RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 SPATA9Q9BWV2 254 aa5.44□□□□□ -1.54
CKS1BP3-201ENST00000600888 CFAP74Q9C0B2 1584 aa5.44□□□□□ -1.54
CKS1BP3-201ENST00000600888 OSBPL2Q9H1P3 480 aa5.44□□□□□ -1.54
CKS1BP3-201ENST00000600888 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.44□□□□□ -1.54
CKS1BP3-201ENST00000600888 CLEC1BQ9P126 229 aa5.44□□□□□ -1.54
CKS1BP3-201ENST00000600888 IMPACTQ9P2X3 320 aa5.44□□□□□ -1.54
CKS1BP3-201ENST00000600888 PFDN2Q9UHV9 154 aa5.44□□□□□ -1.54
CKS1BP3-201ENST00000600888 NEO1Q92859 1461 aa5.44□□□□□ -1.54
CKS1BP3-201ENST00000600888 A0A1W2PQ27 194 aa5.43□□□□□ -1.54
CKS1BP3-201ENST00000600888 A0A1W2PQ64 194 aa5.43□□□□□ -1.54
CKS1BP3-201ENST00000600888 A0A1W2PQC6 194 aa5.43□□□□□ -1.54
CKS1BP3-201ENST00000600888 A0A1W2PQD8 194 aa5.43□□□□□ -1.54
CKS1BP3-201ENST00000600888 CYP4F8P98187 520 aa5.43□□□□□ -1.54
CKS1BP3-201ENST00000600888 MVKQ03426 396 aa5.43□□□□□ -1.54
CKS1BP3-201ENST00000600888 IFRD2Q12894 506 aaPredicted RBP5.43□□□□□ -1.54
CKS1BP3-201ENST00000600888 LAPTM5Q13571 262 aa5.43□□□□□ -1.54
CKS1BP3-201ENST00000600888 PRSS53Q2L4Q9 553 aa5.43□□□□□ -1.54
CKS1BP3-201ENST00000600888 KREMEN2Q8NCW0 462 aa5.43□□□□□ -1.54
CKS1BP3-201ENST00000600888 NUP43Q8NFH3 380 aa5.43□□□□□ -1.54
CKS1BP3-201ENST00000600888 INTS4Q96HW7 963 aaKnown RBP5.43□□□□□ -1.54
CKS1BP3-201ENST00000600888 MMP19Q99542 508 aa5.43□□□□□ -1.54
CKS1BP3-201ENST00000600888 AARSD1Q9BTE6 412 aaKnown RBP5.43□□□□□ -1.54
CKS1BP3-201ENST00000600888 LNPKQ9C0E8 428 aa5.43□□□□□ -1.54
CKS1BP3-201ENST00000600888 SLC6A17Q9H1V8 727 aa5.43□□□□□ -1.54
CKS1BP3-201ENST00000600888 ARHGEF4Q9NR80 690 aa5.43□□□□□ -1.54
CKS1BP3-201ENST00000600888 RNF114Q9Y508 228 aa5.43□□□□□ -1.54
CKS1BP3-201ENST00000600888 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.43□□□□□ -1.54
CKS1BP3-201ENST00000600888 RICTORQ6R327 1708 aa5.43□□□□□ -1.54
CKS1BP3-201ENST00000600888 MYO5CQ9NQX4 1742 aa5.43□□□□□ -1.54
CKS1BP3-201ENST00000600888 PLEKHD1A6NEE1 506 aa5.42□□□□□ -1.54
CKS1BP3-201ENST00000600888 LRRC10BA6NIK2 292 aa5.42□□□□□ -1.54
CKS1BP3-201ENST00000600888 ARNTLO00327 626 aa5.42□□□□□ -1.54
CKS1BP3-201ENST00000600888 DIAPH1O60610 1272 aaKnown RBP5.42□□□□□ -1.54
CKS1BP3-201ENST00000600888 MSL3P1P0C860 447 aa5.42□□□□□ -1.54
CKS1BP3-201ENST00000600888 SSRP1Q08945 709 aaKnown RBP5.42□□□□□ -1.54
CKS1BP3-201ENST00000600888 MLANAQ16655 118 aa5.42□□□□□ -1.54
CKS1BP3-201ENST00000600888 SLC35F1Q5T1Q4 408 aa5.42□□□□□ -1.54
CKS1BP3-201ENST00000600888 IQCEQ6IPM2 695 aa5.42□□□□□ -1.54
CKS1BP3-201ENST00000600888 DENND5AQ6IQ26 1287 aa5.42□□□□□ -1.54
CKS1BP3-201ENST00000600888 PRR23BQ6ZRT6 265 aa5.42□□□□□ -1.54
CKS1BP3-201ENST00000600888 TMEM145Q8NBT3 493 aa5.42□□□□□ -1.54
CKS1BP3-201ENST00000600888 DNAJC7Q99615 494 aa5.42□□□□□ -1.54
CKS1BP3-201ENST00000600888 IER2Q9BTL4 223 aa5.42□□□□□ -1.54
CKS1BP3-201ENST00000600888 TMEFF2Q9UIK5 374 aaPredicted RBP5.42□□□□□ -1.54
CKS1BP3-201ENST00000600888 CDK11AQ9UQ88 783 aaPredicted RBP5.42□□□□□ -1.54
CKS1BP3-201ENST00000600888 CDK13Q14004 1512 aaKnown RBP5.42□□□□□ -1.54
CKS1BP3-201ENST00000600888 TRAV20A0A0B4J274 112 aa5.41□□□□□ -1.54
CKS1BP3-201ENST00000600888 C7orf72A4D263 438 aa5.41□□□□□ -1.54
CKS1BP3-201ENST00000600888 PRODHO43272 600 aa5.41□□□□□ -1.54
CKS1BP3-201ENST00000600888 ADCY3O60266 1144 aa5.41□□□□□ -1.54
CKS1BP3-201ENST00000600888 DLX3O60479 287 aa5.41□□□□□ -1.54
CKS1BP3-201ENST00000600888 PPP1R11O60927 126 aaPredicted RBP5.41□□□□□ -1.54
CKS1BP3-201ENST00000600888 FGFR1P11362 822 aa5.41□□□□□ -1.54
CKS1BP3-201ENST00000600888 PDE6BP35913 854 aa5.41□□□□□ -1.54
CKS1BP3-201ENST00000600888 ARL4AP40617 200 aa5.41□□□□□ -1.54
CKS1BP3-201ENST00000600888 RANGAP1P46060 587 aaPredicted RBP5.41□□□□□ -1.54
CKS1BP3-201ENST00000600888 CORO7P57737 925 aa5.41□□□□□ -1.54
CKS1BP3-201ENST00000600888 MAP4K2Q12851 820 aa5.41□□□□□ -1.54
CKS1BP3-201ENST00000600888 NFE2L2Q16236 605 aa5.41□□□□□ -1.54
CKS1BP3-201ENST00000600888 INF2Q27J81 1249 aa5.41□□□□□ -1.54
CKS1BP3-201ENST00000600888 CCDC144BQ3MJ40 725 aa5.41□□□□□ -1.54
CKS1BP3-201ENST00000600888 YOD1Q5VVQ6 348 aaPredicted RBP5.41□□□□□ -1.54
CKS1BP3-201ENST00000600888 E4F1Q66K89 784 aaPredicted RBP5.41□□□□□ -1.54
CKS1BP3-201ENST00000600888 MBLAC2Q68D91 279 aa5.41□□□□□ -1.54
CKS1BP3-201ENST00000600888 NSMFQ6X4W1 530 aa5.41□□□□□ -1.54
CKS1BP3-201ENST00000600888 IRF2BP1Q8IU81 584 aa5.41□□□□□ -1.54
CKS1BP3-201ENST00000600888 ZBTB38Q8NAP3 1195 aaPredicted RBP5.41□□□□□ -1.54
CKS1BP3-201ENST00000600888 KCTD13Q8WZ19 329 aa5.41□□□□□ -1.54
CKS1BP3-201ENST00000600888 OSBP2Q969R2 916 aa5.41□□□□□ -1.54
CKS1BP3-201ENST00000600888 C1orf159Q96HA4 380 aa5.41□□□□□ -1.54
CKS1BP3-201ENST00000600888 FMNL2Q96PY5 1086 aa5.41□□□□□ -1.54
CKS1BP3-201ENST00000600888 DIRC2Q96SL1 478 aa5.41□□□□□ -1.54
CKS1BP3-201ENST00000600888 ZSWIM4Q9H7M6 989 aa5.41□□□□□ -1.54
CKS1BP3-201ENST00000600888 PDLIM7Q9NR12 457 aa5.41□□□□□ -1.54
CKS1BP3-201ENST00000600888 KDM2BQ8NHM5 1336 aa5.41□□□□□ -1.54
CKS1BP3-201ENST00000600888 FRMPD1Q5SYB0 1578 aa5.41□□□□□ -1.54
CKS1BP3-201ENST00000600888 TTC37Q6PGP7 1564 aa5.41□□□□□ -1.54
CKS1BP3-201ENST00000600888 CASKIN1Q8WXD9 1431 aa5.4□□□□□ -1.54
CKS1BP3-201ENST00000600888 MEFVO15553 781 aaPredicted RBP5.4□□□□□ -1.54
CKS1BP3-201ENST00000600888 NPHS1O60500 1241 aa5.4□□□□□ -1.54
CKS1BP3-201ENST00000600888 PABPC1P11940 636 aaKnown RBP5.4□□□□□ -1.54
CKS1BP3-201ENST00000600888 SDHBP21912 280 aa5.4□□□□□ -1.54
CKS1BP3-201ENST00000600888 ERVFRD-1P60508 538 aa5.4□□□□□ -1.54
CKS1BP3-201ENST00000600888 BMS1Q14692 1282 aaKnown RBP5.4□□□□□ -1.54
CKS1BP3-201ENST00000600888 TESK1Q15569 626 aa5.4□□□□□ -1.54
CKS1BP3-201ENST00000600888 ADGRF1Q5T601 910 aa5.4□□□□□ -1.54
CKS1BP3-201ENST00000600888 ACBD5Q5T8D3 534 aaPredicted RBP5.4□□□□□ -1.54
CKS1BP3-201ENST00000600888 DPH6Q7L8W6 267 aa5.4□□□□□ -1.54
CKS1BP3-201ENST00000600888 CCDC103Q8IW40 242 aa5.4□□□□□ -1.54
CKS1BP3-201ENST00000600888 PPIL6Q8IXY8 311 aa5.4□□□□□ -1.54
CKS1BP3-201ENST00000600888 DPF3Q92784 378 aa5.4□□□□□ -1.54
CKS1BP3-201ENST00000600888 DIO2Q92813 273 aa5.4□□□□□ -1.54
CKS1BP3-201ENST00000600888 NSUN3Q9H649 340 aaKnown RBP5.4□□□□□ -1.54
CKS1BP3-201ENST00000600888 ZNF552Q9H707 407 aaPredicted RBP5.4□□□□□ -1.54
CKS1BP3-201ENST00000600888 USP35Q9P2H5 1018 aa5.4□□□□□ -1.54
CKS1BP3-201ENST00000600888 KIF14Q15058 1648 aa5.4□□□□□ -1.55
CKS1BP3-201ENST00000600888 CDC42BPBQ9Y5S2 1711 aa5.4□□□□□ -1.55
CKS1BP3-201ENST00000600888 CCDC18Q5T9S5 1454 aa5.39□□□□□ -1.55
CKS1BP3-201ENST00000600888 FYCO1Q9BQS8 1478 aa5.39□□□□□ -1.55
CKS1BP3-201ENST00000600888 ZMYM4Q5VZL5 1548 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms