RNA–Protein interactions for RNA: YBR049C

REB1, Transcript of RNA polymerase I enhancer binding protein, yeast

Gene REB1, Length 2,433 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
REB1	YBR049C	DDC1	Q08949	612 aa		3.58	□□□□□ -1.84
REB1	YBR049C	TIP41	Q12199	356 aa		3.58	□□□□□ -1.84
REB1	YBR049C	RRP12	Q12754	1228 aa	Known RBP	3.58	□□□□□ -1.84
REB1	YBR049C	RPO31	P04051	1460 aa		3.58	□□□□□ -1.84
REB1	YBR049C	WHI2	P12611	486 aa		3.58	□□□□□ -1.84
REB1	YBR049C	CAF20	P12962	161 aa	Known RBP	3.58	□□□□□ -1.84
REB1	YBR049C	CKA1	P15790	372 aa		3.58	□□□□□ -1.84
REB1	YBR049C	MSP1	P28737	362 aa		3.58	□□□□□ -1.84
REB1	YBR049C	PRE2	P30656	287 aa	Known RBP	3.58	□□□□□ -1.84
REB1	YBR049C	NTH1	P32356	751 aa		3.58	□□□□□ -1.84
REB1	YBR049C	SUA5	P32579	426 aa		3.58	□□□□□ -1.84
REB1	YBR049C	MRPL10	P36520	322 aa		3.58	□□□□□ -1.84
REB1	YBR049C	MRPL37	P36532	105 aa		3.58	□□□□□ -1.84
REB1	YBR049C	YBR053C	P38235	358 aa		3.58	□□□□□ -1.84
REB1	YBR049C	NPR2	P39923	615 aa		3.58	□□□□□ -1.84
REB1	YBR049C	ASG1	P40467	964 aa		3.58	□□□□□ -1.84
REB1	YBR049C	ARC1	P46672	376 aa	Known RBP	3.58	□□□□□ -1.84
REB1	YBR049C	ZAP1	P47043	880 aa		3.58	□□□□□ -1.84
REB1	YBR049C	ILM1	P47155	203 aa		3.58	□□□□□ -1.84
REB1	YBR049C	BIO3	P50277	480 aa		3.58	□□□□□ -1.84
REB1	YBR049C	RCO1	Q04779	684 aa		3.58	□□□□□ -1.84
REB1	YBR049C	RGC1	Q06108	1083 aa	Known RBP	3.58	□□□□□ -1.84
REB1	YBR049C	SRO7	Q12038	1033 aa		3.58	□□□□□ -1.84
REB1	YBR049C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	3.58	□□□□□ -1.84	not detected
REB1	YBR049C	NCB2	Q92317	146 aa		3.58	□□□□□ -1.84
REB1	YBR049C	REV3	P14284	1504 aa		3.57	□□□□□ -1.84
REB1	YBR049C	TUB2	P02557	457 aa	Known RBP	3.57	□□□□□ -1.84
REB1	YBR049C	PMA1	P05030	918 aa	Known RBP	3.57	□□□□□ -1.84
REB1	YBR049C	TY2A-LR1	P0C2J4	438 aa		3.57	□□□□□ -1.84
REB1	YBR049C	TY2A-F	P0CX61	438 aa		3.57	□□□□□ -1.84
REB1	YBR049C	TY2A-GR2	P0CX62	438 aa		3.57	□□□□□ -1.84
REB1	YBR049C	URA4	P20051	364 aa		3.57	□□□□□ -1.84
REB1	YBR049C	KGD1	P20967	1014 aa	Known RBP	3.57	□□□□□ -1.84
REB1	YBR049C	OLE1	P21147	510 aa	Known RBP	3.57	□□□□□ -1.84
REB1	YBR049C	VPS34	P22543	875 aa		3.57	□□□□□ -1.84
REB1	YBR049C	TY2A-C	P25383	438 aa		3.57	□□□□□ -1.84
REB1	YBR049C	SGF29	P25554	259 aa		3.57	□□□□□ -1.84
REB1	YBR049C	YCR101C	P25607	182 aa		3.57	□□□□□ -1.84
REB1	YBR049C	ATP7	P30902	174 aa		3.57	□□□□□ -1.84
REB1	YBR049C	ADH5	P38113	351 aa	Known RBP	3.57	□□□□□ -1.84
REB1	YBR049C	YAP3	P38749	330 aa		3.57	□□□□□ -1.84
REB1	YBR049C	LSM12	P38828	187 aa	Known RBP	3.57	□□□□□ -1.84
REB1	YBR049C	LIN1	P38852	340 aa	Predicted RBP	3.57	□□□□□ -1.84
REB1	YBR049C	RGI2	P40188	164 aa		3.57	□□□□□ -1.84
REB1	YBR049C	YIL001W	P40560	513 aa		3.57	□□□□□ -1.84
REB1	YBR049C	RBL2	P48606	106 aa	Known RBP	3.57	□□□□□ -1.84
REB1	YBR049C	IMD4	P50094	524 aa	Known RBP	3.57	□□□□□ -1.84
REB1	YBR049C	MCM6	P53091	1017 aa	Known RBP	3.57	□□□□□ -1.84
REB1	YBR049C	SGF73	P53165	657 aa		3.57	□□□□□ -1.84
REB1	YBR049C	FCP1	Q03254	732 aa		3.57	□□□□□ -1.84
REB1	YBR049C	RMT2	Q03305	412 aa		3.57	□□□□□ -1.84
REB1	YBR049C	TY2A-DR2	Q03483	438 aa		3.57	□□□□□ -1.84
REB1	YBR049C	SPO77	Q06134	477 aa		3.57	□□□□□ -1.84
REB1	YBR049C	YLR173W	Q06247	608 aa		3.57	□□□□□ -1.84
REB1	YBR049C	RPN8	Q08723	338 aa	Known RBP	3.57	□□□□□ -1.84
REB1	YBR049C	HUA2	Q12134	243 aa		3.57	□□□□□ -1.84
REB1	YBR049C	TY2A-B	Q12260	438 aa		3.57	□□□□□ -1.84
REB1	YBR049C	TY2A-OR2	Q12293	438 aa		3.57	□□□□□ -1.84
REB1	YBR049C	TY2A-DR1	Q12392	438 aa		3.57	□□□□□ -1.84
REB1	YBR049C	ISA2	Q12425	185 aa		3.57	□□□□□ -1.84
REB1	YBR049C	TY2A-OR1	Q12439	438 aa		3.57	□□□□□ -1.84
REB1	YBR049C	LAS17	Q12446	633 aa		3.57	□□□□□ -1.84
REB1	YBR049C	TY2A-DR3	Q99303	438 aa		3.57	□□□□□ -1.84
REB1	YBR049C	SOD2	P00447	233 aa		3.56	□□□□□ -1.84
REB1	YBR049C	MET17	P06106	444 aa		3.56	□□□□□ -1.84
REB1	YBR049C	CBP6	P07253	162 aa	Predicted RBP	3.56	□□□□□ -1.84
REB1	YBR049C	GAL7	P08431	366 aa		3.56	□□□□□ -1.84
REB1	YBR049C	RPL19A	P0CX82	189 aa	Known RBP	3.56	□□□□□ -1.84
REB1	YBR049C	RPL19B	P0CX83	189 aa	Predicted RBP	3.56	□□□□□ -1.84
REB1	YBR049C	CDC24	P11433	854 aa	Predicted RBP	3.56	□□□□□ -1.84
REB1	YBR049C	PTP1	P25044	335 aa		3.56	□□□□□ -1.84
REB1	YBR049C	ADK2	P26364	225 aa		3.56	□□□□□ -1.84
REB1	YBR049C	SEC1	P30619	724 aa	Known RBP	3.56	□□□□□ -1.84
REB1	YBR049C	LST4	P34239	828 aa		3.56	□□□□□ -1.84
REB1	YBR049C	DBP7	P36120	742 aa	Known RBP	3.56	□□□□□ -1.84
REB1	YBR049C	RFT1	P38206	574 aa	Predicted RBP	3.56	□□□□□ -1.84
REB1	YBR049C	SSH1	P38353	490 aa	Known RBP	3.56	□□□□□ -1.84
REB1	YBR049C	REV7	P38927	245 aa		3.56	□□□□□ -1.84
REB1	YBR049C	FHL1	P39521	936 aa		3.56	□□□□□ -1.84
REB1	YBR049C	ELO3	P40319	345 aa		3.56	□□□□□ -1.84
REB1	YBR049C	ATF1	P40353	525 aa		3.56	□□□□□ -1.84
REB1	YBR049C	UTP25	P40498	721 aa	Known RBP	3.56	□□□□□ -1.84
REB1	YBR049C	GLG2	P47011	380 aa		3.56	□□□□□ -1.84
REB1	YBR049C	LSM1	P47017	172 aa	Known RBP	3.56	□□□□□ -1.84
REB1	YBR049C	NET1	P47035	1189 aa		3.56	□□□□□ -1.84
REB1	YBR049C	UBC11	P52492	156 aa		3.56	□□□□□ -1.84
REB1	YBR049C	YGR117C	P53270	476 aa		3.56	□□□□□ -1.84
REB1	YBR049C	EOS1	P53938	366 aa		3.56	□□□□□ -1.84
REB1	YBR049C	NGL3	Q03210	505 aa		3.56	□□□□□ -1.84
REB1	YBR049C	YMR010W	Q03687	405 aa		3.56	□□□□□ -1.84
REB1	YBR049C	COX20	Q04935	205 aa		3.56	□□□□□ -1.84
REB1	YBR049C	HOF1	Q05080	669 aa		3.56	□□□□□ -1.84
REB1	YBR049C	HCR1	Q05775	265 aa	Known RBP	3.56	□□□□□ -1.84
REB1	YBR049C	PIG1	Q06216	648 aa		3.56	□□□□□ -1.84
REB1	YBR049C	MED2	Q12124	431 aa		3.56	□□□□□ -1.84
REB1	YBR049C	RTR2	Q12378	196 aa		3.56	□□□□□ -1.84
REB1	YBR049C	MTR10	Q99189	972 aa		3.56	□□□□□ -1.84
REB1	YBR049C	MYO4	P32492	1471 aa		3.56	□□□□□ -1.84
REB1	YBR049C	ATP2	P00830	511 aa	Known RBP	3.56	□□□□□ -1.84
REB1	YBR049C	RAD7	P06779	565 aa		3.56	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 20.7 ms