RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 K7ELQ4 463 aaPredicted RBP6.05□□□□□ -1.44
SHMT1-211ENST00000618902 DHX16O60231 1041 aaKnown RBP6.05□□□□□ -1.44
SHMT1-211ENST00000618902 ST18O60284 1047 aa6.05□□□□□ -1.44
SHMT1-211ENST00000618902 TRAK2O60296 914 aa6.05□□□□□ -1.44
SHMT1-211ENST00000618902 FARP2O94887 1054 aaPredicted RBP6.05□□□□□ -1.44
SHMT1-211ENST00000618902 HSP90AA1P07900 732 aaKnown RBP6.05□□□□□ -1.44
SHMT1-211ENST00000618902 AKR1A1P14550 325 aa6.05□□□□□ -1.44
SHMT1-211ENST00000618902 EN2P19622 333 aaPredicted RBP6.05□□□□□ -1.44
SHMT1-211ENST00000618902 KIF5BP33176 963 aa6.05□□□□□ -1.44
SHMT1-211ENST00000618902 DDIT3P35638 169 aa6.05□□□□□ -1.44
SHMT1-211ENST00000618902 GNAQP50148 359 aa6.05□□□□□ -1.44
SHMT1-211ENST00000618902 SOX10P56693 466 aa6.05□□□□□ -1.44
SHMT1-211ENST00000618902 FGD1P98174 961 aa6.05□□□□□ -1.44
SHMT1-211ENST00000618902 CACNB2Q08289 660 aaPredicted RBP6.05□□□□□ -1.44
SHMT1-211ENST00000618902 BAATQ14032 418 aaPredicted RBP6.05□□□□□ -1.44
SHMT1-211ENST00000618902 MTFR1Q15390 333 aa6.05□□□□□ -1.44
SHMT1-211ENST00000618902 WWC2Q6AWC2 1192 aa6.05□□□□□ -1.44
SHMT1-211ENST00000618902 SLC30A10Q6XR72 485 aa6.05□□□□□ -1.44
SHMT1-211ENST00000618902 RNF180Q86T96 592 aa6.05□□□□□ -1.44
SHMT1-211ENST00000618902 FBXO11Q86XK2 927 aa6.05□□□□□ -1.44
SHMT1-211ENST00000618902 ANKRD35Q8N283 1001 aa6.05□□□□□ -1.44
SHMT1-211ENST00000618902 FAM133AQ8N9E0 248 aa6.05□□□□□ -1.44
SHMT1-211ENST00000618902 GPKOWQ92917 476 aaPredicted RBP eCLIP6.05□□□□□ -1.44
SHMT1-211ENST00000618902 AIFM3Q96NN9 605 aa6.05□□□□□ -1.44
SHMT1-211ENST00000618902 DEFB118Q96PH6 123 aa6.05□□□□□ -1.44
SHMT1-211ENST00000618902 CYP39A1Q9NYL5 469 aa6.05□□□□□ -1.44
SHMT1-211ENST00000618902 DDX20Q9UHI6 824 aaKnown RBP6.05□□□□□ -1.44
SHMT1-211ENST00000618902 V9GY48 417 aaPredicted RBP6.05□□□□□ -1.44
SHMT1-211ENST00000618902 MROH7Q68CQ1 1323 aa6.04□□□□□ -1.44
SHMT1-211ENST00000618902 POTEFA5A3E0 1075 aa6.04□□□□□ -1.44
SHMT1-211ENST00000618902 MOXD2PA6NHM9 499 aa6.04□□□□□ -1.44
SHMT1-211ENST00000618902 STXBP3O00186 592 aa6.04□□□□□ -1.44
SHMT1-211ENST00000618902 NKRFO15226 690 aaKnown RBP eCLIP6.04□□□□□ -1.44
SHMT1-211ENST00000618902 JAK2O60674 1132 aa6.04□□□□□ -1.44
SHMT1-211ENST00000618902 DUSP11O75319 330 aaKnown RBP6.04□□□□□ -1.44
SHMT1-211ENST00000618902 CABYRO75952 493 aa6.04□□□□□ -1.44
SHMT1-211ENST00000618902 SNAI1O95863 264 aaPredicted RBP6.04□□□□□ -1.44
SHMT1-211ENST00000618902 RARBP10826 455 aa6.04□□□□□ -1.44
SHMT1-211ENST00000618902 COL6A1P12109 1028 aa6.04□□□□□ -1.44
SHMT1-211ENST00000618902 CYBAP13498 195 aa6.04□□□□□ -1.44
SHMT1-211ENST00000618902 FDPSP14324 419 aaKnown RBP6.04□□□□□ -1.44
SHMT1-211ENST00000618902 IFNAR1P17181 557 aa6.04□□□□□ -1.44
SHMT1-211ENST00000618902 PTGS1P23219 599 aa6.04□□□□□ -1.44
SHMT1-211ENST00000618902 CST5P28325 142 aaPredicted RBP6.04□□□□□ -1.44
SHMT1-211ENST00000618902 HOXA13P31271 388 aaPredicted RBP6.04□□□□□ -1.44
SHMT1-211ENST00000618902 CYP2C19P33261 490 aa6.04□□□□□ -1.44
SHMT1-211ENST00000618902 RPS6P62753 249 aaKnown RBP6.04□□□□□ -1.44
SHMT1-211ENST00000618902 GHRHRQ02643 423 aa6.04□□□□□ -1.44
SHMT1-211ENST00000618902 BRDTQ58F21 947 aaPredicted RBP6.04□□□□□ -1.44
SHMT1-211ENST00000618902 PRAMEF19Q5SWL8 479 aa6.04□□□□□ -1.44
SHMT1-211ENST00000618902 TMEM63BQ5T3F8 832 aa6.04□□□□□ -1.44
SHMT1-211ENST00000618902 LHX8Q68G74 356 aa6.04□□□□□ -1.44
SHMT1-211ENST00000618902 IQSEC1Q6DN90 963 aa6.04□□□□□ -1.44
SHMT1-211ENST00000618902 NSMFQ6X4W1 530 aa6.04□□□□□ -1.44
SHMT1-211ENST00000618902 SYNE3Q6ZMZ3 975 aa6.04□□□□□ -1.44
SHMT1-211ENST00000618902 FAM43BQ6ZT52 329 aaPredicted RBP6.04□□□□□ -1.44
SHMT1-211ENST00000618902 FAM177A1Q8N128 213 aaPredicted RBP6.04□□□□□ -1.44
SHMT1-211ENST00000618902 PCSK9Q8NBP7 692 aaKnown RBP6.04□□□□□ -1.44
SHMT1-211ENST00000618902 NSUN7Q8NE18 718 aaKnown RBP6.04□□□□□ -1.44
SHMT1-211ENST00000618902 SYTL5Q8TDW5 730 aaPredicted RBP6.04□□□□□ -1.44
SHMT1-211ENST00000618902 MORC4Q8TE76 937 aa6.04□□□□□ -1.44
SHMT1-211ENST00000618902 GTF3C6Q969F1 213 aa6.04□□□□□ -1.44
SHMT1-211ENST00000618902 RRP36Q96EU6 259 aaKnown RBP6.04□□□□□ -1.44
SHMT1-211ENST00000618902 IWS1Q96ST2 819 aa6.04□□□□□ -1.44
SHMT1-211ENST00000618902 AMNQ9BXJ7 453 aa6.04□□□□□ -1.44
SHMT1-211ENST00000618902 KATNBL1Q9H079 304 aa6.04□□□□□ -1.44
SHMT1-211ENST00000618902 GLT8D2Q9H1C3 349 aa6.04□□□□□ -1.44
SHMT1-211ENST00000618902 UNC93B1Q9H1C4 597 aa6.04□□□□□ -1.44
SHMT1-211ENST00000618902 GJB4Q9NTQ9 266 aa6.04□□□□□ -1.44
SHMT1-211ENST00000618902 RBM28Q9NW13 759 aaKnown RBP6.04□□□□□ -1.44
SHMT1-211ENST00000618902 FAM184BQ9ULE4 1060 aa6.04□□□□□ -1.44
SHMT1-211ENST00000618902 PCDHA1Q9Y5I3 950 aa6.04□□□□□ -1.44
SHMT1-211ENST00000618902 PLXNA1Q9UIW2 1896 aa6.04□□□□□ -1.44
SHMT1-211ENST00000618902 ELP1O95163 1332 aa6.03□□□□□ -1.44
SHMT1-211ENST00000618902 ABCB11O95342 1321 aa6.03□□□□□ -1.44
SHMT1-211ENST00000618902 COL6A3P12111 3177 aa6.03□□□□□ -1.44
SHMT1-211ENST00000618902 CCDC196A0A1B0GTZ2 297 aa6.03□□□□□ -1.44
SHMT1-211ENST00000618902 KBTBD13C9JR72 458 aa6.03□□□□□ -1.44
SHMT1-211ENST00000618902 POTEB2H3BUK9 544 aa6.03□□□□□ -1.44
SHMT1-211ENST00000618902 hCG_1984214I3L0E3 225 aa6.03□□□□□ -1.44
SHMT1-211ENST00000618902 MEIS2O14770 477 aa6.03□□□□□ -1.44
SHMT1-211ENST00000618902 ADCY6O43306 1168 aa6.03□□□□□ -1.44
SHMT1-211ENST00000618902 PRPF3O43395 683 aaKnown RBP6.03□□□□□ -1.44
SHMT1-211ENST00000618902 EDIL3O43854 480 aa6.03□□□□□ -1.44
SHMT1-211ENST00000618902 ZEB2O60315 1214 aa6.03□□□□□ -1.44
SHMT1-211ENST00000618902 EVI5O60447 810 aa6.03□□□□□ -1.44
SHMT1-211ENST00000618902 KPNA6O60684 536 aa6.03□□□□□ -1.44
SHMT1-211ENST00000618902 STAM2O75886 525 aa6.03□□□□□ -1.44
SHMT1-211ENST00000618902 MYCP01106 439 aaPredicted RBP6.03□□□□□ -1.44
SHMT1-211ENST00000618902 CALML3P27482 149 aa6.03□□□□□ -1.44
SHMT1-211ENST00000618902 BMP8BP34820 402 aa6.03□□□□□ -1.44
SHMT1-211ENST00000618902 HSD17B4P51659 736 aa6.03□□□□□ -1.44
SHMT1-211ENST00000618902 NPY5RQ15761 445 aa6.03□□□□□ -1.44
SHMT1-211ENST00000618902 UBE2SQ16763 222 aa6.03□□□□□ -1.44
SHMT1-211ENST00000618902 PFKFB3Q16875 520 aaPredicted RBP6.03□□□□□ -1.44
SHMT1-211ENST00000618902 HS1BP3Q53T59 392 aa6.03□□□□□ -1.44
SHMT1-211ENST00000618902 MCTP2Q6DN12 878 aa6.03□□□□□ -1.44
SHMT1-211ENST00000618902 GPR153Q6NV75 609 aa6.03□□□□□ -1.44
SHMT1-211ENST00000618902 XRRA1Q6P2D8 792 aa6.03□□□□□ -1.44
SHMT1-211ENST00000618902 KCNV1Q6PIU1 500 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms