RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 C6orf50Q9HD87 102 aa16.19■□□□□ 0.18
CLN6-215ENST00000636674 STK17AQ9UEE5 414 aa16.19■□□□□ 0.18
CLN6-215ENST00000636674 PVALEFA0A1B0GWK0 134 aa16.19■□□□□ 0.18
CLN6-215ENST00000636674 KLRF2D3W0D1 207 aa16.19■□□□□ 0.18
CLN6-215ENST00000636674 USO1O60763 962 aaKnown RBP16.19■□□□□ 0.18
CLN6-215ENST00000636674 BAG3O95817 575 aa16.19■□□□□ 0.18
CLN6-215ENST00000636674 LDHBP07195 334 aaKnown RBP16.19■□□□□ 0.18
CLN6-215ENST00000636674 FCER1AP12319 257 aa16.19■□□□□ 0.18
CLN6-215ENST00000636674 NAPAP54920 295 aa16.19■□□□□ 0.18
CLN6-215ENST00000636674 TXNRD3Q86VQ6 643 aa16.19■□□□□ 0.18
CLN6-215ENST00000636674 ZNF444Q8N0Y2 327 aaPredicted RBP16.19■□□□□ 0.18
CLN6-215ENST00000636674 AFAP1L1Q8TED9 768 aa16.19■□□□□ 0.18
CLN6-215ENST00000636674 CAPZA3Q96KX2 299 aa16.19■□□□□ 0.18
CLN6-215ENST00000636674 CCDC42Q96M95 316 aa16.19■□□□□ 0.18
CLN6-215ENST00000636674 SEMA6BQ9H3T3 888 aa16.19■□□□□ 0.18
CLN6-215ENST00000636674 ZNF287Q9HBT7 754 aa16.19■□□□□ 0.18
CLN6-215ENST00000636674 CCNT1O60563 726 aaKnown RBP16.18■□□□□ 0.18
CLN6-215ENST00000636674 TACC1O75410 805 aa16.18■□□□□ 0.18
CLN6-215ENST00000636674 TNNT3P45378 269 aaPredicted RBP16.18■□□□□ 0.18
CLN6-215ENST00000636674 VWA3BQ502W6 1294 aa16.18■□□□□ 0.18
CLN6-215ENST00000636674 CCDC70Q6NSX1 233 aa16.18■□□□□ 0.18
CLN6-215ENST00000636674 ARHGAP27Q6ZUM4 889 aa16.18■□□□□ 0.18
CLN6-215ENST00000636674 UNC13DQ70J99 1090 aa16.18■□□□□ 0.18
CLN6-215ENST00000636674 CREG2Q8IUH2 290 aa16.18■□□□□ 0.18
CLN6-215ENST00000636674 GOLGA6L1Q8N7Z2 621 aa16.18■□□□□ 0.18
CLN6-215ENST00000636674 CAGE1Q8TC20 777 aa16.18■□□□□ 0.18
CLN6-215ENST00000636674 AENQ8WTP8 325 aaKnown RBP16.18■□□□□ 0.18
CLN6-215ENST00000636674 CALML4Q96GE6 196 aa16.18■□□□□ 0.18
CLN6-215ENST00000636674 SELENOOQ9BVL4 669 aa16.18■□□□□ 0.18
CLN6-215ENST00000636674 RRP15Q9Y3B9 282 aaKnown RBP16.18■□□□□ 0.18
CLN6-215ENST00000636674 LY75O60449 1722 aa16.18■□□□□ 0.18
CLN6-215ENST00000636674 hCG_1984214I3L0E3 225 aa16.18■□□□□ 0.18
CLN6-215ENST00000636674 MAN2A1Q16706 1144 aa16.18■□□□□ 0.18
CLN6-215ENST00000636674 LETM2Q2VYF4 491 aa16.18■□□□□ 0.18
CLN6-215ENST00000636674 GUF1Q8N442 669 aaKnown RBP16.18■□□□□ 0.18
CLN6-215ENST00000636674 ZNF713Q8N859 430 aaPredicted RBP16.18■□□□□ 0.18
CLN6-215ENST00000636674 PCMTD1Q96MG8 357 aaPredicted RBP16.18■□□□□ 0.18
CLN6-215ENST00000636674 RNF216Q9NWF9 866 aaPredicted RBP16.18■□□□□ 0.18
CLN6-215ENST00000636674 ARHGAP20Q9P2F6 1191 aa16.18■□□□□ 0.18
CLN6-215ENST00000636674 LRWD1Q9UFC0 647 aa16.18■□□□□ 0.18
CLN6-215ENST00000636674 NARFQ9UHQ1 456 aa16.18■□□□□ 0.18
CLN6-215ENST00000636674 FAM184BQ9ULE4 1060 aa16.18■□□□□ 0.18
CLN6-215ENST00000636674 SMCO2A6NFE2 343 aa16.17■□□□□ 0.18
CLN6-215ENST00000636674 PJA2O43164 708 aa16.17■□□□□ 0.18
CLN6-215ENST00000636674 PHACTR2O75167 634 aa16.17■□□□□ 0.18
CLN6-215ENST00000636674 FGFR1OPO95684 399 aaKnown RBP16.17■□□□□ 0.18
CLN6-215ENST00000636674 NOVP48745 357 aa16.17■□□□□ 0.18
CLN6-215ENST00000636674 FXR2P51116 673 aaKnown RBP eCLIP16.17■□□□□ 0.18
CLN6-215ENST00000636674 LRRC63Q05C16 580 aa16.17■□□□□ 0.18
CLN6-215ENST00000636674 LRRC31Q6UY01 552 aa16.17■□□□□ 0.18
CLN6-215ENST00000636674 CCDC84Q86UT8 332 aaPredicted RBP16.17■□□□□ 0.18
CLN6-215ENST00000636674 IFIH1Q9BYX4 1025 aaKnown RBP16.17■□□□□ 0.18
CLN6-215ENST00000636674 EDEM3Q9BZQ6 932 aa16.17■□□□□ 0.18
CLN6-215ENST00000636674 RASSF4Q9H2L5 321 aa16.17■□□□□ 0.18
CLN6-215ENST00000636674 NDST4Q9H3R1 872 aa16.17■□□□□ 0.18
CLN6-215ENST00000636674 STX8Q9UNK0 236 aa16.17■□□□□ 0.18
CLN6-215ENST00000636674 DUSP10Q9Y6W6 482 aa16.17■□□□□ 0.18
CLN6-215ENST00000636674 MACROD2A1Z1Q3 448 aa16.16■□□□□ 0.18
CLN6-215ENST00000636674 ZNF185O15231 689 aa16.16■□□□□ 0.18
CLN6-215ENST00000636674 TCP1P17987 556 aaKnown RBP16.16■□□□□ 0.18
CLN6-215ENST00000636674 TM4SF1P30408 202 aa16.16■□□□□ 0.18
CLN6-215ENST00000636674 KIF11P52732 1056 aa16.16■□□□□ 0.18
CLN6-215ENST00000636674 CYP27A1Q02318 531 aa16.16■□□□□ 0.18
CLN6-215ENST00000636674 GRB10Q13322 594 aa16.16■□□□□ 0.18
CLN6-215ENST00000636674 SLC4A8Q2Y0W8 1093 aa16.16■□□□□ 0.18
CLN6-215ENST00000636674 BICDL1Q6ZP65 573 aa16.16■□□□□ 0.18
CLN6-215ENST00000636674 C16orf86Q6ZW13 317 aa16.16■□□□□ 0.18
CLN6-215ENST00000636674 SV2BQ7L1I2 683 aa16.16■□□□□ 0.18
CLN6-215ENST00000636674 NEDD1Q8NHV4 660 aa16.16■□□□□ 0.18
CLN6-215ENST00000636674 RRP36Q96EU6 259 aaKnown RBP16.16■□□□□ 0.18
CLN6-215ENST00000636674 TRERF1Q96PN7 1200 aa16.16■□□□□ 0.18
CLN6-215ENST00000636674 MTMR9Q96QG7 549 aa16.16■□□□□ 0.18
CLN6-215ENST00000636674 CRACR2AQ9BSW2 395 aa16.16■□□□□ 0.18
CLN6-215ENST00000636674 JADE2Q9NQC1 790 aa16.16■□□□□ 0.18
CLN6-215ENST00000636674 BLOC1S4Q9NUP1 217 aa16.16■□□□□ 0.18
CLN6-215ENST00000636674 LCMT1Q9UIC8 334 aa16.16■□□□□ 0.18
CLN6-215ENST00000636674 PCDHA13Q9Y5I0 950 aa16.16■□□□□ 0.18
CLN6-215ENST00000636674 CAPN6Q9Y6Q1 641 aa16.16■□□□□ 0.18
CLN6-215ENST00000636674 FOCADQ5VW36 1801 aa16.16■□□□□ 0.18
CLN6-215ENST00000636674 SHOX2O60902 331 aaPredicted RBP16.16■□□□□ 0.18
CLN6-215ENST00000636674 LDHCP07864 332 aa16.16■□□□□ 0.18
CLN6-215ENST00000636674 MYBL2P10244 700 aa16.16■□□□□ 0.18
CLN6-215ENST00000636674 CCDC96Q2M329 555 aa16.16■□□□□ 0.18
CLN6-215ENST00000636674 NBPF5PQ86XG9 351 aaPredicted RBP16.16■□□□□ 0.18
CLN6-215ENST00000636674 CCDC155Q8N6L0 562 aa16.16■□□□□ 0.18
CLN6-215ENST00000636674 SLC44A5Q8NCS7 719 aa16.16■□□□□ 0.18
CLN6-215ENST00000636674 SETDB2Q96T68 719 aa16.16■□□□□ 0.18
CLN6-215ENST00000636674 LEMD3Q9Y2U8 911 aa16.16■□□□□ 0.18
CLN6-215ENST00000636674 ATAD5Q96QE3 1844 aa16.15■□□□□ 0.18
CLN6-215ENST00000636674 AGPSO00116 658 aa16.15■□□□□ 0.18
CLN6-215ENST00000636674 TNFRSF8P28908 595 aa16.15■□□□□ 0.18
CLN6-215ENST00000636674 TECP42680 631 aa16.15■□□□□ 0.18
CLN6-215ENST00000636674 EHHADHQ08426 723 aa16.15■□□□□ 0.18
CLN6-215ENST00000636674 C2orf54Q08AI8 447 aa16.15■□□□□ 0.18
CLN6-215ENST00000636674 RC3H1Q5TC82 1133 aaKnown RBP16.15■□□□□ 0.18
CLN6-215ENST00000636674 SOGA3Q5TF21 947 aa16.15■□□□□ 0.18
CLN6-215ENST00000636674 C15orf52Q6ZUT6 534 aaKnown RBP16.15■□□□□ 0.18
CLN6-215ENST00000636674 REXO1Q8N1G1 1221 aaKnown RBP16.15■□□□□ 0.18
CLN6-215ENST00000636674 TBCKQ8TEA7 893 aa16.15■□□□□ 0.18
CLN6-215ENST00000636674 ALS2CR12Q96Q35 445 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms