RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 OVOS2A0A0J9YW53 1432 aa20.71■□□□□ 0.91
PTPRE-201ENST00000254667 TNS3Q68CZ2 1445 aa20.71■□□□□ 0.91
PTPRE-201ENST00000254667 OVOS2Q6IE36 1432 aa20.71■□□□□ 0.91
PTPRE-201ENST00000254667 KCNQ4P56696 695 aa20.71■□□□□ 0.91
PTPRE-201ENST00000254667 IGBP1P78318 339 aa20.71■□□□□ 0.91
PTPRE-201ENST00000254667 CDC37Q16543 378 aaPredicted RBP20.71■□□□□ 0.91
PTPRE-201ENST00000254667 FAM182BQ5T319 152 aa20.71■□□□□ 0.91
PTPRE-201ENST00000254667 RWDD2AQ9UIY3 292 aa20.71■□□□□ 0.91
PTPRE-201ENST00000254667 IGKV5-2P06315 115 aa20.71■□□□□ 0.91
PTPRE-201ENST00000254667 MMP10P09238 476 aa20.71■□□□□ 0.91
PTPRE-201ENST00000254667 MAN1A1P33908 653 aa20.71■□□□□ 0.91
PTPRE-201ENST00000254667 IREB2P48200 963 aaKnown RBP20.71■□□□□ 0.91
PTPRE-201ENST00000254667 ARHGAP25P42331 645 aa20.7■□□□□ 0.9
PTPRE-201ENST00000254667 DCAF4Q8WV16 495 aa20.7■□□□□ 0.9
PTPRE-201ENST00000254667 COA7Q96BR5 231 aa20.7■□□□□ 0.9
PTPRE-201ENST00000254667 WDR19Q8NEZ3 1342 aa20.7■□□□□ 0.9
PTPRE-201ENST00000254667 CLTCL1P53675 1640 aa20.7■□□□□ 0.9
PTPRE-201ENST00000254667 NR5A1Q13285 461 aa20.7■□□□□ 0.9
PTPRE-201ENST00000254667 HLFQ16534 295 aa20.7■□□□□ 0.9
PTPRE-201ENST00000254667 NBPF3Q9H094 633 aa20.7■□□□□ 0.9
PTPRE-201ENST00000254667 PFDN4Q9NQP4 134 aa20.7■□□□□ 0.9
PTPRE-201ENST00000254667 CASP14P31944 242 aa20.7■□□□□ 0.9
PTPRE-201ENST00000254667 CABS1Q96KC9 395 aa20.7■□□□□ 0.9
PTPRE-201ENST00000254667 CEP170P1Q96L14 293 aa20.7■□□□□ 0.9
PTPRE-201ENST00000254667 AP3B2Q13367 1082 aa20.7■□□□□ 0.9
PTPRE-201ENST00000254667 ENOX1Q8TC92 643 aaKnown RBP20.7■□□□□ 0.9
PTPRE-201ENST00000254667 HOMER3Q9NSC5 361 aa20.7■□□□□ 0.9
PTPRE-201ENST00000254667 LMNB2Q03252 620 aa20.69■□□□□ 0.9
PTPRE-201ENST00000254667 RESTQ13127 1097 aa20.69■□□□□ 0.9
PTPRE-201ENST00000254667 RCAN1P53805 252 aa20.69■□□□□ 0.9
PTPRE-201ENST00000254667 UBXN2AP68543 259 aa20.69■□□□□ 0.9
PTPRE-201ENST00000254667 SDCCAG8Q86SQ7 713 aaPredicted RBP20.69■□□□□ 0.9
PTPRE-201ENST00000254667 NOL3O60936 208 aaKnown RBP20.69■□□□□ 0.9
PTPRE-201ENST00000254667 CTAGE3PQ8IX95 158 aa20.69■□□□□ 0.9
PTPRE-201ENST00000254667 CACTINQ8WUQ7 758 aaKnown RBP20.69■□□□□ 0.9
PTPRE-201ENST00000254667 MAN1B1Q9UKM7 699 aa20.69■□□□□ 0.9
PTPRE-201ENST00000254667 COL15A1P39059 1388 aa20.69■□□□□ 0.9
PTPRE-201ENST00000254667 ALKQ9UM73 1620 aa20.69■□□□□ 0.9
PTPRE-201ENST00000254667 EIF3CLB5ME19 914 aaKnown RBP20.69■□□□□ 0.9
PTPRE-201ENST00000254667 RNF40O75150 1001 aa20.69■□□□□ 0.9
PTPRE-201ENST00000254667 CEP85LQ5SZL2 805 aa20.69■□□□□ 0.9
PTPRE-201ENST00000254667 GKAP1Q5VSY0 366 aaPredicted RBP20.69■□□□□ 0.9
PTPRE-201ENST00000254667 RINT1Q6NUQ1 792 aa20.69■□□□□ 0.9
PTPRE-201ENST00000254667 EIF3CQ99613 913 aaKnown RBP20.69■□□□□ 0.9
PTPRE-201ENST00000254667 ANO3Q9BYT9 981 aa20.69■□□□□ 0.9
PTPRE-201ENST00000254667 GLI2P10070 1586 aa20.69■□□□□ 0.9
PTPRE-201ENST00000254667 TULP4Q9NRJ4 1543 aa20.69■□□□□ 0.9
PTPRE-201ENST00000254667 MYO1FO00160 1098 aa20.68■□□□□ 0.9
PTPRE-201ENST00000254667 ASNSP08243 561 aa20.68■□□□□ 0.9
PTPRE-201ENST00000254667 THAP9Q9H5L6 903 aa20.68■□□□□ 0.9
PTPRE-201ENST00000254667 THAP12O43422 761 aa20.68■□□□□ 0.9
PTPRE-201ENST00000254667 PSAPP07602 524 aa20.68■□□□□ 0.9
PTPRE-201ENST00000254667 BFSP1Q12934 665 aa20.68■□□□□ 0.9
PTPRE-201ENST00000254667 CFAP57Q96MR6 1250 aa20.68■□□□□ 0.9
PTPRE-201ENST00000254667 RIPOR2Q9Y4F9 1068 aa20.68■□□□□ 0.9
PTPRE-201ENST00000254667 CCNE1P24864 410 aa20.68■□□□□ 0.9
PTPRE-201ENST00000254667 MCUR1Q96AQ8 359 aa20.68■□□□□ 0.9
PTPRE-201ENST00000254667 PCDHB4Q9Y5E5 795 aa20.68■□□□□ 0.9
PTPRE-201ENST00000254667 USP31Q70CQ4 1352 aa20.68■□□□□ 0.9
PTPRE-201ENST00000254667 PASKQ96RG2 1323 aa20.68■□□□□ 0.9
PTPRE-201ENST00000254667 OAS2P29728 719 aaKnown RBP20.68■□□□□ 0.9
PTPRE-201ENST00000254667 DPCR1Q3MIW9 517 aa20.68■□□□□ 0.9
PTPRE-201ENST00000254667 SEPT14Q6ZU15 432 aa20.68■□□□□ 0.9
PTPRE-201ENST00000254667 AKT3Q9Y243 479 aa20.68■□□□□ 0.9
PTPRE-201ENST00000254667 PARVGQ9HBI0 331 aa20.68■□□□□ 0.9
PTPRE-201ENST00000254667 TRPM1Q7Z4N2 1603 aa20.67■□□□□ 0.9
PTPRE-201ENST00000254667 GOLGA8KD6RF30 607 aa20.67■□□□□ 0.9
PTPRE-201ENST00000254667 APBA1Q02410 837 aa20.67■□□□□ 0.9
PTPRE-201ENST00000254667 CACNA2D3Q8IZS8 1091 aa20.67■□□□□ 0.9
PTPRE-201ENST00000254667 CCDC160A6NGH7 325 aa20.67■□□□□ 0.9
PTPRE-201ENST00000254667 INO80B-WBP1J3KQ70 363 aa20.67■□□□□ 0.9
PTPRE-201ENST00000254667 INPP5BP32019 993 aa20.67■□□□□ 0.9
PTPRE-201ENST00000254667 INO80BQ9C086 356 aaPredicted RBP20.67■□□□□ 0.9
PTPRE-201ENST00000254667 STK36Q9NRP7 1315 aa20.67■□□□□ 0.9
PTPRE-201ENST00000254667 RNF17Q9BXT8 1623 aaKnown RBP20.67■□□□□ 0.9
PTPRE-201ENST00000254667 MAP7Q14244 749 aa20.67■□□□□ 0.9
PTPRE-201ENST00000254667 BSPRYQ5W0U4 402 aa20.67■□□□□ 0.9
PTPRE-201ENST00000254667 PPP4R3CPQ6ZMV5 832 aa20.67■□□□□ 0.9
PTPRE-201ENST00000254667 NUB1Q9Y5A7 615 aa20.67■□□□□ 0.9
PTPRE-201ENST00000254667 UNC13BO14795 1591 aa20.67■□□□□ 0.9
PTPRE-201ENST00000254667 CYP2D7A0A087X1C5 515 aa20.67■□□□□ 0.9
PTPRE-201ENST00000254667 STX2P32856 288 aa20.67■□□□□ 0.9
PTPRE-201ENST00000254667 PGBD1Q96JS3 809 aa20.67■□□□□ 0.9
PTPRE-201ENST00000254667 PFDN6O15212 129 aa20.66■□□□□ 0.9
PTPRE-201ENST00000254667 ATF2P15336 505 aa20.66■□□□□ 0.9
PTPRE-201ENST00000254667 ZNF131P52739 623 aa20.66■□□□□ 0.9
PTPRE-201ENST00000254667 SURF1Q15526 300 aa20.66■□□□□ 0.9
PTPRE-201ENST00000254667 ANKRD20A3Q5VUR7 823 aa20.66■□□□□ 0.9
PTPRE-201ENST00000254667 TMTC3Q6ZXV5 915 aa20.66■□□□□ 0.9
PTPRE-201ENST00000254667 PODNQ7Z5L7 613 aa20.66■□□□□ 0.9
PTPRE-201ENST00000254667 MINPP1Q9UNW1 487 aa20.66■□□□□ 0.9
PTPRE-201ENST00000254667 OATP04181 439 aa20.66■□□□□ 0.9
PTPRE-201ENST00000254667 PTPREP23469 700 aa20.66■□□□□ 0.9
PTPRE-201ENST00000254667 RSRC1Q96IZ7 334 aaKnown RBP20.66■□□□□ 0.9
PTPRE-201ENST00000254667 DISC1Q9NRI5 854 aa20.66■□□□□ 0.9
PTPRE-201ENST00000254667 EMILIN3Q9NT22 766 aa20.66■□□□□ 0.9
PTPRE-201ENST00000254667 ZNF215Q9UL58 517 aaPredicted RBP20.66■□□□□ 0.9
PTPRE-201ENST00000254667 ZBTB24O43167 697 aaPredicted RBP20.66■□□□□ 0.9
PTPRE-201ENST00000254667 PLA2G4BP0C869 781 aa20.66■□□□□ 0.9
PTPRE-201ENST00000254667 TROVE2P10155 538 aaKnown RBP eCLIP20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms