RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 SPATA20Q8TB22 786 aa24.19■■□□□ 1.46
SPAST-204ENST00000621856 CALML4Q96GE6 196 aa24.19■■□□□ 1.46
SPAST-204ENST00000621856 C12orf42Q96LP6 360 aa24.19■■□□□ 1.46
SPAST-204ENST00000621856 MBOAT7Q96N66 472 aa24.19■■□□□ 1.46
SPAST-204ENST00000621856 EHMT1Q9H9B1 1298 aa24.19■■□□□ 1.46
SPAST-204ENST00000621856 SLC38A10Q9HBR0 1119 aa24.19■■□□□ 1.46
SPAST-204ENST00000621856 TMOD4Q9NZQ9 345 aa24.19■■□□□ 1.46
SPAST-204ENST00000621856 GLTPD2A6NH11 291 aa24.18■■□□□ 1.46
SPAST-204ENST00000621856 GTPBP6O43824 516 aaPredicted RBP24.18■■□□□ 1.46
SPAST-204ENST00000621856 MORC3Q14149 939 aa24.18■■□□□ 1.46
SPAST-204ENST00000621856 PDIA5Q14554 519 aa24.18■■□□□ 1.46
SPAST-204ENST00000621856 HAS1Q92839 578 aa24.18■■□□□ 1.46
SPAST-204ENST00000621856 RAVER2Q9HCJ3 691 aaKnown RBP24.18■■□□□ 1.46
SPAST-204ENST00000621856 PARP14Q460N5 1801 aa24.18■■□□□ 1.46
SPAST-204ENST00000621856 SMTNL1A8MU46 457 aa24.18■■□□□ 1.46
SPAST-204ENST00000621856 PLCG1P19174 1290 aa24.18■■□□□ 1.46
SPAST-204ENST00000621856 ZNF76P36508 570 aa24.18■■□□□ 1.46
SPAST-204ENST00000621856 VGLL4Q14135 290 aa24.18■■□□□ 1.46
SPAST-204ENST00000621856 BLZF1Q9H2G9 400 aa24.18■■□□□ 1.46
SPAST-204ENST00000621856 CUEDC2Q9H467 287 aa24.18■■□□□ 1.46
SPAST-204ENST00000621856 DACH1Q9UI36 760 aa24.18■■□□□ 1.46
SPAST-204ENST00000621856 CSADQ9Y600 493 aa24.18■■□□□ 1.46
SPAST-204ENST00000621856 FDX1P10109 184 aa24.17■■□□□ 1.46
SPAST-204ENST00000621856 ALAS1P13196 640 aa24.17■■□□□ 1.46
SPAST-204ENST00000621856 TPM4P67936 248 aa24.17■■□□□ 1.46
SPAST-204ENST00000621856 PRR16Q569H4 304 aa24.17■■□□□ 1.46
SPAST-204ENST00000621856 NAALADL2Q58DX5 795 aa24.17■■□□□ 1.46
SPAST-204ENST00000621856 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.17■■□□□ 1.46
SPAST-204ENST00000621856 ZC3H15Q8WU90 426 aaKnown RBP24.17■■□□□ 1.46
SPAST-204ENST00000621856 GSDMAQ96QA5 445 aa24.17■■□□□ 1.46
SPAST-204ENST00000621856 PCDHA12Q9UN75 941 aa24.17■■□□□ 1.46
SPAST-204ENST00000621856 AFG3L2Q9Y4W6 797 aa24.17■■□□□ 1.46
SPAST-204ENST00000621856 SNCAIPQ9Y6H5 919 aa24.17■■□□□ 1.46
SPAST-204ENST00000621856 OTOFQ9HC10 1997 aa24.16■■□□□ 1.46
SPAST-204ENST00000621856 POTEMA6NI47 508 aa24.16■■□□□ 1.46
SPAST-204ENST00000621856 PTMAP06454 111 aaKnown RBP24.16■■□□□ 1.46
SPAST-204ENST00000621856 BMP6P22004 513 aa24.16■■□□□ 1.46
SPAST-204ENST00000621856 NF2P35240 595 aa24.16■■□□□ 1.46
SPAST-204ENST00000621856 IREB2P48200 963 aaKnown RBP24.16■■□□□ 1.46
SPAST-204ENST00000621856 Q4G0T1 1027 aa24.16■■□□□ 1.46
SPAST-204ENST00000621856 MLKLQ8NB16 471 aa24.16■■□□□ 1.46
SPAST-204ENST00000621856 CDK5RAP3Q96JB5 506 aa24.16■■□□□ 1.46
SPAST-204ENST00000621856 MMTAG2Q9BU76 263 aaKnown RBP24.16■■□□□ 1.46
SPAST-204ENST00000621856 KCNMB3Q9NPA1 279 aa24.16■■□□□ 1.46
SPAST-204ENST00000621856 PNMA2Q9UL42 364 aa24.16■■□□□ 1.46
SPAST-204ENST00000621856 UTRNP46939 3433 aa24.16■■□□□ 1.46
SPAST-204ENST00000621856 CYP3A4P08684 503 aa24.15■■□□□ 1.46
SPAST-204ENST00000621856 CIITAP33076 1130 aa24.15■■□□□ 1.46
SPAST-204ENST00000621856 CUL4BQ13620 913 aa24.15■■□□□ 1.46
SPAST-204ENST00000621856 EAPPQ56P03 285 aaPredicted RBP24.15■■□□□ 1.46
SPAST-204ENST00000621856 KRT79Q5XKE5 535 aa24.15■■□□□ 1.46
SPAST-204ENST00000621856 MCF2L2Q86YR7 1114 aa24.15■■□□□ 1.46
SPAST-204ENST00000621856 SLFN12Q8IYM2 578 aa24.15■■□□□ 1.46
SPAST-204ENST00000621856 SNX29Q8TEQ0 813 aa24.15■■□□□ 1.46
SPAST-204ENST00000621856 GJA10Q969M2 543 aa24.15■■□□□ 1.46
SPAST-204ENST00000621856 ATG4CQ96DT6 458 aa24.15■■□□□ 1.46
SPAST-204ENST00000621856 CDCA5Q96FF9 252 aa24.15■■□□□ 1.46
SPAST-204ENST00000621856 UIMC1Q96RL1 719 aa24.15■■□□□ 1.46
SPAST-204ENST00000621856 MTRQ99707 1265 aa24.15■■□□□ 1.46
SPAST-204ENST00000621856 TRIM5Q9C035 493 aa24.15■■□□□ 1.46
SPAST-204ENST00000621856 MAGEF1Q9HAY2 307 aa24.15■■□□□ 1.46
SPAST-204ENST00000621856 WDR90Q96KV7 1748 aa24.15■■□□□ 1.46
SPAST-204ENST00000621856 SCN4AP35499 1836 aa24.15■■□□□ 1.46
SPAST-204ENST00000621856 PAPPA2Q9BXP8 1791 aa24.15■■□□□ 1.46
SPAST-204ENST00000621856 RBBP6Q7Z6E9 1792 aaKnown RBP24.14■■□□□ 1.46
SPAST-204ENST00000621856 IQCA1LA6NCM1 817 aa24.14■■□□□ 1.45
SPAST-204ENST00000621856 VWA5AO00534 786 aa24.14■■□□□ 1.45
SPAST-204ENST00000621856 IKBKBO14920 756 aa24.14■■□□□ 1.45
SPAST-204ENST00000621856 HOMER2Q9NSB8 354 aa24.14■■□□□ 1.45
SPAST-204ENST00000621856 FAM86B1E9PN63 330 aa24.13■■□□□ 1.45
SPAST-204ENST00000621856 NFIBO00712 420 aa24.13■■□□□ 1.45
SPAST-204ENST00000621856 TBX3O15119 743 aa24.13■■□□□ 1.45
SPAST-204ENST00000621856 FAM86B2P0C5J1 330 aa24.13■■□□□ 1.45
SPAST-204ENST00000621856 HSD17B4P51659 736 aa24.13■■□□□ 1.45
SPAST-204ENST00000621856 GRB10Q13322 594 aa24.13■■□□□ 1.45
SPAST-204ENST00000621856 TTLL12Q14166 644 aaPredicted RBP24.13■■□□□ 1.45
SPAST-204ENST00000621856 RBM46Q8TBY0 533 aaKnown RBP24.13■■□□□ 1.45
SPAST-204ENST00000621856 CLEC4DQ8WXI8 215 aa24.13■■□□□ 1.45
SPAST-204ENST00000621856 TAF1DQ9H5J8 278 aaPredicted RBP24.13■■□□□ 1.45
SPAST-204ENST00000621856 ZNF75DP51815 510 aa24.13■■□□□ 1.45
SPAST-204ENST00000621856 MYL5Q02045 173 aa24.13■■□□□ 1.45
SPAST-204ENST00000621856 SARM1Q6SZW1 724 aa24.13■■□□□ 1.45
SPAST-204ENST00000621856 ETNPPLQ8TBG4 499 aa24.13■■□□□ 1.45
SPAST-204ENST00000621856 KBTBD4Q9NVX7 518 aa24.13■■□□□ 1.45
SPAST-204ENST00000621856 RMND1Q9NWS8 449 aa24.13■■□□□ 1.45
SPAST-204ENST00000621856 COL11A1P12107 1806 aaPredicted RBP24.12■■□□□ 1.45
SPAST-204ENST00000621856 RPN1P04843 607 aaKnown RBP24.12■■□□□ 1.45
SPAST-204ENST00000621856 MYL1P05976 194 aa24.12■■□□□ 1.45
SPAST-204ENST00000621856 DSG3P32926 999 aa24.12■■□□□ 1.45
SPAST-204ENST00000621856 UBXN2AP68543 259 aa24.12■■□□□ 1.45
SPAST-204ENST00000621856 SH3D19Q5HYK7 790 aa24.12■■□□□ 1.45
SPAST-204ENST00000621856 LRRC15Q8TF66 581 aa24.12■■□□□ 1.45
SPAST-204ENST00000621856 PNMA5Q96PV4 448 aa24.12■■□□□ 1.45
SPAST-204ENST00000621856 STK17AQ9UEE5 414 aa24.12■■□□□ 1.45
SPAST-204ENST00000621856 RLFQ13129 1914 aa24.12■■□□□ 1.45
SPAST-204ENST00000621856 COG2Q14746 738 aa24.11■■□□□ 1.45
SPAST-204ENST00000621856 NCAPHQ15003 741 aa24.11■■□□□ 1.45
SPAST-204ENST00000621856 MUM1L1Q5H9M0 696 aa24.11■■□□□ 1.45
SPAST-204ENST00000621856 CATSPERGQ6ZRH7 1159 aa24.11■■□□□ 1.45
SPAST-204ENST00000621856 LENG9Q96B70 501 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms