RNA–Protein interactions for RNA: ENST00000561400.1

HERC1-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-214ENST00000561400 JMYQ8N9B5 988 aa13.3□□□□□ -0.28
HERC1-214ENST00000561400 OXER1Q8TDS5 423 aa13.3□□□□□ -0.28
HERC1-214ENST00000561400 TIGD1Q96MW7 591 aa13.3□□□□□ -0.28
HERC1-214ENST00000561400 BEGAINQ9BUH8 593 aa13.3□□□□□ -0.28
HERC1-214ENST00000561400 FBXO40Q9UH90 709 aa13.3□□□□□ -0.28
HERC1-214ENST00000561400 PLXNA1Q9UIW2 1896 aa13.3□□□□□ -0.28
HERC1-214ENST00000561400 CCDC66A2RUB6 948 aa13.29□□□□□ -0.28
HERC1-214ENST00000561400 GPR25O00155 361 aa13.29□□□□□ -0.28
HERC1-214ENST00000561400 PDCP20941 246 aa13.29□□□□□ -0.28
HERC1-214ENST00000561400 HOXA13P31271 388 aaPredicted RBP13.29□□□□□ -0.28
HERC1-214ENST00000561400 COPB2P35606 906 aa13.29□□□□□ -0.28
HERC1-214ENST00000561400 DDIT3P35638 169 aa13.29□□□□□ -0.28
HERC1-214ENST00000561400 RPS6P62753 249 aaKnown RBP13.29□□□□□ -0.28
HERC1-214ENST00000561400 CBX1P83916 185 aa13.29□□□□□ -0.28
HERC1-214ENST00000561400 SP3Q02447 781 aa13.29□□□□□ -0.28
HERC1-214ENST00000561400 PKP1Q13835 747 aa13.29□□□□□ -0.28
HERC1-214ENST00000561400 BAATQ14032 418 aaPredicted RBP13.29□□□□□ -0.28
HERC1-214ENST00000561400 SLC30A10Q6XR72 485 aa13.29□□□□□ -0.28
HERC1-214ENST00000561400 GPR142Q7Z601 462 aa13.29□□□□□ -0.28
HERC1-214ENST00000561400 CCAR1Q8IX12 1150 aaKnown RBP13.29□□□□□ -0.28
HERC1-214ENST00000561400 FAM177A1Q8N128 213 aaPredicted RBP13.29□□□□□ -0.28
HERC1-214ENST00000561400 CUL5Q93034 780 aa13.29□□□□□ -0.28
HERC1-214ENST00000561400 ARHGAP39Q9C0H5 1083 aa13.29□□□□□ -0.28
HERC1-214ENST00000561400 C6orf50Q9HD87 102 aa13.29□□□□□ -0.28
HERC1-214ENST00000561400 CYP39A1Q9NYL5 469 aa13.29□□□□□ -0.28
HERC1-214ENST00000561400 PCDHA4Q9UN74 947 aa13.29□□□□□ -0.28
HERC1-214ENST00000561400 M0R2N6 131 aa13.29□□□□□ -0.28
HERC1-214ENST00000561400 GNA11P29992 359 aa13.29□□□□□ -0.28
HERC1-214ENST00000561400 MAPK4P31152 587 aa13.29□□□□□ -0.28
HERC1-214ENST00000561400 CLK2P49760 499 aaKnown RBP13.29□□□□□ -0.28
HERC1-214ENST00000561400 HSD17B4P51659 736 aa13.29□□□□□ -0.28
HERC1-214ENST00000561400 MRPL12P52815 198 aaKnown RBP13.29□□□□□ -0.28
HERC1-214ENST00000561400 LACTBP83111 547 aaPredicted RBP13.29□□□□□ -0.28
HERC1-214ENST00000561400 GHRHRQ02643 423 aa13.29□□□□□ -0.28
HERC1-214ENST00000561400 MCF2L2Q86YR7 1114 aa13.29□□□□□ -0.28
HERC1-214ENST00000561400 BLIDQ8IZY5 108 aa13.29□□□□□ -0.28
HERC1-214ENST00000561400 RASGRP4Q8TDF6 673 aa13.29□□□□□ -0.28
HERC1-214ENST00000561400 PURBQ96QR8 312 aaKnown RBP13.29□□□□□ -0.28
HERC1-214ENST00000561400 NCAPGQ9BPX3 1015 aa13.29□□□□□ -0.28
HERC1-214ENST00000561400 COL20A1Q9P218 1284 aa13.29□□□□□ -0.28
HERC1-214ENST00000561400 MYH7BA7E2Y1 1941 aa13.28□□□□□ -0.28
HERC1-214ENST00000561400 BTBD18B2RXH4 712 aa13.28□□□□□ -0.28
HERC1-214ENST00000561400 H3BQV1 296 aa13.28□□□□□ -0.28
HERC1-214ENST00000561400 PIK3CDO00329 1044 aa13.28□□□□□ -0.28
HERC1-214ENST00000561400 STX6O43752 255 aa13.28□□□□□ -0.28
HERC1-214ENST00000561400 FCER1AP12319 257 aa13.28□□□□□ -0.28
HERC1-214ENST00000561400 CALML3P27482 149 aa13.28□□□□□ -0.28
HERC1-214ENST00000561400 NR5A1Q13285 461 aa13.28□□□□□ -0.28
HERC1-214ENST00000561400 IFFO2Q5TF58 517 aa13.28□□□□□ -0.28
HERC1-214ENST00000561400 RNF207Q6ZRF8 634 aa13.28□□□□□ -0.28
HERC1-214ENST00000561400 DIS3L2Q8IYB7 885 aaKnown RBP13.28□□□□□ -0.28
HERC1-214ENST00000561400 ANKRD35Q8N283 1001 aa13.28□□□□□ -0.28
HERC1-214ENST00000561400 DAGLBQ8NCG7 672 aa13.28□□□□□ -0.28
HERC1-214ENST00000561400 TMEM260Q9NX78 707 aa13.28□□□□□ -0.28
HERC1-214ENST00000561400 BIN2Q9UBW5 565 aaPredicted RBP13.28□□□□□ -0.28
HERC1-214ENST00000561400 MTMR6Q9Y217 621 aa13.28□□□□□ -0.28
HERC1-214ENST00000561400 VPS37CA5D8V6 355 aaPredicted RBP13.28□□□□□ -0.28
HERC1-214ENST00000561400 GCOM1H8Y6P7 765 aaPredicted RBP13.28□□□□□ -0.28
HERC1-214ENST00000561400 POLR2MP0CAP2 368 aa13.28□□□□□ -0.28
HERC1-214ENST00000561400 SSR1P43307 286 aaKnown RBP13.28□□□□□ -0.28
HERC1-214ENST00000561400 NOM1Q5C9Z4 860 aaKnown RBP13.28□□□□□ -0.28
HERC1-214ENST00000561400 GALNT17Q6IS24 598 aa13.28□□□□□ -0.28
HERC1-214ENST00000561400 PLEKHH3Q7Z736 793 aa13.28□□□□□ -0.28
HERC1-214ENST00000561400 SYTL5Q8TDW5 730 aaPredicted RBP13.28□□□□□ -0.28
HERC1-214ENST00000561400 MMP19Q99542 508 aa13.28□□□□□ -0.28
HERC1-214ENST00000561400 R3HCC1Q9Y3T6 440 aaKnown RBP13.28□□□□□ -0.28
HERC1-214ENST00000561400 CASP8AP2Q9UKL3 1982 aa13.27□□□□□ -0.28
HERC1-214ENST00000561400 STRNO43815 780 aa13.27□□□□□ -0.28
HERC1-214ENST00000561400 PGK2P07205 417 aa13.27□□□□□ -0.28
HERC1-214ENST00000561400 PTPREP23469 700 aa13.27□□□□□ -0.28
HERC1-214ENST00000561400 KRT2P35908 639 aa13.27□□□□□ -0.28
HERC1-214ENST00000561400 PSMC4P43686 418 aa13.27□□□□□ -0.28
HERC1-214ENST00000561400 CNTN2Q02246 1040 aa13.27□□□□□ -0.28
HERC1-214ENST00000561400 KCTD2Q14681 263 aa13.27□□□□□ -0.28
HERC1-214ENST00000561400 JAKMIP3Q5VZ66 844 aa13.27□□□□□ -0.28
HERC1-214ENST00000561400 FCHSD1Q86WN1 690 aa13.27□□□□□ -0.28
HERC1-214ENST00000561400 REXO1Q8N1G1 1221 aaKnown RBP13.27□□□□□ -0.28
HERC1-214ENST00000561400 ZNF296Q8WUU4 475 aaPredicted RBP13.27□□□□□ -0.28
HERC1-214ENST00000561400 TRIM47Q96LD4 638 aa13.27□□□□□ -0.28
HERC1-214ENST00000561400 MAP3K20Q9NYL2 800 aaKnown RBP13.27□□□□□ -0.28
HERC1-214ENST00000561400 PCDHA6Q9UN73 950 aa13.27□□□□□ -0.28
HERC1-214ENST00000561400 PCDHA8Q9Y5H6 950 aa13.27□□□□□ -0.28
HERC1-214ENST00000561400 MCM3APO60318 1980 aa13.27□□□□□ -0.29
HERC1-214ENST00000561400 ZNF236Q9UL36 1845 aa13.27□□□□□ -0.29
HERC1-214ENST00000561400 DNAJC25-GNG10A0A024R161 153 aa13.27□□□□□ -0.29
HERC1-214ENST00000561400 KIF28PB7ZC32 967 aa13.27□□□□□ -0.29
HERC1-214ENST00000561400 ADORA2AP29274 412 aa13.27□□□□□ -0.29
HERC1-214ENST00000561400 GRB14Q14449 540 aa13.27□□□□□ -0.29
HERC1-214ENST00000561400 EARS2Q5JPH6 523 aaKnown RBP13.27□□□□□ -0.29
HERC1-214ENST00000561400 ABRAQ8N0Z2 381 aa13.27□□□□□ -0.29
HERC1-214ENST00000561400 CD99L2Q8TCZ2 262 aa13.27□□□□□ -0.29
HERC1-214ENST00000561400 BICD2Q8TD16 824 aa13.27□□□□□ -0.29
HERC1-214ENST00000561400 TNFRSF25Q93038 417 aa13.27□□□□□ -0.29
HERC1-214ENST00000561400 PGBD1Q96JS3 809 aa13.27□□□□□ -0.29
HERC1-214ENST00000561400 GLT8D2Q9H1C3 349 aa13.27□□□□□ -0.29
HERC1-214ENST00000561400 IVNS1ABPQ9Y6Y0 642 aa13.27□□□□□ -0.29
HERC1-214ENST00000561400 ASTN1O14525 1302 aa13.26□□□□□ -0.29
HERC1-214ENST00000561400 PFASO15067 1338 aa13.26□□□□□ -0.29
HERC1-214ENST00000561400 TNPO2O14787 897 aaKnown RBP13.26□□□□□ -0.29
HERC1-214ENST00000561400 SAFBQ15424 915 aaKnown RBP eCLIP13.26□□□□□ -0.298e-8■□□□□ 9.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms