RNA–Protein interactions for RNA: ENST00000254667.7
PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, human
Retrieved 4 of 4 RNA–protein pairs in 2.9 ms
PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, human
APPRIS P1 TSL 1 (best) BASIC
Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .
RNA | Protein | Prediction (catRAPID) | Interaction (ENCODE eCLIP) | ||||||
---|---|---|---|---|---|---|---|---|---|
Transcript Symbol | Ensembl Transcript ID | Gene | UniProt Accession | Length | Protein Status | Prediction Score | Prediction z-Score | p-Value | Fold Change |
PTPRE-201 | ENST00000254667 | WRN | Q14191 | 1432 aa | Predicted RBP eCLIP | 25.67 | ■■□□□ 1.7 | 3e-13 | ■■■■■ 117 |
PTPRE-201 | ENST00000254667 | UTP3 | Q9NQZ2 | 479 aa | Known RBP eCLIP | 22.25 | ■■□□□ 1.15 | 3e-10 | ■■■■■ 153.8 |
PTPRE-201 | ENST00000254667 | DGCR8 | Q8WYQ5 | 773 aa | Known RBP eCLIP | 20.1 | ■□□□□ 0.81 | 1e-6 | ■■■■■ 56.1 |
PTPRE-201 | ENST00000254667 | PUS1 | Q9Y606 | 427 aa | Known RBP eCLIP | 17.1 | ■□□□□ 0.33 | 2e-6 | ■■■■■ 28.9 |