RNA–Protein interactions for RNA: ENST00000590049.5

CAPNS1-209, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5

Gene CAPNS1, Length 592 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-209ENST00000590049 GOLIM4O00461 696 aa13.72□□□□□ -0.21
CAPNS1-209ENST00000590049 LINC01565O15544 149 aa13.72□□□□□ -0.21
CAPNS1-209ENST00000590049 CDC45O75419 566 aa13.72□□□□□ -0.21
CAPNS1-209ENST00000590049 PROS1P07225 676 aa13.72□□□□□ -0.21
CAPNS1-209ENST00000590049 SDSP20132 328 aa13.72□□□□□ -0.21
CAPNS1-209ENST00000590049 COASYQ13057 564 aa13.72□□□□□ -0.21
CAPNS1-209ENST00000590049 ADAM15Q13444 863 aa13.72□□□□□ -0.21
CAPNS1-209ENST00000590049 MTMR3Q13615 1198 aa13.72□□□□□ -0.21
CAPNS1-209ENST00000590049 PPM1JQ5JR12 505 aa13.72□□□□□ -0.21
CAPNS1-209ENST00000590049 LRSAM1Q6UWE0 723 aa13.72□□□□□ -0.21
CAPNS1-209ENST00000590049 SPATA5Q8NB90 893 aa13.72□□□□□ -0.21
CAPNS1-209ENST00000590049 KREMEN2Q8NCW0 462 aa13.72□□□□□ -0.21
CAPNS1-209ENST00000590049 ACER1Q8TDN7 264 aa13.72□□□□□ -0.21
CAPNS1-209ENST00000590049 SNRKQ9NRH2 765 aa13.72□□□□□ -0.21
CAPNS1-209ENST00000590049 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.72□□□□□ -0.21
CAPNS1-209ENST00000590049 ABCF2Q9UG63 623 aa13.72□□□□□ -0.21
CAPNS1-209ENST00000590049 FRYQ5TBA9 3013 aa13.71□□□□□ -0.21
CAPNS1-209ENST00000590049 ABHD14A-ACY1A0A1B0GW23 586 aa13.71□□□□□ -0.21
CAPNS1-209ENST00000590049 EFCAB14O75071 495 aa13.71□□□□□ -0.21
CAPNS1-209ENST00000590049 MCAMP43121 646 aa13.71□□□□□ -0.21
CAPNS1-209ENST00000590049 ZAP70P43403 619 aa13.71□□□□□ -0.21
CAPNS1-209ENST00000590049 LMNB2Q03252 620 aa13.71□□□□□ -0.21
CAPNS1-209ENST00000590049 BFSP2Q13515 415 aa13.71□□□□□ -0.21
CAPNS1-209ENST00000590049 RAB3GAP1Q15042 981 aa13.71□□□□□ -0.21
CAPNS1-209ENST00000590049 SPTY2D1Q68D10 685 aaPredicted RBP13.71□□□□□ -0.21
CAPNS1-209ENST00000590049 CNKSR3Q6P9H4 555 aa13.71□□□□□ -0.21
CAPNS1-209ENST00000590049 ZC3H14Q6PJT7 736 aaKnown RBP13.71□□□□□ -0.21
CAPNS1-209ENST00000590049 NOL8Q76FK4 1167 aaKnown RBP13.71□□□□□ -0.21
CAPNS1-209ENST00000590049 TEX11Q8IYF3 940 aa13.71□□□□□ -0.21
CAPNS1-209ENST00000590049 CRIPAKQ8N1N5 446 aa13.71□□□□□ -0.21
CAPNS1-209ENST00000590049 SP7Q8TDD2 431 aaPredicted RBP13.71□□□□□ -0.21
CAPNS1-209ENST00000590049 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.71□□□□□ -0.213e-7■■■□□ 15.9
CAPNS1-209ENST00000590049 TANC1Q9C0D5 1861 aa13.71□□□□□ -0.21
CAPNS1-209ENST00000590049 SIPA1L1O43166 1804 aa13.71□□□□□ -0.22
CAPNS1-209ENST00000590049 GTF2F1P35269 517 aaKnown RBP eCLIP13.7□□□□□ -0.22
CAPNS1-209ENST00000590049 RASGRF1Q13972 1273 aa13.7□□□□□ -0.22
CAPNS1-209ENST00000590049 ZSCAN25Q6NSZ9 544 aa13.7□□□□□ -0.22
CAPNS1-209ENST00000590049 FBXO11Q86XK2 927 aa13.7□□□□□ -0.22
CAPNS1-209ENST00000590049 TMEM192Q8IY95 271 aa13.7□□□□□ -0.22
CAPNS1-209ENST00000590049 DTWD2Q8NBA8 298 aa13.7□□□□□ -0.22
CAPNS1-209ENST00000590049 DIAPH3Q9NSV4 1193 aa13.7□□□□□ -0.22
CAPNS1-209ENST00000590049 HMG20BQ9P0W2 317 aa13.7□□□□□ -0.22
CAPNS1-209ENST00000590049 RALGAPA2Q2PPJ7 1873 aa13.7□□□□□ -0.22
CAPNS1-209ENST00000590049 ASTN1O14525 1302 aa13.69□□□□□ -0.22
CAPNS1-209ENST00000590049 ATF7P17544 494 aaPredicted RBP13.69□□□□□ -0.22
CAPNS1-209ENST00000590049 TMEM132BQ14DG7 1078 aa13.69□□□□□ -0.22
CAPNS1-209ENST00000590049 TLK2Q86UE8 772 aa13.69□□□□□ -0.22
CAPNS1-209ENST00000590049 RIOX2Q8IUF8 465 aa13.69□□□□□ -0.22
CAPNS1-209ENST00000590049 KBTBD3Q8NAB2 608 aa13.69□□□□□ -0.22
CAPNS1-209ENST00000590049 RUFY2Q8WXA3 655 aa13.69□□□□□ -0.22
CAPNS1-209ENST00000590049 ATG4CQ96DT6 458 aa13.69□□□□□ -0.22
CAPNS1-209ENST00000590049 AP5M1Q9H0R1 490 aa13.69□□□□□ -0.22
CAPNS1-209ENST00000590049 LMAN2LQ9H0V9 348 aa13.69□□□□□ -0.22
CAPNS1-209ENST00000590049 CLEC1BQ9P126 229 aa13.69□□□□□ -0.22
CAPNS1-209ENST00000590049 LRP2BPQ9P2M1 347 aa13.69□□□□□ -0.22
CAPNS1-209ENST00000590049 ZMIZ1Q9ULJ6 1067 aa13.69□□□□□ -0.22
CAPNS1-209ENST00000590049 SORCS3Q9UPU3 1222 aa13.69□□□□□ -0.22
CAPNS1-209ENST00000590049 PDS5AQ29RF7 1337 aaKnown RBP13.68□□□□□ -0.22
CAPNS1-209ENST00000590049 CYSRT1A8MQ03 144 aa13.68□□□□□ -0.22
CAPNS1-209ENST00000590049 FLOT1O75955 427 aa13.68□□□□□ -0.22
CAPNS1-209ENST00000590049 BRD1O95696 1058 aa13.68□□□□□ -0.22
CAPNS1-209ENST00000590049 HTRA4P83105 476 aaPredicted RBP13.68□□□□□ -0.22
CAPNS1-209ENST00000590049 MECOMQ03112 1051 aa13.68□□□□□ -0.22
CAPNS1-209ENST00000590049 TNFAIP2Q03169 654 aa13.68□□□□□ -0.22
CAPNS1-209ENST00000590049 ZNF467Q7Z7K2 595 aaPredicted RBP13.68□□□□□ -0.22
CAPNS1-209ENST00000590049 TICAM2Q86XR7 235 aa13.68□□□□□ -0.22
CAPNS1-209ENST00000590049 MAGEB6Q8N7X4 407 aa13.68□□□□□ -0.22
CAPNS1-209ENST00000590049 FLCNQ8NFG4 579 aa13.68□□□□□ -0.22
CAPNS1-209ENST00000590049 ZBTB22O15209 634 aa13.67□□□□□ -0.22
CAPNS1-209ENST00000590049 IDH1O75874 414 aaKnown RBP13.67□□□□□ -0.22
CAPNS1-209ENST00000590049 LDHCP07864 332 aa13.67□□□□□ -0.22
CAPNS1-209ENST00000590049 ZFYP08048 801 aaPredicted RBP13.67□□□□□ -0.22
CAPNS1-209ENST00000590049 AOC1P19801 751 aa13.67□□□□□ -0.22
CAPNS1-209ENST00000590049 COPB2P35606 906 aa13.67□□□□□ -0.22
CAPNS1-209ENST00000590049 PI16Q6UXB8 463 aa13.67□□□□□ -0.22
CAPNS1-209ENST00000590049 ERICH6Q7L0X2 663 aa13.67□□□□□ -0.22
CAPNS1-209ENST00000590049 DDX11Q96FC9 970 aa13.67□□□□□ -0.22
CAPNS1-209ENST00000590049 RAI14Q9P0K7 980 aa13.67□□□□□ -0.22
CAPNS1-209ENST00000590049 IGSF3O75054 1194 aa13.66□□□□□ -0.22
CAPNS1-209ENST00000590049 CYP2E1P05181 493 aaPredicted RBP13.66□□□□□ -0.22
CAPNS1-209ENST00000590049 GSTO1P78417 241 aa13.66□□□□□ -0.22
CAPNS1-209ENST00000590049 SHC2P98077 582 aa13.66□□□□□ -0.22
CAPNS1-209ENST00000590049 IKBKEQ14164 716 aa13.66□□□□□ -0.22
CAPNS1-209ENST00000590049 CWF19L1Q69YN2 538 aaKnown RBP13.66□□□□□ -0.22
CAPNS1-209ENST00000590049 PPP2R3CQ969Q6 453 aa13.66□□□□□ -0.22
CAPNS1-209ENST00000590049 RTP3Q9BQQ7 232 aa13.66□□□□□ -0.22
CAPNS1-209ENST00000590049 ANTXR1Q9H6X2 564 aa13.66□□□□□ -0.22
CAPNS1-209ENST00000590049 UPF2Q9HAU5 1272 aaKnown RBP13.66□□□□□ -0.22
CAPNS1-209ENST00000590049 NCDNQ9UBB6 729 aa13.66□□□□□ -0.22
CAPNS1-209ENST00000590049 LHX6Q9UPM6 363 aa13.66□□□□□ -0.22
CAPNS1-209ENST00000590049 GNEQ9Y223 722 aaKnown RBP13.66□□□□□ -0.22
CAPNS1-209ENST00000590049 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.65□□□□□ -0.22
CAPNS1-209ENST00000590049 PI15O43692 258 aa13.65□□□□□ -0.22
CAPNS1-209ENST00000590049 HLA-DOAP06340 250 aa13.65□□□□□ -0.22
CAPNS1-209ENST00000590049 STAT3P40763 770 aa13.65□□□□□ -0.22
CAPNS1-209ENST00000590049 ZNF200P98182 395 aaPredicted RBP13.65□□□□□ -0.22
CAPNS1-209ENST00000590049 TBC1D9Q6ZT07 1266 aa13.65□□□□□ -0.22
CAPNS1-209ENST00000590049 SUMF1Q8NBK3 374 aa13.65□□□□□ -0.22
CAPNS1-209ENST00000590049 AFAP1L1Q8TED9 768 aa13.65□□□□□ -0.22
CAPNS1-209ENST00000590049 ZNF384Q8TF68 577 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms