RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.25■■□□□ 1.153e-10■■■■■ 153.8
PTPRE-201ENST00000254667 WRNQ14191 1432 aaPredicted RBP eCLIP25.67■■□□□ 1.73e-13■■■■■ 117
PTPRE-201ENST00000254667 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.1■□□□□ 0.811e-6■■■■■ 56.1
PTPRE-201ENST00000254667 PUS1Q9Y606 427 aaKnown RBP eCLIP17.1■□□□□ 0.332e-6■■■■■ 28.9
Retrieved 4 of 4 RNA–protein pairs in 27.9 ms