RNA–Protein interactions for RNA: ENST00000627714.2

PTBP1-220, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5 BASIC

Gene PTBP1, Length 2,201 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-220ENST00000627714 SEMA6BQ9H3T3 888 aa21.36■■□□□ 1.01
PTBP1-220ENST00000627714 TAF1LQ8IZX4 1826 aa21.36■■□□□ 1.01
PTBP1-220ENST00000627714 GRB10Q13322 594 aa21.36■■□□□ 1.01
PTBP1-220ENST00000627714 PPP1R18Q6NYC8 613 aa21.36■■□□□ 1.01
PTBP1-220ENST00000627714 LARP4BQ92615 738 aaKnown RBP21.36■■□□□ 1.01
PTBP1-220ENST00000627714 SECISBP2LQ93073 1101 aaKnown RBP21.36■■□□□ 1.01
PTBP1-220ENST00000627714 HDAC6Q9UBN7 1215 aa21.36■■□□□ 1.01
PTBP1-220ENST00000627714 BIN2Q9UBW5 565 aaPredicted RBP21.36■■□□□ 1.01
PTBP1-220ENST00000627714 GAKO14976 1311 aa21.36■■□□□ 1.01
PTBP1-220ENST00000627714 TXKP42681 527 aa21.35■■□□□ 1.01
PTBP1-220ENST00000627714 KLK7P49862 253 aa21.35■■□□□ 1.01
PTBP1-220ENST00000627714 ADCY7P51828 1080 aa21.35■■□□□ 1.01
PTBP1-220ENST00000627714 RHBDL3P58872 404 aa21.35■■□□□ 1.01
PTBP1-220ENST00000627714 PSMD2Q13200 908 aa21.35■■□□□ 1.01
PTBP1-220ENST00000627714 MAN2A1Q16706 1144 aa21.35■■□□□ 1.01
PTBP1-220ENST00000627714 TRAPPC3LQ5T215 181 aa21.35■■□□□ 1.01
PTBP1-220ENST00000627714 TRIM58Q8NG06 486 aa21.35■■□□□ 1.01
PTBP1-220ENST00000627714 RPGRQ92834 1020 aaKnown RBP21.35■■□□□ 1.01
PTBP1-220ENST00000627714 MMS19Q96T76 1030 aa21.35■■□□□ 1.01
PTBP1-220ENST00000627714 LACRTQ9GZZ8 138 aa21.35■■□□□ 1.01
PTBP1-220ENST00000627714 BLOC1S4Q9NUP1 217 aa21.35■■□□□ 1.01
PTBP1-220ENST00000627714 VPS18Q9P253 973 aa21.35■■□□□ 1.01
PTBP1-220ENST00000627714 GPSM2P81274 684 aa21.35■■□□□ 1.01
PTBP1-220ENST00000627714 PTF1AQ7RTS3 328 aa21.35■■□□□ 1.01
PTBP1-220ENST00000627714 NDST4Q9H3R1 872 aa21.35■■□□□ 1.01
PTBP1-220ENST00000627714 FOCADQ5VW36 1801 aa21.34■■□□□ 1.01
PTBP1-220ENST00000627714 UFL1O94874 794 aa21.34■■□□□ 1.01
PTBP1-220ENST00000627714 PDHBP11177 359 aa21.34■■□□□ 1.01
PTBP1-220ENST00000627714 ARHGAP27Q6ZUM4 889 aa21.34■■□□□ 1.01
PTBP1-220ENST00000627714 GOLGA5Q8TBA6 731 aa21.34■■□□□ 1.01
PTBP1-220ENST00000627714 SUGCTQ9HAC7 445 aa21.34■■□□□ 1.01
PTBP1-220ENST00000627714 VAT1LQ9HCJ6 419 aa21.34■■□□□ 1.01
PTBP1-220ENST00000627714 SLC39A2Q9NP94 309 aa21.34■■□□□ 1.01
PTBP1-220ENST00000627714 GGA1Q9UJY5 639 aa21.34■■□□□ 1.01
PTBP1-220ENST00000627714 SIK3Q9Y2K2 1263 aa21.34■■□□□ 1.01
PTBP1-220ENST00000627714 LY75O60449 1722 aa21.34■■□□□ 1.01
PTBP1-220ENST00000627714 MYMKA6NI61 221 aa21.33■■□□□ 1.01
PTBP1-220ENST00000627714 CERKQ8TCT0 537 aa21.33■■□□□ 1.01
PTBP1-220ENST00000627714 RUBCNQ92622 972 aa21.33■■□□□ 1.01
PTBP1-220ENST00000627714 PNMA5Q96PV4 448 aa21.33■■□□□ 1.01
PTBP1-220ENST00000627714 EDEM3Q9BZQ6 932 aa21.33■■□□□ 1.01
PTBP1-220ENST00000627714 RIC8AQ9NPQ8 531 aa21.33■■□□□ 1.01
PTBP1-220ENST00000627714 CWC15Q9P013 229 aaKnown RBP21.33■■□□□ 1.01
PTBP1-220ENST00000627714 JRKLQ9Y4A0 524 aa21.33■■□□□ 1.01
PTBP1-220ENST00000627714 C10orf71Q711Q0 1435 aa21.33■■□□□ 1
PTBP1-220ENST00000627714 RCCD1A6NED2 376 aa21.33■■□□□ 1
PTBP1-220ENST00000627714 USP17L5A8MUK1 530 aa21.33■■□□□ 1
PTBP1-220ENST00000627714 TACC1O75410 805 aa21.33■■□□□ 1
PTBP1-220ENST00000627714 LCA5LO95447 670 aa21.33■■□□□ 1
PTBP1-220ENST00000627714 IDEP14735 1019 aa21.33■■□□□ 1
PTBP1-220ENST00000627714 LMAN1P49257 510 aa21.33■■□□□ 1
PTBP1-220ENST00000627714 AARSP49588 968 aaKnown RBP eCLIP21.33■■□□□ 12e-6■■■■□ 23.3
PTBP1-220ENST00000627714 SEPT2Q15019 361 aa21.33■■□□□ 1
PTBP1-220ENST00000627714 KRT79Q5XKE5 535 aa21.33■■□□□ 1
PTBP1-220ENST00000627714 CCDC70Q6NSX1 233 aa21.33■■□□□ 1
PTBP1-220ENST00000627714 CAGE1Q8TC20 777 aa21.33■■□□□ 1
PTBP1-220ENST00000627714 RAD54LQ92698 747 aa21.33■■□□□ 1
PTBP1-220ENST00000627714 PRLRP16471 622 aa21.32■■□□□ 1
PTBP1-220ENST00000627714 ITIH3Q06033 890 aa21.32■■□□□ 1
PTBP1-220ENST00000627714 ZSCAN26Q16670 478 aa21.32■■□□□ 1
PTBP1-220ENST00000627714 AMIGO3Q86WK7 504 aa21.32■■□□□ 1
PTBP1-220ENST00000627714 PROM2Q8N271 834 aa21.32■■□□□ 1
PTBP1-220ENST00000627714 EEF2KMTQ96G04 330 aa21.32■■□□□ 1
PTBP1-220ENST00000627714 SNHG28P0DPA3 235 aa21.32■■□□□ 1
PTBP1-220ENST00000627714 CRY2Q49AN0 593 aa21.32■■□□□ 1
PTBP1-220ENST00000627714 MFSD14BQ5SR56 506 aa21.32■■□□□ 1
PTBP1-220ENST00000627714 PPP4R3AQ6IN85 833 aa21.32■■□□□ 1
PTBP1-220ENST00000627714 CCDC102AQ96A19 550 aa21.32■■□□□ 1
PTBP1-220ENST00000627714 TSG101Q99816 390 aa21.32■■□□□ 1
PTBP1-220ENST00000627714 IFIH1Q9BYX4 1025 aaKnown RBP21.32■■□□□ 1
PTBP1-220ENST00000627714 UBA5Q9GZZ9 404 aa21.32■■□□□ 1
PTBP1-220ENST00000627714 TMEM260Q9NX78 707 aa21.32■■□□□ 1
PTBP1-220ENST00000627714 MTMR4Q9NYA4 1195 aa21.32■■□□□ 1
PTBP1-220ENST00000627714 TFR2Q9UP52 801 aa21.32■■□□□ 1
PTBP1-220ENST00000627714 LRRIQ3A6PVS8 624 aaPredicted RBP21.31■■□□□ 1
PTBP1-220ENST00000627714 SRGAP2O75044 1071 aa21.31■■□□□ 1
PTBP1-220ENST00000627714 CCDC96Q2M329 555 aa21.31■■□□□ 1
PTBP1-220ENST00000627714 GPR101Q96P66 508 aaPredicted RBP21.31■■□□□ 1
PTBP1-220ENST00000627714 JADE2Q9NQC1 790 aa21.31■■□□□ 1
PTBP1-220ENST00000627714 GYS2P54840 703 aa21.31■■□□□ 1
PTBP1-220ENST00000627714 TMEM119Q4V9L6 283 aa21.31■■□□□ 1
PTBP1-220ENST00000627714 ZNF572Q7Z3I7 529 aaPredicted RBP21.31■■□□□ 1
PTBP1-220ENST00000627714 CAPZA3Q96KX2 299 aa21.31■■□□□ 1
PTBP1-220ENST00000627714 SH2D4AQ9H788 454 aa21.31■■□□□ 1
PTBP1-220ENST00000627714 PODXL2Q9NZ53 605 aa21.31■■□□□ 1
PTBP1-220ENST00000627714 FAN1Q9Y2M0 1017 aa21.31■■□□□ 1
PTBP1-220ENST00000627714 PCDHA13Q9Y5I0 950 aa21.31■■□□□ 1
PTBP1-220ENST00000627714 MACROD2A1Z1Q3 448 aa21.3■■□□□ 1
PTBP1-220ENST00000627714 ADRA2BP18089 450 aa21.3■■□□□ 1
PTBP1-220ENST00000627714 ACTN2P35609 894 aa21.3■■□□□ 1
PTBP1-220ENST00000627714 CYP27A1Q02318 531 aa21.3■■□□□ 1
PTBP1-220ENST00000627714 EHHADHQ08426 723 aa21.3■■□□□ 1
PTBP1-220ENST00000627714 C2CD5Q86YS7 1000 aa21.3■■□□□ 1
PTBP1-220ENST00000627714 SNX29Q8TEQ0 813 aa21.3■■□□□ 1
PTBP1-220ENST00000627714 RBM17Q96I25 401 aaKnown RBP21.3■■□□□ 1
PTBP1-220ENST00000627714 ALS2CR12Q96Q35 445 aa21.3■■□□□ 1
PTBP1-220ENST00000627714 DEF6Q9H4E7 631 aa21.3■■□□□ 1
PTBP1-220ENST00000627714 ARHGAP20Q9P2F6 1191 aa21.3■■□□□ 1
PTBP1-220ENST00000627714 SNX12Q9UMY4 172 aa21.3■■□□□ 1
PTBP1-220ENST00000627714 SLC37A4O43826 429 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms