RNA–Protein interactions for RNA: ENST00000636881.1

CHD2-226, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 3,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-226ENST00000636881 FRMD3A2A2Y4 597 aa9.42□□□□□ -0.9
CHD2-226ENST00000636881 SRRM3A6NNA2 597 aaPredicted RBP9.42□□□□□ -0.9
CHD2-226ENST00000636881 TNNC1P63316 161 aa9.42□□□□□ -0.9
CHD2-226ENST00000636881 SATB1Q01826 763 aa9.42□□□□□ -0.9
CHD2-226ENST00000636881 PUM3Q15397 648 aaKnown RBP9.42□□□□□ -0.9
CHD2-226ENST00000636881 ANKRD40Q6AI12 368 aa9.42□□□□□ -0.9
CHD2-226ENST00000636881 KLHL7Q8IXQ5 586 aa9.42□□□□□ -0.9
CHD2-226ENST00000636881 CACNA2D3Q8IZS8 1091 aa9.42□□□□□ -0.9
CHD2-226ENST00000636881 FUKQ8N0W3 1084 aa9.42□□□□□ -0.9
CHD2-226ENST00000636881 LPIN2Q92539 896 aa9.42□□□□□ -0.9
CHD2-226ENST00000636881 SGSM3Q96HU1 749 aa9.42□□□□□ -0.9
CHD2-226ENST00000636881 LRP2BPQ9P2M1 347 aa9.42□□□□□ -0.9
CHD2-226ENST00000636881 DDX20Q9UHI6 824 aaKnown RBP9.42□□□□□ -0.9
CHD2-226ENST00000636881 PP2D1A8MPX8 630 aa9.41□□□□□ -0.9
CHD2-226ENST00000636881 KLRC4O43908 158 aa9.41□□□□□ -0.9
CHD2-226ENST00000636881 ECM2O94769 699 aaPredicted RBP9.41□□□□□ -0.9
CHD2-226ENST00000636881 CLSTN1O94985 981 aa9.41□□□□□ -0.9
CHD2-226ENST00000636881 SLC8A1P32418 973 aa9.41□□□□□ -0.9
CHD2-226ENST00000636881 ASIC1P78348 528 aa9.41□□□□□ -0.9
CHD2-226ENST00000636881 FUT2Q10981 343 aa9.41□□□□□ -0.9
CHD2-226ENST00000636881 NAA25Q14CX7 972 aa9.41□□□□□ -0.9
CHD2-226ENST00000636881 EMC10Q5UCC4 262 aa9.41□□□□□ -0.9
CHD2-226ENST00000636881 KLHDC7AQ5VTJ3 777 aa9.41□□□□□ -0.9
CHD2-226ENST00000636881 LRCH2Q5VUJ6 765 aa9.41□□□□□ -0.9
CHD2-226ENST00000636881 C6orf89Q6UWU4 347 aa9.41□□□□□ -0.9
CHD2-226ENST00000636881 TEX11Q8IYF3 940 aa9.41□□□□□ -0.9
CHD2-226ENST00000636881 PIK3R5Q8WYR1 880 aa9.41□□□□□ -0.9
CHD2-226ENST00000636881 TMBIM4Q9HC24 238 aa9.41□□□□□ -0.9
CHD2-226ENST00000636881 TPX2Q9ULW0 747 aaKnown RBP9.41□□□□□ -0.9
CHD2-226ENST00000636881 SPATA31A3Q5VYP0 1347 aa9.41□□□□□ -0.9
CHD2-226ENST00000636881 LRRC53A6NM62 1247 aa9.41□□□□□ -0.9
CHD2-226ENST00000636881 MYL1P05976 194 aa9.41□□□□□ -0.9
CHD2-226ENST00000636881 IFFO1Q0D2I5 559 aa9.41□□□□□ -0.9
CHD2-226ENST00000636881 RASGRF1Q13972 1273 aa9.41□□□□□ -0.9
CHD2-226ENST00000636881 NPY5RQ15761 445 aa9.41□□□□□ -0.9
CHD2-226ENST00000636881 MSL1Q68DK7 614 aa9.41□□□□□ -0.9
CHD2-226ENST00000636881 TMTC3Q6ZXV5 915 aa9.41□□□□□ -0.9
CHD2-226ENST00000636881 FMNL3Q8IVF7 1028 aa9.41□□□□□ -0.9
CHD2-226ENST00000636881 SDR42E1Q8WUS8 393 aa9.41□□□□□ -0.9
CHD2-226ENST00000636881 LUC7LQ9NQ29 371 aaKnown RBP9.41□□□□□ -0.9
CHD2-226ENST00000636881 SCG2P13521 617 aa9.4□□□□□ -0.9
CHD2-226ENST00000636881 CTSWP56202 376 aa9.4□□□□□ -0.9
CHD2-226ENST00000636881 GFPT1Q06210 699 aaPredicted RBP9.4□□□□□ -0.9
CHD2-226ENST00000636881 CRYMQ14894 314 aa9.4□□□□□ -0.9
CHD2-226ENST00000636881 ANKRD20A8PQ5CZ79 823 aa9.4□□□□□ -0.9
CHD2-226ENST00000636881 MIIPQ5JXC2 388 aa9.4□□□□□ -0.9
CHD2-226ENST00000636881 CPLX4Q7Z7G2 160 aa9.4□□□□□ -0.9
CHD2-226ENST00000636881 TAF4BQ92750 862 aa9.4□□□□□ -0.9
CHD2-226ENST00000636881 MTMR8Q96EF0 704 aa9.4□□□□□ -0.9
CHD2-226ENST00000636881 PNPLA7Q6ZV29 1317 aa9.4□□□□□ -0.9
CHD2-226ENST00000636881 CNTNAP5Q8WYK1 1306 aa9.4□□□□□ -0.9
CHD2-226ENST00000636881 FTCDO95954 541 aa9.4□□□□□ -0.9
CHD2-226ENST00000636881 RPSAP08865 295 aaKnown RBP9.4□□□□□ -0.9
CHD2-226ENST00000636881 CYP7A1P22680 504 aa9.4□□□□□ -0.9
CHD2-226ENST00000636881 CTNNA1P35221 906 aaKnown RBP9.4□□□□□ -0.9
CHD2-226ENST00000636881 SLC1A4P43007 532 aa9.4□□□□□ -0.9
CHD2-226ENST00000636881 NAALADL2Q58DX5 795 aa9.4□□□□□ -0.9
CHD2-226ENST00000636881 RUFY4Q6ZNE9 571 aa9.4□□□□□ -0.9
CHD2-226ENST00000636881 TMC4Q7Z404 712 aa9.4□□□□□ -0.9
CHD2-226ENST00000636881 VGLL2Q8N8G2 317 aa9.4□□□□□ -0.9
CHD2-226ENST00000636881 C1orf131Q8NDD1 294 aaKnown RBP9.4□□□□□ -0.9
CHD2-226ENST00000636881 LRRC45Q96CN5 670 aa9.4□□□□□ -0.9
CHD2-226ENST00000636881 SEC16BQ96JE7 1060 aa9.4□□□□□ -0.9
CHD2-226ENST00000636881 SALL4Q9UJQ4 1053 aa9.4□□□□□ -0.9
CHD2-226ENST00000636881 CCDC194A0A1B0GVG4 234 aa9.4□□□□□ -0.91
CHD2-226ENST00000636881 BACH1O14867 736 aa9.4□□□□□ -0.91
CHD2-226ENST00000636881 PJA2O43164 708 aa9.4□□□□□ -0.91
CHD2-226ENST00000636881 PAX7P23759 505 aa9.4□□□□□ -0.91
CHD2-226ENST00000636881 CALML3P27482 149 aa9.4□□□□□ -0.91
CHD2-226ENST00000636881 CALRP27797 417 aaKnown RBP9.4□□□□□ -0.91
CHD2-226ENST00000636881 TMOD1P28289 359 aa9.4□□□□□ -0.91
CHD2-226ENST00000636881 HNRNPH3P31942 346 aaKnown RBP9.4□□□□□ -0.91
CHD2-226ENST00000636881 HSPA9P38646 679 aaKnown RBP9.4□□□□□ -0.91
CHD2-226ENST00000636881 PPP1R2P41236 205 aa9.4□□□□□ -0.91
CHD2-226ENST00000636881 MRPL12P52815 198 aaKnown RBP9.4□□□□□ -0.91
CHD2-226ENST00000636881 TRIM28Q13263 835 aaKnown RBP9.4□□□□□ -0.91
CHD2-226ENST00000636881 CHRNA2Q15822 529 aa9.4□□□□□ -0.91
CHD2-226ENST00000636881 VWA3BQ502W6 1294 aa9.4□□□□□ -0.91
CHD2-226ENST00000636881 LRIG3Q6UXM1 1119 aa9.4□□□□□ -0.91
CHD2-226ENST00000636881 RNF10Q8N5U6 811 aaKnown RBP9.4□□□□□ -0.91
CHD2-226ENST00000636881 OSBPL7Q9BZF2 842 aa9.4□□□□□ -0.91
CHD2-226ENST00000636881 TANGO6Q9C0B7 1094 aa9.4□□□□□ -0.91
CHD2-226ENST00000636881 DNM1LO00429 736 aa9.39□□□□□ -0.91
CHD2-226ENST00000636881 IRS4O14654 1257 aaPredicted RBP9.39□□□□□ -0.91
CHD2-226ENST00000636881 RAD51CO43502 376 aa9.39□□□□□ -0.91
CHD2-226ENST00000636881 PALMO75781 387 aa9.39□□□□□ -0.91
CHD2-226ENST00000636881 LCA5LO95447 670 aa9.39□□□□□ -0.91
CHD2-226ENST00000636881 SCTRP47872 440 aa9.39□□□□□ -0.91
CHD2-226ENST00000636881 C3orf20Q8ND61 904 aa9.39□□□□□ -0.91
CHD2-226ENST00000636881 OR2W6PQ8NHA6 318 aa9.39□□□□□ -0.91
CHD2-226ENST00000636881 UBLCP1Q8WVY7 318 aaPredicted RBP9.39□□□□□ -0.91
CHD2-226ENST00000636881 RSRC1Q96IZ7 334 aaKnown RBP9.39□□□□□ -0.91
CHD2-226ENST00000636881 NDST4Q9H3R1 872 aa9.39□□□□□ -0.91
CHD2-226ENST00000636881 SLC24A3Q9HC58 644 aa9.39□□□□□ -0.91
CHD2-226ENST00000636881 PLCB1Q9NQ66 1216 aa9.39□□□□□ -0.91
CHD2-226ENST00000636881 BAIAP2L1Q9UHR4 511 aa9.39□□□□□ -0.91
CHD2-226ENST00000636881 GRID2IPA4D2P6 1211 aa9.39□□□□□ -0.91
CHD2-226ENST00000636881 EPHB6O15197 1021 aa9.39□□□□□ -0.91
CHD2-226ENST00000636881 DDAH1O94760 285 aa9.39□□□□□ -0.91
CHD2-226ENST00000636881 TRADDQ15628 312 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms