3O00425 579 aaKnown RBP eCLIP18.15■□□□□ 0.52e-6■□□□□ 8.2
PACS1-201ENST00000320580 COG7P83436 770 aa18.15■□□□□ 0.5
PACS1-201ENST00000320580 LETM2Q2VYF4 491 aa18.15■□□□□ 0.5
PACS1-201ENST00000320580 TMED1Q13445 227 aa18.15■□□□□ 0.5
PACS1-201ENST00000320580 LRRC14Q15048 493 aa18.15■□□□□ 0.5
PACS1-201ENST00000320580 SEL1L2Q5TEA6 688 aa18.15■□□□□ 0.5
PACS1-201ENST00000320580 MAEAQ7L5Y9 396 aa18.15■□□□□ 0.5
PACS1-201ENST00000320580 AENQ8WTP8 325 aaKnown RBP18.15■□□□□ 0.5
PACS1-201ENST00000320580 NUDCD1Q96RS6 583 aa18.15■□□□□ 0.5
PACS1-201ENST00000320580 ZMYND12Q9H0C1 365 aa18.15■□□□□ 0.5
PACS1-201ENST00000320580 CHCHD3Q9NX63 227 aaKnown RBP18.15■□□□□ 0.5
PACS1-201ENST00000320580 LMTK3Q96Q04 1460 aa18.15■□□□□ 0.5
PACS1-201ENST00000320580 SH2B2O14492 632 aaPredicted RBP18.14■□□□□ 0.5
PACS1-201ENST00000320580 FERP16591 822 aa18.14■□□□□ 0.5
PACS1-201ENST00000320580 SEMA3FQ13275 785 aa18.14■□□□□ 0.5
PACS1-201ENST00000320580 CCDC62Q6P9F0 684 aa18.14■□□□□ 0.5
PACS1-201ENST00000320580 TMED8Q6PL24 325 aaPredicted RBP18.14■□□□□ 0.5
PACS1-201ENST00000320580 YTHDF3Q7Z739 585 aaKnown RBP18.14■□□□□ 0.5
PACS1-201ENST00000320580 PHLDB2Q86SQ0 1253 aa18.14■□□□□ 0.5
PACS1-201ENST00000320580 SCYL3Q8IZE3 742 aa18.14■□□□□ 0.5
PACS1-201ENST00000320580 P2RX5Q93086 422 aa18.14■□□□□ 0.5
PACS1-201ENST00000320580 UQCRFS1P1P0C7P4 283 aa18.14■□□□□ 0.49
PACS1-201ENST00000320580 SLC5A1P13866 664 aa18.14■□□□□ 0.49
PACS1-201ENST00000320580 DESP17661 470 aa18.14■□□□□ 0.49
PACS1-201ENST00000320580 HHATQ5VTY9 493 aa18.14■□□□□ 0.49
PACS1-201ENST00000320580 DZIP3Q86Y13 1208 aaKnown RBP18.14■□□□□ 0.49
PACS1-201ENST00000320580 SYCE1Q8N0S2 351 aa18.14■□□□□ 0.49
PACS1-201ENST00000320580 ZNF579Q8NAF0 562 aaKnown RBP18.14■□□□□ 0.49
PACS1-201ENST00000320580 LRRC27Q9C0I9 530 aa18.14■□□□□ 0.49
PACS1-201ENST00000320580 PNMA2Q9UL42 364 aa18.14■□□□□ 0.49
PACS1-201ENST00000320580 HPSEQ9Y251 543 aa18.14■□□□□ 0.49
PACS1-201ENST00000320580 RASGRF2O14827 1237 aa18.14■□□□□ 0.49
PACS1-201ENST00000320580 CYP7A1P22680 504 aa18.14■□□□□ 0.49
PACS1-201ENST00000320580 THAP9Q9H5L6 903 aa18.14■□□□□ 0.49
PACS1-201ENST00000320580 MKNK2Q9HBH9 465 aa18.14■□□□□ 0.49
PACS1-201ENST00000320580 FBXO2Q9UK22 296 aaPredicted RBP18.14■□□□□ 0.49
PACS1-201ENST00000320580 ZNF532Q9HCE3 1301 aa18.14■□□□□ 0.49
PACS1-201ENST00000320580 SETD1BQ9UPS6 1966 aaKnown RBP18.14■□□□□ 0.49
PACS1-201ENST00000320580 IFNAR1P17181 557 aa18.14■□□□□ 0.49
PACS1-201ENST00000320580 SH3BGRP55822 239 aaPredicted RBP18.14■□□□□ 0.49
PACS1-201ENST00000320580 GFPT1Q06210 699 aaPredicted RBP18.14■□□□□ 0.49
PACS1-201ENST00000320580 AKNAD1Q5T1N1 836 aa18.14■□□□□ 0.49
PACS1-201ENST00000320580 HELBQ8NG08 1087 aaPredicted RBP18.14■□□□□ 0.49
PACS1-201ENST00000320580 LBHD1Q9BQE6 289 aaPredicted RBP18.14■□□□□ 0.49
PACS1-201ENST00000320580 PLVAPQ9BX97 442 aa18.14■□□□□ 0.49
PACS1-201ENST00000320580 CTTNBP2NLQ9P2B4 639 aa18.14■□□□□ 0.49
PACS1-201ENST00000320580 C21orf2O43822 256 aa18.13■□□□□ 0.49
PACS1-201ENST00000320580 IGHMBP2P38935 993 aaKnown RBP18.13■□□□□ 0.49
PACS1-201ENST00000320580 CETN2P41208 172 aa18.13■□□□□ 0.49
PACS1-201ENST00000320580 PTPN12Q05209 780 aaKnown RBP18.13■□□□□ 0.49
PACS1-201ENST00000320580 LRRC24Q50LG9 513 aa18.13■□□□□ 0.49
PACS1-201ENST00000320580 DDX42Q86XP3 938 aaKnown RBP eCLIP18.13■□□□□ 0.49
PACS1-201ENST00000320580 FBXO41Q8TF61 875 aa18.13■□□□□ 0.49
PACS1-201ENST00000320580 INTUQ9ULD6 942 aa18.13■□□□□ 0.49
PACS1-201ENST00000320580 CHN1P15882 459 aa18.13■□□□□ 0.49
PACS1-201ENST00000320580 ABCB4P21439 1286 aa18.13■□□□□ 0.49
PACS1-201ENST00000320580 CALM1P0DP23 149 aa18.13■□□□□ 0.49
PACS1-201ENST00000320580 CALM2P0DP24 149 aa18.13■□□□□ 0.49
PACS1-201ENST00000320580 CALM3P0DP25 149 aa18.13■□□□□ 0.49
PACS1-201ENST00000320580 SEPT6Q14141 434 aa18.13■□□□□ 0.49
PACS1-201ENST00000320580 ANKRD20A3Q5VUR7 823 aa18.13■□□□□ 0.49
PACS1-201ENST00000320580 CABP7Q86V35 215 aa18.13■□□□□ 0.49
PACS1-201ENST00000320580 AZI2Q9H6S1 392 aa18.13■□□□□ 0.49
PACS1-201ENST00000320580 ADAMTS1Q9UHI8 967 aa18.13■□□□□ 0.49
PACS1-201ENST00000320580 DAPK3O43293 454 aa18.12■□□□□ 0.49
PACS1-201ENST00000320580 KRT15P19012 456 aa18.12■□□□□ 0.49
PACS1-201ENST00000320580 ARHGAP24Q8N264 748 aa18.12■□□□□ 0.49
PACS1-201ENST00000320580 OXER1Q8TDS5 423 aa18.12■□□□□ 0.49
PACS1-201ENST00000320580 U2AF1L4Q8WU68 220 aaKnown RBP18.12■□□□□ 0.49
PACS1-201ENST00000320580 DYDC2Q96IM9 177 aa18.12■□□□□ 0.49
PACS1-201ENST00000320580 PUS7LQ9H0K6 701 aaKnown RBP18.12■□□□□ 0.49
PACS1-201ENST00000320580 FBXO3Q9UK99 471 aa18.12■□□□□ 0.49
PACS1-201ENST00000320580 MRPS35P82673 323 aaKnown RBP18.12■□□□□ 0.49
PACS1-201ENST00000320580 ACCSLQ4AC99 568 aa18.12■□□□□ 0.49
PACS1-201ENST00000320580 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.12■□□□□ 0.49
PACS1-201ENST00000320580 FAM47EQ6ZV65 393 aa18.12■□□□□ 0.49
PACS1-201ENST00000320580 NELFCDQ8IXH7 590 aa18.12■□□□□ 0.49
PACS1-201ENST00000320580 RAB3IL1Q8TBN0 382 aa18.12■□□□□ 0.49
PACS1-201ENST00000320580 SHOX2O60902 331 aaPredicted RBP18.12■□□□□ 0.49
PACS1-201ENST00000320580 TMC4Q7Z404 712 aa18.12■□□□□ 0.49
PACS1-201ENST00000320580 LRRC8CQ8TDW0 803 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms