RNA–Protein interactions for RNA: ENST00000578234.1

SMARCD2-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 595 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-207ENST00000578234 RABGGTBP53611 331 aa14.71□□□□□ -0.05
SMARCD2-207ENST00000578234 PPP2R5BQ15173 497 aa14.71□□□□□ -0.05
SMARCD2-207ENST00000578234 SKIV2LQ15477 1246 aaKnown RBP14.71□□□□□ -0.05
SMARCD2-207ENST00000578234 DEFB128Q7Z7B8 93 aa14.71□□□□□ -0.05
SMARCD2-207ENST00000578234 IQCA1Q86XH1 822 aa14.71□□□□□ -0.05
SMARCD2-207ENST00000578234 PNMA1Q8ND90 353 aa14.71□□□□□ -0.05
SMARCD2-207ENST00000578234 OR6J1Q8NGC5 347 aa14.71□□□□□ -0.05
SMARCD2-207ENST00000578234 PPP1R13LQ8WUF5 828 aa14.71□□□□□ -0.05
SMARCD2-207ENST00000578234 ANKS1AQ92625 1134 aa14.71□□□□□ -0.05
SMARCD2-207ENST00000578234 SCLYQ96I15 445 aa14.71□□□□□ -0.05
SMARCD2-207ENST00000578234 ZKSCAN3Q9BRR0 538 aa14.71□□□□□ -0.05
SMARCD2-207ENST00000578234 MTG1Q9BT17 334 aaPredicted RBP14.71□□□□□ -0.05
SMARCD2-207ENST00000578234 RAD50Q92878 1312 aa14.7□□□□□ -0.06
SMARCD2-207ENST00000578234 HIP1O00291 1037 aa14.7□□□□□ -0.06
SMARCD2-207ENST00000578234 KDM4AO75164 1064 aa14.7□□□□□ -0.06
SMARCD2-207ENST00000578234 GOLGA8HP0CJ92 632 aa14.7□□□□□ -0.06
SMARCD2-207ENST00000578234 PDE4AP27815 886 aa14.7□□□□□ -0.06
SMARCD2-207ENST00000578234 USH1GQ495M9 461 aa14.7□□□□□ -0.06
SMARCD2-207ENST00000578234 TJAP1Q5JTD0 557 aa14.7□□□□□ -0.06
SMARCD2-207ENST00000578234 CWC27Q6UX04 472 aaKnown RBP14.7□□□□□ -0.06
SMARCD2-207ENST00000578234 VWCEQ96DN2 955 aa14.7□□□□□ -0.06
SMARCD2-207ENST00000578234 UBA5Q9GZZ9 404 aa14.7□□□□□ -0.06
SMARCD2-207ENST00000578234 DIAPH3Q9NSV4 1193 aa14.7□□□□□ -0.06
SMARCD2-207ENST00000578234 TRMT13Q9NUP7 481 aaKnown RBP14.7□□□□□ -0.06
SMARCD2-207ENST00000578234 SLC4A7Q9Y6M7 1214 aa14.7□□□□□ -0.06
SMARCD2-207ENST00000578234 TNKSO95271 1327 aa14.69□□□□□ -0.06
SMARCD2-207ENST00000578234 TCF20Q9UGU0 1960 aaKnown RBP14.69□□□□□ -0.06
SMARCD2-207ENST00000578234 SCN10AQ9Y5Y9 1956 aa14.69□□□□□ -0.06
SMARCD2-207ENST00000578234 CHD7Q9P2D1 2997 aa14.69□□□□□ -0.06
SMARCD2-207ENST00000578234 PFKMP08237 780 aa14.69□□□□□ -0.06
SMARCD2-207ENST00000578234 TXNP10599 105 aaKnown RBP14.69□□□□□ -0.06
SMARCD2-207ENST00000578234 CYP2C9P11712 490 aa14.69□□□□□ -0.06
SMARCD2-207ENST00000578234 NFRKBQ6P4R8 1299 aa14.69□□□□□ -0.06
SMARCD2-207ENST00000578234 SKAP1Q86WV1 359 aa14.69□□□□□ -0.06
SMARCD2-207ENST00000578234 ADGRF4Q8IZF3 695 aa14.69□□□□□ -0.06
SMARCD2-207ENST00000578234 ZSCAN10Q96SZ4 725 aaPredicted RBP14.69□□□□□ -0.06
SMARCD2-207ENST00000578234 DSCC1Q9BVC3 393 aa14.69□□□□□ -0.06
SMARCD2-207ENST00000578234 KAT14Q9H8E8 782 aa14.69□□□□□ -0.06
SMARCD2-207ENST00000578234 ZSWIM5Q9P217 1185 aa14.69□□□□□ -0.06
SMARCD2-207ENST00000578234 NOD1Q9Y239 953 aa14.69□□□□□ -0.06
SMARCD2-207ENST00000578234 MYOGP15173 224 aa14.68□□□□□ -0.06
SMARCD2-207ENST00000578234 PTPN11Q06124 597 aaPredicted RBP14.68□□□□□ -0.06
SMARCD2-207ENST00000578234 TTLL4Q14679 1199 aa14.68□□□□□ -0.06
SMARCD2-207ENST00000578234 CDC37Q16543 378 aaPredicted RBP14.68□□□□□ -0.06
SMARCD2-207ENST00000578234 NBPF20Q3BBV1 942 aa14.68□□□□□ -0.06
SMARCD2-207ENST00000578234 ASPRV1Q53RT3 343 aa14.68□□□□□ -0.06
SMARCD2-207ENST00000578234 PPP2R2DQ66LE6 453 aa14.68□□□□□ -0.06
SMARCD2-207ENST00000578234 CCDC62Q6P9F0 684 aa14.68□□□□□ -0.06
SMARCD2-207ENST00000578234 CENPQQ7L2Z9 268 aaPredicted RBP14.68□□□□□ -0.06
SMARCD2-207ENST00000578234 ENAHQ8N8S7 591 aaPredicted RBP14.68□□□□□ -0.06
SMARCD2-207ENST00000578234 FTOQ9C0B1 505 aaKnown RBP eCLIP14.68□□□□□ -0.06
SMARCD2-207ENST00000578234 TSPYL2Q9H2G4 693 aaPredicted RBP14.68□□□□□ -0.06
SMARCD2-207ENST00000578234 CPVLQ9H3G5 476 aa14.68□□□□□ -0.06
SMARCD2-207ENST00000578234 CERS4Q9HA82 394 aa14.68□□□□□ -0.06
SMARCD2-207ENST00000578234 CTNNA3Q9UI47 895 aa14.68□□□□□ -0.06
SMARCD2-207ENST00000578234 SPTBN5Q9NRC6 3674 aaKnown RBP14.68□□□□□ -0.06
SMARCD2-207ENST00000578234 LAMA4Q16363 1823 aa14.68□□□□□ -0.06
SMARCD2-207ENST00000578234 ABCB11O95342 1321 aa14.67□□□□□ -0.06
SMARCD2-207ENST00000578234 TTC28Q96AY4 2481 aa14.67□□□□□ -0.06
SMARCD2-207ENST00000578234 B4E1Z4 1266 aa14.67□□□□□ -0.06
SMARCD2-207ENST00000578234 TNFRSF10AO00220 468 aa14.67□□□□□ -0.06
SMARCD2-207ENST00000578234 PITPNM1O00562 1244 aa14.67□□□□□ -0.06
SMARCD2-207ENST00000578234 IMMTQ16891 758 aaKnown RBP14.67□□□□□ -0.06
SMARCD2-207ENST00000578234 MCF2L2Q86YR7 1114 aa14.67□□□□□ -0.06
SMARCD2-207ENST00000578234 RETREG2Q8NC44 543 aa14.67□□□□□ -0.06
SMARCD2-207ENST00000578234 SYTL5Q8TDW5 730 aaPredicted RBP14.67□□□□□ -0.06
SMARCD2-207ENST00000578234 NSUN6Q8TEA1 469 aaKnown RBP14.67□□□□□ -0.06
SMARCD2-207ENST00000578234 TBC1D5Q92609 795 aa14.67□□□□□ -0.06
SMARCD2-207ENST00000578234 COPS5Q92905 334 aa14.67□□□□□ -0.06
SMARCD2-207ENST00000578234 IWS1Q96ST2 819 aa14.67□□□□□ -0.06
SMARCD2-207ENST00000578234 KRT23Q9C075 422 aa14.67□□□□□ -0.06
SMARCD2-207ENST00000578234 CNNM2Q9H8M5 875 aa14.67□□□□□ -0.06
SMARCD2-207ENST00000578234 THEGQ9P2T0 379 aa14.67□□□□□ -0.06
SMARCD2-207ENST00000578234 YBX2Q9Y2T7 364 aaKnown RBP14.67□□□□□ -0.06
SMARCD2-207ENST00000578234 PCDHA11Q9Y5I1 949 aa14.67□□□□□ -0.06
SMARCD2-207ENST00000578234 TRIP12Q14669 1992 aaPredicted RBP14.67□□□□□ -0.06
SMARCD2-207ENST00000578234 SCN5AQ14524 2016 aa14.66□□□□□ -0.06
SMARCD2-207ENST00000578234 DHX16O60231 1041 aaKnown RBP14.66□□□□□ -0.06
SMARCD2-207ENST00000578234 ARIH2O95376 493 aa14.66□□□□□ -0.06
SMARCD2-207ENST00000578234 RFC2P35250 354 aa14.66□□□□□ -0.06
SMARCD2-207ENST00000578234 ADGRE1Q14246 886 aa14.66□□□□□ -0.06
SMARCD2-207ENST00000578234 ATXN2LQ8WWM7 1075 aaKnown RBP14.66□□□□□ -0.06
SMARCD2-207ENST00000578234 TAAR1Q96RJ0 339 aa14.66□□□□□ -0.06
SMARCD2-207ENST00000578234 PPP4R2Q9NY27 417 aa14.66□□□□□ -0.06
SMARCD2-207ENST00000578234 PARP1P09874 1014 aaKnown RBP14.65□□□□□ -0.06
SMARCD2-207ENST00000578234 ACTN1P12814 892 aa14.65□□□□□ -0.06
SMARCD2-207ENST00000578234 ATP2A2P16615 1042 aaKnown RBP14.65□□□□□ -0.06
SMARCD2-207ENST00000578234 MRPS5P82675 430 aaKnown RBP14.65□□□□□ -0.06
SMARCD2-207ENST00000578234 STXBP2Q15833 593 aa14.65□□□□□ -0.06
SMARCD2-207ENST00000578234 QRICH1Q2TAL8 776 aa14.65□□□□□ -0.06
SMARCD2-207ENST00000578234 CHST3Q7LGC8 479 aa14.65□□□□□ -0.06
SMARCD2-207ENST00000578234 FBXO11Q86XK2 927 aa14.65□□□□□ -0.06
SMARCD2-207ENST00000578234 RMDN3Q96TC7 470 aa14.65□□□□□ -0.06
SMARCD2-207ENST00000578234 JMJD4Q9H9V9 463 aa14.65□□□□□ -0.06
SMARCD2-207ENST00000578234 COL20A1Q9P218 1284 aa14.65□□□□□ -0.06
SMARCD2-207ENST00000578234 MRPL11Q9Y3B7 192 aaKnown RBP14.65□□□□□ -0.06
SMARCD2-207ENST00000578234 MYH6P13533 1939 aa14.64□□□□□ -0.07
SMARCD2-207ENST00000578234 GH1P01241 217 aa14.64□□□□□ -0.07
SMARCD2-207ENST00000578234 IQCF3P0C7M6 154 aa14.64□□□□□ -0.07
SMARCD2-207ENST00000578234 ARHGAP1Q07960 439 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms