RNA–Protein interactions for RNA: ENSMUST00000216558.1

Ubp1-206, Transcript of Upstream-binding protein 1, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Ubp1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-206ENSMUST00000216558 Adam6bQ6IMH7 756 aa17.47■□□□□ 0.39
Ubp1-206ENSMUST00000216558 Setdb2Q8C267 713 aa17.47■□□□□ 0.39
Ubp1-206ENSMUST00000216558 Klhl30Q8C3F7 581 aa17.47■□□□□ 0.39
Ubp1-206ENSMUST00000216558 NelfbQ8C4Y3 580 aa17.47■□□□□ 0.39
Ubp1-206ENSMUST00000216558 Fam161bQ8CB59 589 aa17.47■□□□□ 0.39
Ubp1-206ENSMUST00000216558 Appl2Q8K3G9 662 aa17.47■□□□□ 0.39
Ubp1-206ENSMUST00000216558 Taf6lQ8R2K4 616 aa17.47■□□□□ 0.39
Ubp1-206ENSMUST00000216558 Coa7Q921H9 231 aa17.47■□□□□ 0.39
Ubp1-206ENSMUST00000216558 Mfap3Q922T2 349 aa17.47■□□□□ 0.39
Ubp1-206ENSMUST00000216558 MymkQ9D1N4 221 aa17.47■□□□□ 0.39
Ubp1-206ENSMUST00000216558 SetQ9EQU5 289 aaKnown RBP17.47■□□□□ 0.39
Ubp1-206ENSMUST00000216558 Prkg1P0C605 671 aa17.46■□□□□ 0.39
Ubp1-206ENSMUST00000216558 Stim1P70302 685 aa17.46■□□□□ 0.39
Ubp1-206ENSMUST00000216558 Pla2g6P97819 807 aa17.46■□□□□ 0.39
Ubp1-206ENSMUST00000216558 Foxn3Q499D0 457 aa17.46■□□□□ 0.39
Ubp1-206ENSMUST00000216558 Abhd15Q5F2F2 459 aa17.46■□□□□ 0.39
Ubp1-206ENSMUST00000216558 Tll1Q62381 1013 aa17.46■□□□□ 0.39
Ubp1-206ENSMUST00000216558 Tmem130Q6NXM3 419 aa17.46■□□□□ 0.39
Ubp1-206ENSMUST00000216558 Slc17a8Q8BFU8 601 aa17.46■□□□□ 0.39
Ubp1-206ENSMUST00000216558 Nipa1Q8BHK1 323 aa17.46■□□□□ 0.39
Ubp1-206ENSMUST00000216558 Ddx19bQ8BZY3 494 aa17.46■□□□□ 0.39
Ubp1-206ENSMUST00000216558 Lca5lQ8C0X0 741 aa17.46■□□□□ 0.39
Ubp1-206ENSMUST00000216558 CnstQ8CBC4 711 aa17.46■□□□□ 0.39
Ubp1-206ENSMUST00000216558 Ddah1Q9CWS0 285 aa17.46■□□□□ 0.39
Ubp1-206ENSMUST00000216558 Thap2Q9D305 217 aa17.46■□□□□ 0.39
Ubp1-206ENSMUST00000216558 MtrA6H5Y3 1253 aa17.45■□□□□ 0.38
Ubp1-206ENSMUST00000216558 Akap2O54931 893 aa17.45■□□□□ 0.38
Ubp1-206ENSMUST00000216558 Parp2O88554 559 aa17.45■□□□□ 0.38
Ubp1-206ENSMUST00000216558 Hoxc13P50207 328 aa17.45■□□□□ 0.38
Ubp1-206ENSMUST00000216558 Nucb2P81117 420 aa17.45■□□□□ 0.38
Ubp1-206ENSMUST00000216558 Ssrp1Q08943 708 aaKnown RBP17.45■□□□□ 0.38
Ubp1-206ENSMUST00000216558 Acot10Q32MW3 439 aa17.45■□□□□ 0.38
Ubp1-206ENSMUST00000216558 Fdxacb1Q3UY23 622 aa17.45■□□□□ 0.38
Ubp1-206ENSMUST00000216558 Znf652Q5DU09 608 aa17.45■□□□□ 0.38
Ubp1-206ENSMUST00000216558 Ppp2r5cQ60996 524 aa17.45■□□□□ 0.38
Ubp1-206ENSMUST00000216558 Grik5Q61626 979 aa17.45■□□□□ 0.38
Ubp1-206ENSMUST00000216558 Lrrc8aQ80WG5 810 aa17.45■□□□□ 0.38
Ubp1-206ENSMUST00000216558 Igdcc3Q8BQC3 813 aa17.45■□□□□ 0.38
Ubp1-206ENSMUST00000216558 HlcsQ920N2 722 aa17.45■□□□□ 0.38
Ubp1-206ENSMUST00000216558 Tor1aip1Q921T2 595 aaKnown RBP17.45■□□□□ 0.38
Ubp1-206ENSMUST00000216558 Igf2bp3Q9CPN8 579 aaKnown RBP17.45■□□□□ 0.38
Ubp1-206ENSMUST00000216558 Npm3Q9CPP0 175 aaKnown RBP17.45■□□□□ 0.38
Ubp1-206ENSMUST00000216558 Rhobtb3Q9CTN4 611 aa17.45■□□□□ 0.38
Ubp1-206ENSMUST00000216558 Ush1cQ9ES64 910 aa17.45■□□□□ 0.38
Ubp1-206ENSMUST00000216558 Itga2bQ9QUM0 1033 aa17.45■□□□□ 0.38
Ubp1-206ENSMUST00000216558 Abhd2Q9QXM0 425 aa17.45■□□□□ 0.38
Ubp1-206ENSMUST00000216558 Becn1O88597 448 aa17.44■□□□□ 0.38
Ubp1-206ENSMUST00000216558 GpiP06745 558 aaKnown RBP17.44■□□□□ 0.38
Ubp1-206ENSMUST00000216558 Hoxc10P31257 342 aa17.44■□□□□ 0.38
Ubp1-206ENSMUST00000216558 Rps6P62754 249 aaKnown RBP17.44■□□□□ 0.38
Ubp1-206ENSMUST00000216558 Gtpbp6Q3U6U5 514 aa17.44■□□□□ 0.38
Ubp1-206ENSMUST00000216558 Kdm1aQ6ZQ88 853 aa17.44■□□□□ 0.38
Ubp1-206ENSMUST00000216558 Ireb2Q811J3 963 aaKnown RBP17.44■□□□□ 0.38
Ubp1-206ENSMUST00000216558 Psmd2Q8VDM4 908 aa17.44■□□□□ 0.38
Ubp1-206ENSMUST00000216558 Txndc5Q91W90 417 aa17.44■□□□□ 0.38
Ubp1-206ENSMUST00000216558 Ubxn2aQ99KJ0 258 aa17.44■□□□□ 0.38
Ubp1-206ENSMUST00000216558 Fsip1Q9D3V5 435 aa17.44■□□□□ 0.38
Ubp1-206ENSMUST00000216558 Tacc2Q9JJG0 1149 aa17.44■□□□□ 0.38
Ubp1-206ENSMUST00000216558 Cntnap5cQ0V8T7 1305 aa17.44■□□□□ 0.38
Ubp1-206ENSMUST00000216558 Plcg1Q62077 1302 aa17.44■□□□□ 0.38
Ubp1-206ENSMUST00000216558 Ugt1a6bK9J7B2 531 aa17.43■□□□□ 0.38
Ubp1-206ENSMUST00000216558 Itgb5O70309 798 aa17.43■□□□□ 0.38
Ubp1-206ENSMUST00000216558 FlgP11088 336 aa17.43■□□□□ 0.38
Ubp1-206ENSMUST00000216558 Cdk4P30285 303 aa17.43■□□□□ 0.38
Ubp1-206ENSMUST00000216558 Cst8P32766 142 aa17.43■□□□□ 0.38
Ubp1-206ENSMUST00000216558 PpardP35396 440 aa17.43■□□□□ 0.38
Ubp1-206ENSMUST00000216558 Fam83hQ148V8 1209 aa17.43■□□□□ 0.38
Ubp1-206ENSMUST00000216558 Slc2a13Q3UHK1 637 aa17.43■□□□□ 0.38
Ubp1-206ENSMUST00000216558 4933427I04RikQ3V053 235 aa17.43■□□□□ 0.38
Ubp1-206ENSMUST00000216558 Ccdc84Q4VA36 332 aaKnown RBP17.43■□□□□ 0.38
Ubp1-206ENSMUST00000216558 Ugt1a6Q64435 531 aa17.43■□□□□ 0.38
Ubp1-206ENSMUST00000216558 Dync1li2Q6PDL0 492 aaKnown RBP17.43■□□□□ 0.38
Ubp1-206ENSMUST00000216558 Ugt1a7cQ6ZQM8 531 aa17.43■□□□□ 0.38
Ubp1-206ENSMUST00000216558 Tmc3Q7TQ69 1130 aa17.43■□□□□ 0.38
Ubp1-206ENSMUST00000216558 Supt20hQ7TT00 530 aaKnown RBP17.43■□□□□ 0.38
Ubp1-206ENSMUST00000216558 Ercc6lQ8BHK9 1240 aa17.43■□□□□ 0.38
Ubp1-206ENSMUST00000216558 Serpinb13Q8CDC0 389 aa17.43■□□□□ 0.38
Ubp1-206ENSMUST00000216558 Rab3il1Q8VDV3 383 aa17.43■□□□□ 0.38
Ubp1-206ENSMUST00000216558 Rassf3Q99P51 232 aa17.43■□□□□ 0.38
Ubp1-206ENSMUST00000216558 Dnajc25A2ALW5 357 aa17.43■□□□□ 0.38
Ubp1-206ENSMUST00000216558 Ddx23D3Z0M9 819 aaKnown RBP17.43■□□□□ 0.38
Ubp1-206ENSMUST00000216558 ArP19091 899 aa17.43■□□□□ 0.38
Ubp1-206ENSMUST00000216558 CebpzP53569 1052 aaKnown RBP17.43■□□□□ 0.38
Ubp1-206ENSMUST00000216558 Rit2P70425 217 aa17.43■□□□□ 0.38
Ubp1-206ENSMUST00000216558 Abcf1Q6P542 837 aaKnown RBP17.43■□□□□ 0.38
Ubp1-206ENSMUST00000216558 Tmem134Q8R0J4 195 aa17.43■□□□□ 0.38
Ubp1-206ENSMUST00000216558 Sgip1Q8VD37 806 aa17.43■□□□□ 0.38
Ubp1-206ENSMUST00000216558 Ccdc94Q9D6J3 314 aa17.43■□□□□ 0.38
Ubp1-206ENSMUST00000216558 Serpinb12Q9D7P9 423 aa17.43■□□□□ 0.38
Ubp1-206ENSMUST00000216558 Gm7168A0AUV4 508 aa17.42■□□□□ 0.38
Ubp1-206ENSMUST00000216558 Gabpb2P81069 414 aa17.42■□□□□ 0.38
Ubp1-206ENSMUST00000216558 Tnfaip8l3Q3TBL6 204 aa17.42■□□□□ 0.38
Ubp1-206ENSMUST00000216558 Pbxip1Q3TVI8 727 aa17.42■□□□□ 0.38
Ubp1-206ENSMUST00000216558 Slc10a4Q3UEZ8 437 aa17.42■□□□□ 0.38
Ubp1-206ENSMUST00000216558 Dph1Q5NCQ5 438 aa17.42■□□□□ 0.38
Ubp1-206ENSMUST00000216558 Smarca1Q6PGB8 1046 aa17.42■□□□□ 0.38
Ubp1-206ENSMUST00000216558 Tmem132dQ76HP3 1097 aa17.42■□□□□ 0.38
Ubp1-206ENSMUST00000216558 Rasal3Q8C2K5 1041 aa17.42■□□□□ 0.38
Ubp1-206ENSMUST00000216558 Pnma3Q8JZW8 466 aa17.42■□□□□ 0.38
Ubp1-206ENSMUST00000216558 PccaQ91ZA3 724 aa17.42■□□□□ 0.38
Retrieved 100 of 22,080 RNA–protein pairs in 87 ms