RNA–Protein interactions for RNA: YLR229C

CDC42, Transcript of Small rho-like GTPase, yeastyeast

Gene CDC42, Length 576 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC42YLR229C FHL1P39521 936 aa4.34□□□□□ -1.71
CDC42YLR229C NPT1P39683 429 aaKnown RBP4.34□□□□□ -1.71
CDC42YLR229C YEL028WP39989 153 aa4.34□□□□□ -1.71
CDC42YLR229C ATM1P40416 690 aa4.34□□□□□ -1.71
CDC42YLR229C URM1P40554 99 aaPredicted RBP4.34□□□□□ -1.71
CDC42YLR229C YFL012WP43580 148 aa4.34□□□□□ -1.71
CDC42YLR229C GET1P53192 235 aa4.34□□□□□ -1.71
CDC42YLR229C YTP1P53584 459 aa4.34□□□□□ -1.71
CDC42YLR229C ASI2P53895 289 aa4.34□□□□□ -1.71
CDC42YLR229C SPG3Q04398 127 aaPredicted RBP4.34□□□□□ -1.71
CDC42YLR229C ARP9Q05123 467 aa4.34□□□□□ -1.71
CDC42YLR229C GRX8Q05926 109 aa4.34□□□□□ -1.71
CDC42YLR229C GMC2Q06201 188 aa4.34□□□□□ -1.71
CDC42YLR229C ATG33Q06485 197 aa4.34□□□□□ -1.71
CDC42YLR229C VAM6Q07468 1049 aa4.34□□□□□ -1.71
CDC42YLR229C RSA1Q08932 381 aa4.34□□□□□ -1.71
CDC42YLR229C RGS2Q99188 309 aa4.34□□□□□ -1.71
CDC42YLR229C VCX1Q99385 411 aa4.34□□□□□ -1.71
CDC42YLR229C HIS1P00498 297 aaKnown RBP4.33□□□□□ -1.72
CDC42YLR229C CAR1P00812 333 aaKnown RBP4.33□□□□□ -1.72
CDC42YLR229C MF(ALPHA)1P01149 165 aa4.33□□□□□ -1.72
CDC42YLR229C GCY1P14065 312 aaKnown RBP RIP-Chip data4.33□□□□□ -1.72not detected
CDC42YLR229C NMT1P14743 455 aa4.33□□□□□ -1.72
CDC42YLR229C HSC82P15108 705 aaKnown RBP4.33□□□□□ -1.72
CDC42YLR229C POL30P15873 258 aaKnown RBP4.33□□□□□ -1.72
CDC42YLR229C SAN1P22470 610 aa4.33□□□□□ -1.72
CDC42YLR229C SPB1P25582 841 aaPredicted RBP4.33□□□□□ -1.72
CDC42YLR229C YCL068CP25593 260 aa4.33□□□□□ -1.72
CDC42YLR229C HRR25P29295 494 aaKnown RBP4.33□□□□□ -1.72
CDC42YLR229C NDI1P32340 513 aa4.33□□□□□ -1.72
CDC42YLR229C VPH1P32563 840 aaKnown RBP4.33□□□□□ -1.72
CDC42YLR229C DSS4P32601 143 aa4.33□□□□□ -1.72
CDC42YLR229C TFB1P32776 642 aa4.33□□□□□ -1.72
CDC42YLR229C CYM1P32898 989 aa4.33□□□□□ -1.72
CDC42YLR229C PTH2P34222 208 aa4.33□□□□□ -1.72
CDC42YLR229C RCN1P36054 211 aa4.33□□□□□ -1.72
CDC42YLR229C RRN3P36070 627 aa4.33□□□□□ -1.72
CDC42YLR229C HMT1P38074 348 aa4.33□□□□□ -1.72
CDC42YLR229C PDX3P38075 228 aaKnown RBP4.33□□□□□ -1.72
CDC42YLR229C YBR056WP38081 501 aa4.33□□□□□ -1.72
CDC42YLR229C KTR4P38131 464 aa4.33□□□□□ -1.72
CDC42YLR229C EDC3P39998 551 aaKnown RBP4.33□□□□□ -1.72
CDC42YLR229C MGS1P40151 587 aa4.33□□□□□ -1.72
CDC42YLR229C SEC28P40509 296 aaKnown RBP4.33□□□□□ -1.72
CDC42YLR229C SER33P40510 469 aa4.33□□□□□ -1.72
CDC42YLR229C RPS10BP46784 105 aaKnown RBP4.33□□□□□ -1.72
CDC42YLR229C BNA3P47039 444 aaKnown RBP4.33□□□□□ -1.72
CDC42YLR229C MAD3P47074 515 aa4.33□□□□□ -1.72
CDC42YLR229C PSP1P50896 841 aaKnown RBP4.33□□□□□ -1.72
CDC42YLR229C RMR1P53060 241 aa4.33□□□□□ -1.72
CDC42YLR229C AIM14P53109 570 aa4.33□□□□□ -1.72
CDC42YLR229C COP1P53622 1201 aaKnown RBP4.33□□□□□ -1.72
CDC42YLR229C ARC35P53731 342 aaKnown RBP4.33□□□□□ -1.72
CDC42YLR229C PRO2P54885 456 aaKnown RBP4.33□□□□□ -1.72
CDC42YLR229C MTD1Q02046 320 aaKnown RBP4.33□□□□□ -1.72
CDC42YLR229C SKI8Q02793 397 aaPredicted RBP4.33□□□□□ -1.72
CDC42YLR229C SVL3Q03088 825 aaKnown RBP4.33□□□□□ -1.72
CDC42YLR229C RLI1Q03195 608 aaKnown RBP4.33□□□□□ -1.72
CDC42YLR229C ENT5Q03769 411 aaKnown RBP4.33□□□□□ -1.72
CDC42YLR229C ARA2Q04212 335 aa4.33□□□□□ -1.72
CDC42YLR229C DYN3Q04949 312 aa4.33□□□□□ -1.72
CDC42YLR229C CDC123Q05791 360 aa4.33□□□□□ -1.72
CDC42YLR229C YLR224WQ05947 369 aa4.33□□□□□ -1.72
CDC42YLR229C RPN8Q08723 338 aaKnown RBP4.33□□□□□ -1.72
CDC42YLR229C RPS10AQ08745 105 aaPredicted RBP4.33□□□□□ -1.72
CDC42YLR229C MUM3Q08750 479 aa4.33□□□□□ -1.72
CDC42YLR229C BUD7Q08754 746 aa4.33□□□□□ -1.72
CDC42YLR229C UPC2Q12151 913 aa4.33□□□□□ -1.72
CDC42YLR229C PSY3Q12318 242 aa4.33□□□□□ -1.72
CDC42YLR229C LDB17Q12342 491 aa4.33□□□□□ -1.72
CDC42YLR229C TPK2P06245 380 aa4.32□□□□□ -1.72
CDC42YLR229C CDC31P06704 161 aaKnown RBP4.32□□□□□ -1.72
CDC42YLR229C COR1P07256 457 aa4.32□□□□□ -1.72
CDC42YLR229C BCY1P07278 416 aaKnown RBP4.32□□□□□ -1.72
CDC42YLR229C HMG1P12683 1054 aa4.32□□□□□ -1.72
CDC42YLR229C SNF4P12904 322 aa4.32□□□□□ -1.72
CDC42YLR229C APE1P14904 514 aa4.32□□□□□ -1.72
CDC42YLR229C AMD2P22580 549 aa4.32□□□□□ -1.72
CDC42YLR229C ADK2P26364 225 aa4.32□□□□□ -1.72
CDC42YLR229C AEP1P32493 518 aa4.32□□□□□ -1.72
CDC42YLR229C MRS6P32864 603 aaKnown RBP4.32□□□□□ -1.72
CDC42YLR229C BEM3P32873 1128 aa4.32□□□□□ -1.72
CDC42YLR229C VPS21P36017 210 aaKnown RBP4.32□□□□□ -1.72
CDC42YLR229C YPK3P38070 525 aa4.32□□□□□ -1.72
CDC42YLR229C FUI1P38196 639 aa4.32□□□□□ -1.72
CDC42YLR229C KAP104P38217 918 aaKnown RBP4.32□□□□□ -1.72
CDC42YLR229C PHO89P38361 574 aa4.32□□□□□ -1.72
CDC42YLR229C SRP68P38687 599 aaKnown RBP4.32□□□□□ -1.72
CDC42YLR229C ARN1P38731 627 aa4.32□□□□□ -1.72
CDC42YLR229C APE4P38821 490 aa4.32□□□□□ -1.72
CDC42YLR229C NAB3P38996 802 aaKnown RBP RIP-Chip data4.32□□□□□ -1.72 RIP-Chip
CDC42YLR229C PLB1P39105 664 aa4.32□□□□□ -1.72
CDC42YLR229C FCY21P40039 528 aa4.32□□□□□ -1.72
CDC42YLR229C CHS6P40955 746 aa4.32□□□□□ -1.72
CDC42YLR229C ROK1P45818 564 aaPredicted RBP4.32□□□□□ -1.72
CDC42YLR229C BNA2P47125 453 aa4.32□□□□□ -1.72
CDC42YLR229C VPS25P47142 202 aa4.32□□□□□ -1.72
CDC42YLR229C HXT16P47185 567 aa4.32□□□□□ -1.72
CDC42YLR229C MRX6P48564 524 aa4.32□□□□□ -1.72
CDC42YLR229C MET13P53128 600 aa4.32□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms