RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 A6NJR5 290 aa10.33□□□□□ -0.76
SMAD4-215ENST00000592911 GSG1L2A8MUP6 293 aa10.33□□□□□ -0.76
SMAD4-215ENST00000592911 LPXNO60711 386 aa10.33□□□□□ -0.76
SMAD4-215ENST00000592911 MYOGP15173 224 aa10.33□□□□□ -0.76
SMAD4-215ENST00000592911 KCNJ6P48051 423 aa10.33□□□□□ -0.76
SMAD4-215ENST00000592911 CNTN2Q02246 1040 aa10.33□□□□□ -0.76
SMAD4-215ENST00000592911 PDE4BQ07343 736 aa10.33□□□□□ -0.76
SMAD4-215ENST00000592911 GRB10Q13322 594 aa10.33□□□□□ -0.76
SMAD4-215ENST00000592911 SLFN13Q68D06 897 aa10.33□□□□□ -0.76
SMAD4-215ENST00000592911 TMEM92Q6UXU6 159 aa10.33□□□□□ -0.76
SMAD4-215ENST00000592911 APPBP2Q92624 585 aa10.33□□□□□ -0.76
SMAD4-215ENST00000592911 CEP95Q96GE4 821 aa10.33□□□□□ -0.76
SMAD4-215ENST00000592911 SCLYQ96I15 445 aa10.33□□□□□ -0.76
SMAD4-215ENST00000592911 TRERF1Q96PN7 1200 aa10.33□□□□□ -0.76
SMAD4-215ENST00000592911 PRKAG3Q9UGI9 489 aa10.33□□□□□ -0.76
SMAD4-215ENST00000592911 COL4A6Q14031 1691 aa10.33□□□□□ -0.76
SMAD4-215ENST00000592911 ABHD14A-ACY1A0A1B0GW23 586 aa10.32□□□□□ -0.76
SMAD4-215ENST00000592911 ICAM1P05362 532 aa10.32□□□□□ -0.76
SMAD4-215ENST00000592911 SLC1A4P43007 532 aa10.32□□□□□ -0.76
SMAD4-215ENST00000592911 ERVK-21P61565 698 aa10.32□□□□□ -0.76
SMAD4-215ENST00000592911 KIAA1211Q6ZU35 1233 aa10.32□□□□□ -0.76
SMAD4-215ENST00000592911 FAM178BQ8IXR5 827 aa10.32□□□□□ -0.76
SMAD4-215ENST00000592911 GJD3Q8N144 294 aa10.32□□□□□ -0.76
SMAD4-215ENST00000592911 LRRC47Q8N1G4 583 aaKnown RBP10.32□□□□□ -0.76
SMAD4-215ENST00000592911 DNERQ8NFT8 737 aa10.32□□□□□ -0.76
SMAD4-215ENST00000592911 ARNTL2Q8WYA1 636 aa10.32□□□□□ -0.76
SMAD4-215ENST00000592911 SAMD11Q96NU1 681 aa10.32□□□□□ -0.76
SMAD4-215ENST00000592911 RAD9AQ99638 391 aa10.32□□□□□ -0.76
SMAD4-215ENST00000592911 WDR11Q9BZH6 1224 aa10.32□□□□□ -0.76
SMAD4-215ENST00000592911 NACAP1Q9BZK3 213 aa10.32□□□□□ -0.76
SMAD4-215ENST00000592911 PUS7LQ9H0K6 701 aaKnown RBP10.32□□□□□ -0.76
SMAD4-215ENST00000592911 BOLA2Q9H3K6 86 aa10.32□□□□□ -0.76
SMAD4-215ENST00000592911 UBE2ZQ9H832 354 aaPredicted RBP10.32□□□□□ -0.76
SMAD4-215ENST00000592911 KIAA1217Q5T5P2 1943 aa10.32□□□□□ -0.76
SMAD4-215ENST00000592911 CACNA1HO95180 2353 aa10.32□□□□□ -0.76
SMAD4-215ENST00000592911 RALGAPA2Q2PPJ7 1873 aa10.32□□□□□ -0.76
SMAD4-215ENST00000592911 EPOPA6NHQ4 379 aa10.31□□□□□ -0.76
SMAD4-215ENST00000592911 TMEM232C9JQI7 657 aa10.31□□□□□ -0.76
SMAD4-215ENST00000592911 NCK2O43639 380 aa10.31□□□□□ -0.76
SMAD4-215ENST00000592911 CXCL10P02778 98 aa10.31□□□□□ -0.76
SMAD4-215ENST00000592911 TSPY3P0CV98 308 aa10.31□□□□□ -0.76
SMAD4-215ENST00000592911 TSPY8P0CW00 308 aa10.31□□□□□ -0.76
SMAD4-215ENST00000592911 RLBP1P12271 317 aa10.31□□□□□ -0.76
SMAD4-215ENST00000592911 PSMC6P62333 389 aa10.31□□□□□ -0.76
SMAD4-215ENST00000592911 CNKSR3Q6P9H4 555 aa10.31□□□□□ -0.76
SMAD4-215ENST00000592911 DEFB128Q7Z7B8 93 aa10.31□□□□□ -0.76
SMAD4-215ENST00000592911 FBXO16Q8IX29 292 aaPredicted RBP10.31□□□□□ -0.76
SMAD4-215ENST00000592911 KBTBD3Q8NAB2 608 aa10.31□□□□□ -0.76
SMAD4-215ENST00000592911 SCFD2Q8WU76 684 aa10.31□□□□□ -0.76
SMAD4-215ENST00000592911 TGS1Q96RS0 853 aaKnown RBP10.31□□□□□ -0.76
SMAD4-215ENST00000592911 PRRX2Q99811 253 aa10.31□□□□□ -0.76
SMAD4-215ENST00000592911 HOMER2Q9NSB8 354 aa10.31□□□□□ -0.76
SMAD4-215ENST00000592911 TRMT13Q9NUP7 481 aaKnown RBP10.31□□□□□ -0.76
SMAD4-215ENST00000592911 PATL2C9JE40 543 aaKnown RBP10.3□□□□□ -0.76
SMAD4-215ENST00000592911 GJB5O95377 273 aa10.3□□□□□ -0.76
SMAD4-215ENST00000592911 CYP2C9P11712 490 aa10.3□□□□□ -0.76
SMAD4-215ENST00000592911 ALAS1P13196 640 aa10.3□□□□□ -0.76
SMAD4-215ENST00000592911 EDNRBP24530 442 aa10.3□□□□□ -0.76
SMAD4-215ENST00000592911 NOVP48745 357 aa10.3□□□□□ -0.76
SMAD4-215ENST00000592911 SLC4A3P48751 1232 aa10.3□□□□□ -0.76
SMAD4-215ENST00000592911 TDO2P48775 406 aa10.3□□□□□ -0.76
SMAD4-215ENST00000592911 NT5C2P49902 561 aa10.3□□□□□ -0.76
SMAD4-215ENST00000592911 ALDH5A1P51649 535 aaPredicted RBP10.3□□□□□ -0.76
SMAD4-215ENST00000592911 WDR5P61964 334 aaKnown RBP10.3□□□□□ -0.76
SMAD4-215ENST00000592911 PPP2R5BQ15173 497 aa10.3□□□□□ -0.76
SMAD4-215ENST00000592911 PKN1Q16512 942 aa10.3□□□□□ -0.76
SMAD4-215ENST00000592911 PTPROQ16827 1216 aa10.3□□□□□ -0.76
SMAD4-215ENST00000592911 CSPP1Q1MSJ5 1256 aa10.3□□□□□ -0.76
SMAD4-215ENST00000592911 TIGD5Q53EQ6 642 aa10.3□□□□□ -0.76
SMAD4-215ENST00000592911 BTNL9Q6UXG8 535 aa10.3□□□□□ -0.76
SMAD4-215ENST00000592911 OR6J1Q8NGC5 347 aa10.3□□□□□ -0.76
SMAD4-215ENST00000592911 DCAF4Q8WV16 495 aa10.3□□□□□ -0.76
SMAD4-215ENST00000592911 FTOQ9C0B1 505 aaKnown RBP eCLIP10.3□□□□□ -0.76
SMAD4-215ENST00000592911 DDX19BQ9UMR2 479 aa10.3□□□□□ -0.76
SMAD4-215ENST00000592911 NOD1Q9Y239 953 aa10.3□□□□□ -0.76
SMAD4-215ENST00000592911 ZDBF2Q9HCK1 2354 aa10.3□□□□□ -0.76
SMAD4-215ENST00000592911 POTEB3A0JP26 581 aa10.29□□□□□ -0.76
SMAD4-215ENST00000592911 MINDY4BA8MYZ0 360 aa10.29□□□□□ -0.76
SMAD4-215ENST00000592911 DCXO43602 365 aa10.29□□□□□ -0.76
SMAD4-215ENST00000592911 SELPP16109 830 aa10.29□□□□□ -0.76
SMAD4-215ENST00000592911 MRE11P49959 708 aa10.29□□□□□ -0.76
SMAD4-215ENST00000592911 IKQ13123 557 aaPredicted RBP10.29□□□□□ -0.76
SMAD4-215ENST00000592911 COL19A1Q14993 1142 aa10.29□□□□□ -0.76
SMAD4-215ENST00000592911 NBPF20Q3BBV1 942 aa10.29□□□□□ -0.76
SMAD4-215ENST00000592911 POTEBQ6S5H4 581 aa10.29□□□□□ -0.76
SMAD4-215ENST00000592911 ALYREFQ86V81 257 aaKnown RBP10.29□□□□□ -0.76
SMAD4-215ENST00000592911 RGS22Q8NE09 1264 aa10.29□□□□□ -0.76
SMAD4-215ENST00000592911 NEK9Q8TD19 979 aa10.29□□□□□ -0.76
SMAD4-215ENST00000592911 GPATCH3Q96I76 525 aa10.29□□□□□ -0.76
SMAD4-215ENST00000592911 UPF3BQ9BZI7 483 aaKnown RBP10.29□□□□□ -0.76
SMAD4-215ENST00000592911 RANBP17Q9H2T7 1088 aaKnown RBP10.29□□□□□ -0.76
SMAD4-215ENST00000592911 PDGFCQ9NRA1 345 aa10.29□□□□□ -0.76
SMAD4-215ENST00000592911 ECHDC1Q9NTX5 307 aa10.29□□□□□ -0.76
SMAD4-215ENST00000592911 CCPG1Q9ULG6 757 aa10.29□□□□□ -0.76
SMAD4-215ENST00000592911 PRR12Q9ULL5 1215 aa10.29□□□□□ -0.76
SMAD4-215ENST00000592911 INSL6Q9Y581 213 aa10.29□□□□□ -0.76
SMAD4-215ENST00000592911 EMSYQ7Z589 1322 aa10.29□□□□□ -0.76
SMAD4-215ENST00000592911 WDR19Q8NEZ3 1342 aa10.29□□□□□ -0.76
SMAD4-215ENST00000592911 MYO7AQ13402 2215 aa10.29□□□□□ -0.76
SMAD4-215ENST00000592911 NLRC5Q86WI3 1866 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms