RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 SESN3P58005 492 aa12.06□□□□□ -0.48
KNOP1-201ENST00000219837 FAM182BQ5T319 152 aa12.06□□□□□ -0.48
KNOP1-201ENST00000219837 OR8K1Q8NGG5 319 aa12.06□□□□□ -0.48
KNOP1-201ENST00000219837 ZNF233A6NK53 670 aa12.06□□□□□ -0.48
KNOP1-201ENST00000219837 SEMA3EO15041 775 aa12.06□□□□□ -0.48
KNOP1-201ENST00000219837 FGAP02671 866 aa12.06□□□□□ -0.48
KNOP1-201ENST00000219837 AFPP02771 609 aaKnown RBP12.06□□□□□ -0.48
KNOP1-201ENST00000219837 PSAPP07602 524 aa12.06□□□□□ -0.48
KNOP1-201ENST00000219837 INHBAP08476 426 aa12.06□□□□□ -0.48
KNOP1-201ENST00000219837 GNGT1P63211 74 aa12.06□□□□□ -0.48
KNOP1-201ENST00000219837 SCRN1Q12765 414 aa12.06□□□□□ -0.48
KNOP1-201ENST00000219837 SPDYE1Q8NFV5 336 aaPredicted RBP12.06□□□□□ -0.48
KNOP1-201ENST00000219837 RNF217Q8TC41 542 aa12.06□□□□□ -0.48
KNOP1-201ENST00000219837 RASGRP4Q8TDF6 673 aa12.06□□□□□ -0.48
KNOP1-201ENST00000219837 DEPDC1BQ8WUY9 529 aa12.06□□□□□ -0.48
KNOP1-201ENST00000219837 TACO1Q9BSH4 297 aaKnown RBP12.06□□□□□ -0.48
KNOP1-201ENST00000219837 FAM8A1Q9UBU6 413 aa12.06□□□□□ -0.48
KNOP1-201ENST00000219837 KIF1BO60333 1816 aa12.06□□□□□ -0.48
KNOP1-201ENST00000219837 GAP43P17677 238 aa12.06□□□□□ -0.48
KNOP1-201ENST00000219837 ADD1P35611 737 aaKnown RBP12.06□□□□□ -0.48
KNOP1-201ENST00000219837 DARS2Q6PI48 645 aaKnown RBP12.06□□□□□ -0.48
KNOP1-201ENST00000219837 FTOQ9C0B1 505 aaKnown RBP eCLIP12.06□□□□□ -0.48
KNOP1-201ENST00000219837 KIAA1468Q9P260 1216 aa12.06□□□□□ -0.48
KNOP1-201ENST00000219837 PSDA5PKW4 1024 aaPredicted RBP12.06□□□□□ -0.48
KNOP1-201ENST00000219837 SOX5P35711 763 aa12.06□□□□□ -0.48
KNOP1-201ENST00000219837 TFAMQ00059 246 aaKnown RBP12.06□□□□□ -0.48
KNOP1-201ENST00000219837 C7orf31Q8N865 590 aa12.06□□□□□ -0.48
KNOP1-201ENST00000219837 CEP170P1Q96L14 293 aa12.06□□□□□ -0.48
KNOP1-201ENST00000219837 HEXIM2Q96MH2 286 aaKnown RBP12.06□□□□□ -0.48
KNOP1-201ENST00000219837 PUS3Q9BZE2 481 aaKnown RBP12.06□□□□□ -0.48
KNOP1-201ENST00000219837 SLC8A2Q9UPR5 921 aa12.06□□□□□ -0.48
KNOP1-201ENST00000219837 PPP2R2CQ9Y2T4 447 aa12.06□□□□□ -0.48
KNOP1-201ENST00000219837 RIPOR2Q9Y4F9 1068 aa12.06□□□□□ -0.48
KNOP1-201ENST00000219837 KRT10P13645 584 aa12.06□□□□□ -0.48
KNOP1-201ENST00000219837 AOC3Q16853 763 aa12.06□□□□□ -0.48
KNOP1-201ENST00000219837 LRRC8CQ8TDW0 803 aa12.06□□□□□ -0.48
KNOP1-201ENST00000219837 ZBED2Q9BTP6 218 aa12.06□□□□□ -0.48
KNOP1-201ENST00000219837 VCX3AQ9NNX9 186 aa12.06□□□□□ -0.48
KNOP1-201ENST00000219837 CPSF2Q9P2I0 782 aaKnown RBP12.06□□□□□ -0.48
KNOP1-201ENST00000219837 GOLGA8SH3BPF8 625 aa12.05□□□□□ -0.48
KNOP1-201ENST00000219837 TTC4O95801 387 aa12.05□□□□□ -0.48
KNOP1-201ENST00000219837 ATP1A2P50993 1020 aa12.05□□□□□ -0.48
KNOP1-201ENST00000219837 MYO1EQ12965 1108 aa12.05□□□□□ -0.48
KNOP1-201ENST00000219837 ELMOD1Q8N336 334 aa12.05□□□□□ -0.48
KNOP1-201ENST00000219837 PIGSQ96S52 555 aa12.05□□□□□ -0.48
KNOP1-201ENST00000219837 HINFPQ9BQA5 517 aa12.05□□□□□ -0.48
KNOP1-201ENST00000219837 HACD3Q9P035 362 aa12.05□□□□□ -0.48
KNOP1-201ENST00000219837 FOSP01100 380 aaPredicted RBP12.05□□□□□ -0.48
KNOP1-201ENST00000219837 LRRC41Q15345 812 aa12.05□□□□□ -0.48
KNOP1-201ENST00000219837 ARHGEF18Q6ZSZ5 1173 aa12.05□□□□□ -0.48
KNOP1-201ENST00000219837 HSPH1Q92598 858 aa12.05□□□□□ -0.48
KNOP1-201ENST00000219837 FAM135BQ49AJ0 1406 aa12.05□□□□□ -0.48
KNOP1-201ENST00000219837 BRD3Q15059 726 aa12.05□□□□□ -0.48
KNOP1-201ENST00000219837 UBE2SQ16763 222 aa12.05□□□□□ -0.48
KNOP1-201ENST00000219837 TTC19Q6DKK2 380 aaPredicted RBP12.05□□□□□ -0.48
KNOP1-201ENST00000219837 PPP4R4Q6NUP7 873 aa12.05□□□□□ -0.48
KNOP1-201ENST00000219837 FAM196AQ6ZSG2 479 aa12.05□□□□□ -0.48
KNOP1-201ENST00000219837 KRT27Q7Z3Y8 459 aa12.05□□□□□ -0.48
KNOP1-201ENST00000219837 SLC7A3Q8WY07 619 aa12.05□□□□□ -0.48
KNOP1-201ENST00000219837 GNGT2O14610 69 aa12.05□□□□□ -0.48
KNOP1-201ENST00000219837 BNIP3LO60238 219 aa12.05□□□□□ -0.48
KNOP1-201ENST00000219837 ZNF18P17022 549 aa12.05□□□□□ -0.48
KNOP1-201ENST00000219837 KCNQ4P56696 695 aa12.05□□□□□ -0.48
KNOP1-201ENST00000219837 GDAP1Q8TB36 358 aa12.05□□□□□ -0.48
KNOP1-201ENST00000219837 FAM71BQ8TC56 605 aa12.05□□□□□ -0.48
KNOP1-201ENST00000219837 ZNF653Q96CK0 615 aa12.05□□□□□ -0.48
KNOP1-201ENST00000219837 TTC1Q99614 292 aa12.05□□□□□ -0.48
KNOP1-201ENST00000219837 JPH2Q9BR39 696 aaPredicted RBP12.05□□□□□ -0.48
KNOP1-201ENST00000219837 ASAP1Q9ULH1 1129 aa12.05□□□□□ -0.48
KNOP1-201ENST00000219837 KIAA0232Q92628 1395 aa12.05□□□□□ -0.48
KNOP1-201ENST00000219837 SMIM24O75264 130 aa12.05□□□□□ -0.48
KNOP1-201ENST00000219837 FAM26FQ5R3K3 315 aa12.05□□□□□ -0.48
KNOP1-201ENST00000219837 NACC1Q96RE7 527 aa12.05□□□□□ -0.48
KNOP1-201ENST00000219837 LARSQ9P2J5 1176 aaKnown RBP12.05□□□□□ -0.48
KNOP1-201ENST00000219837 LAD1O00515 517 aa12.04□□□□□ -0.48
KNOP1-201ENST00000219837 DSTYKQ6XUX3 929 aa12.04□□□□□ -0.48
KNOP1-201ENST00000219837 SIX6OS1Q8N1H7 587 aa12.04□□□□□ -0.48
KNOP1-201ENST00000219837 LARP4BQ92615 738 aaKnown RBP12.04□□□□□ -0.48
KNOP1-201ENST00000219837 MRPL46Q9H2W6 279 aaKnown RBP12.04□□□□□ -0.48
KNOP1-201ENST00000219837 UBE2TQ9NPD8 197 aaPredicted RBP12.04□□□□□ -0.48
KNOP1-201ENST00000219837 POLIQ9UNA4 740 aa12.04□□□□□ -0.48
KNOP1-201ENST00000219837 SRGAP2CP0DJJ0 459 aa12.04□□□□□ -0.48
KNOP1-201ENST00000219837 COPB1P53618 953 aaKnown RBP12.04□□□□□ -0.48
KNOP1-201ENST00000219837 ARHGAP4P98171 946 aa12.04□□□□□ -0.48
KNOP1-201ENST00000219837 PDE1BQ01064 536 aa12.04□□□□□ -0.48
KNOP1-201ENST00000219837 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.04□□□□□ -0.48
KNOP1-201ENST00000219837 FAM149B1Q96BN6 582 aa12.04□□□□□ -0.48
KNOP1-201ENST00000219837 COA7Q96BR5 231 aa12.04□□□□□ -0.48
KNOP1-201ENST00000219837 TRIM11Q96F44 468 aa12.04□□□□□ -0.48
KNOP1-201ENST00000219837 GBP5Q96PP8 586 aa12.04□□□□□ -0.48
KNOP1-201ENST00000219837 USH1CQ9Y6N9 552 aa12.04□□□□□ -0.48
KNOP1-201ENST00000219837 MCF2LO15068 1137 aa12.04□□□□□ -0.48
KNOP1-201ENST00000219837 BPIFB4P59827 614 aa12.04□□□□□ -0.48
KNOP1-201ENST00000219837 FOXD4Q12950 439 aaPredicted RBP12.04□□□□□ -0.48
KNOP1-201ENST00000219837 CCDC38Q502W7 563 aa12.04□□□□□ -0.48
KNOP1-201ENST00000219837 GPR101Q96P66 508 aaPredicted RBP12.04□□□□□ -0.48
KNOP1-201ENST00000219837 RPF1Q9H9Y2 349 aaKnown RBP12.04□□□□□ -0.48
KNOP1-201ENST00000219837 SEC31BQ9NQW1 1179 aa12.04□□□□□ -0.48
KNOP1-201ENST00000219837 NXF1Q9UBU9 619 aaKnown RBP12.04□□□□□ -0.48
KNOP1-201ENST00000219837 MGEA5O60502 916 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms