RNA–Protein interactions for RNA: YLR058C

SHM2, Transcript of Cytosolic serine hydroxymethyltransferase, yeastyeast

Gene SHM2, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM2YLR058C HXT15P54854 567 aa10.08□□□□□ -0.8
SHM2YLR058C HAL9Q12180 1030 aa10.08□□□□□ -0.8
SHM2YLR058C YVC1Q12324 675 aa10.08□□□□□ -0.8
SHM2YLR058C JLP1Q12358 412 aa10.08□□□□□ -0.8
SHM2YLR058C PRT1P06103 763 aaKnown RBP10.07□□□□□ -0.8
SHM2YLR058C KIN2P13186 1147 aaKnown RBP10.07□□□□□ -0.8
SHM2YLR058C CCA1P21269 546 aa10.07□□□□□ -0.8
SHM2YLR058C SAN1P22470 610 aa10.07□□□□□ -0.8
SHM2YLR058C MEF1P25039 761 aa10.07□□□□□ -0.8
SHM2YLR058C TRX3P25372 127 aa10.07□□□□□ -0.8
SHM2YLR058C KKQ8P36004 724 aa10.07□□□□□ -0.8
SHM2YLR058C NTR2P36118 322 aaPredicted RBP10.07□□□□□ -0.8
SHM2YLR058C YPS6P40583 537 aa10.07□□□□□ -0.8
SHM2YLR058C AZF1P41696 914 aa10.07□□□□□ -0.8
SHM2YLR058C IDP3P53982 420 aaKnown RBP10.07□□□□□ -0.8
SHM2YLR058C YML096WQ04489 525 aa10.07□□□□□ -0.8
SHM2YLR058C DYN3Q04949 312 aa10.07□□□□□ -0.8
SHM2YLR058C YIG1Q08956 461 aa10.07□□□□□ -0.8
SHM2YLR058C YKL018C-AQ3E7A7 99 aa10.07□□□□□ -0.8
SHM2YLR058C ATP6P00854 259 aa10.07□□□□□ -0.8
SHM2YLR058C PDC5P16467 563 aaKnown RBP10.07□□□□□ -0.8
SHM2YLR058C YKR078WP36158 585 aaKnown RBP10.07□□□□□ -0.8
SHM2YLR058C CBP4P37267 147 aa10.07□□□□□ -0.8
SHM2YLR058C RGA1P39083 1007 aa10.07□□□□□ -0.8
SHM2YLR058C PLB1P39105 664 aa10.07□□□□□ -0.8
SHM2YLR058C CEM1P39525 442 aa10.07□□□□□ -0.8
SHM2YLR058C ALG5P40350 334 aa10.07□□□□□ -0.8
SHM2YLR058C AYR1P40471 297 aa10.07□□□□□ -0.8
SHM2YLR058C YNL140CP53910 189 aa10.07□□□□□ -0.8
SHM2YLR058C RHO3Q00245 231 aaKnown RBP10.07□□□□□ -0.8
SHM2YLR058C IRC15Q02733 499 aa10.07□□□□□ -0.8
SHM2YLR058C ACL4Q03771 387 aa10.07□□□□□ -0.8
SHM2YLR058C YLR111WQ12528 110 aa10.07□□□□□ -0.8
SHM2YLR058C POL2P21951 2222 aaKnown RBP10.06□□□□□ -0.8
SHM2YLR058C KAR1P11927 433 aa10.06□□□□□ -0.8
SHM2YLR058C AAR2P32357 355 aaPredicted RBP10.06□□□□□ -0.8
SHM2YLR058C SPT16P32558 1035 aaKnown RBP10.06□□□□□ -0.8
SHM2YLR058C ATO2P32907 282 aa10.06□□□□□ -0.8
SHM2YLR058C ARA1P38115 344 aa10.06□□□□□ -0.8
SHM2YLR058C YHR033WP38690 423 aa10.06□□□□□ -0.8
SHM2YLR058C AIM22P47051 409 aa10.06□□□□□ -0.8
SHM2YLR058C BCP1Q06338 283 aa10.06□□□□□ -0.8
SHM2YLR058C NMD4Q12129 218 aa10.06□□□□□ -0.8
SHM2YLR058C NSL1Q12143 216 aa10.06□□□□□ -0.8
SHM2YLR058C YOR114WQ12219 294 aa10.06□□□□□ -0.8
SHM2YLR058C LAT1P12695 482 aaKnown RBP10.05□□□□□ -0.8
SHM2YLR058C CMP2P14747 604 aa10.05□□□□□ -0.8
SHM2YLR058C SPS22P25380 463 aa10.05□□□□□ -0.8
SHM2YLR058C CSM1P25651 190 aa10.05□□□□□ -0.8
SHM2YLR058C DOM34P33309 386 aa10.05□□□□□ -0.8
SHM2YLR058C RRN10P38204 145 aa10.05□□□□□ -0.8
SHM2YLR058C ATG7P38862 630 aa10.05□□□□□ -0.8
SHM2YLR058C APQ12P40532 138 aa10.05□□□□□ -0.8
SHM2YLR058C IMA5P40884 581 aa10.05□□□□□ -0.8
SHM2YLR058C FMP32P43557 207 aa10.05□□□□□ -0.8
SHM2YLR058C SUM1P46676 1062 aa10.05□□□□□ -0.8
SHM2YLR058C YNR021WP53723 404 aaKnown RBP10.05□□□□□ -0.8
SHM2YLR058C EGD1Q02642 157 aaKnown RBP10.05□□□□□ -0.8
SHM2YLR058C MTQ2Q03920 221 aaPredicted RBP10.05□□□□□ -0.8
SHM2YLR058C YLL054CQ12244 843 aa10.05□□□□□ -0.8
SHM2YLR058C RAS2P01120 322 aaKnown RBP10.04□□□□□ -0.8
SHM2YLR058C ARG81P05085 880 aa10.04□□□□□ -0.8
SHM2YLR058C TPK2P06245 380 aa10.04□□□□□ -0.8
SHM2YLR058C MRP13P12686 339 aa10.04□□□□□ -0.8
SHM2YLR058C RNQ1P25367 405 aa10.04□□□□□ -0.8
SHM2YLR058C RPT5P33297 434 aaKnown RBP10.04□□□□□ -0.8
SHM2YLR058C SFC1P33303 322 aa10.04□□□□□ -0.8
SHM2YLR058C MRPL17P36528 281 aa10.04□□□□□ -0.8
SHM2YLR058C IST2P38250 946 aa10.04□□□□□ -0.8
SHM2YLR058C COS111P38308 924 aa10.04□□□□□ -0.8
SHM2YLR058C LYS1P38998 373 aaRIP-Chip data10.04□□□□□ -0.8not detected
SHM2YLR058C MET30P39014 640 aa10.04□□□□□ -0.8
SHM2YLR058C LTP1P40347 161 aa10.04□□□□□ -0.8
SHM2YLR058C MAM33P40513 266 aa10.04□□□□□ -0.8
SHM2YLR058C EFR3Q03653 782 aaKnown RBP10.04□□□□□ -0.8
SHM2YLR058C HSP31Q04432 237 aa10.04□□□□□ -0.8
SHM2YLR058C YHC1Q05900 231 aaKnown RBP10.04□□□□□ -0.8
SHM2YLR058C YDL129WQ07555 291 aa10.04□□□□□ -0.8
SHM2YLR058C ATP2P00830 511 aaKnown RBP10.03□□□□□ -0.8
SHM2YLR058C FUR1P18562 216 aaKnown RBP10.03□□□□□ -0.8
SHM2YLR058C TYR1P20049 452 aa10.03□□□□□ -0.8
SHM2YLR058C PRI2P20457 528 aa10.03□□□□□ -0.8
SHM2YLR058C REC107P21651 314 aa10.03□□□□□ -0.8
SHM2YLR058C CDC13P32797 924 aaKnown RBP10.03□□□□□ -0.8
SHM2YLR058C VPS21P36017 210 aaKnown RBP10.03□□□□□ -0.8
SHM2YLR058C UTH1P36135 365 aa10.03□□□□□ -0.8
SHM2YLR058C MAP2P38174 421 aaKnown RBP10.03□□□□□ -0.8
SHM2YLR058C LRO1P40345 661 aa10.03□□□□□ -0.8
SHM2YLR058C MNT3P40549 630 aa10.03□□□□□ -0.8
SHM2YLR058C SEC26P41810 973 aaKnown RBP10.03□□□□□ -0.8
SHM2YLR058C YJL049WP47048 450 aa10.03□□□□□ -0.8
SHM2YLR058C DIA3P52290 468 aa10.03□□□□□ -0.8
SHM2YLR058C ARE2P53629 642 aaKnown RBP10.03□□□□□ -0.8
SHM2YLR058C ROY1Q04847 553 aa10.03□□□□□ -0.8
SHM2YLR058C ATG26Q06321 1198 aa10.03□□□□□ -0.8
SHM2YLR058C GGA1Q06336 557 aa10.03□□□□□ -0.8
SHM2YLR058C RTK1Q12100 620 aaPredicted RBP10.03□□□□□ -0.8
SHM2YLR058C ROT2P38138 954 aa10.02□□□□□ -0.81
SHM2YLR058C MUS81Q04149 632 aaPredicted RBP10.02□□□□□ -0.81
SHM2YLR058C RPN5Q12250 445 aaKnown RBP10.02□□□□□ -0.81
Retrieved 100 of 5,963 RNA–protein pairs in 23.6 ms