RNA–Protein interactions for RNA: ENST00000560952.1

RNF111-211, Transcript of ring finger protein 111, humanhuman

TSL 1 (best)

Gene RNF111, Length 2,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111-211ENST00000560952 CCSAPQ6IQ19 270 aaPredicted RBP3.01□□□□□ -1.93
RNF111-211ENST00000560952 C16orf87Q6PH81 154 aa3.01□□□□□ -1.93
RNF111-211ENST00000560952 TTC6Q86TZ1 520 aa3.01□□□□□ -1.93
RNF111-211ENST00000560952 ANKRD13BQ86YJ7 626 aa3.01□□□□□ -1.93
RNF111-211ENST00000560952 SUGP1Q8IWZ8 645 aaKnown RBP3.01□□□□□ -1.93
RNF111-211ENST00000560952 KIAA1958Q8N8K9 716 aa3.01□□□□□ -1.93
RNF111-211ENST00000560952 ANKS4BQ8N8V4 417 aa3.01□□□□□ -1.93
RNF111-211ENST00000560952 PRPF38AQ8NAV1 312 aaKnown RBP3.01□□□□□ -1.93
RNF111-211ENST00000560952 RASGRP4Q8TDF6 673 aa3.01□□□□□ -1.93
RNF111-211ENST00000560952 VWCEQ96DN2 955 aa3.01□□□□□ -1.93
RNF111-211ENST00000560952 FAM210AQ96ND0 272 aa3.01□□□□□ -1.93
RNF111-211ENST00000560952 CEP89Q96ST8 783 aa3.01□□□□□ -1.93
RNF111-211ENST00000560952 C22orf23Q9BZE7 217 aa3.01□□□□□ -1.93
RNF111-211ENST00000560952 OSBPL2Q9H1P3 480 aa3.01□□□□□ -1.93
RNF111-211ENST00000560952 CAPN10Q9HC96 672 aa3.01□□□□□ -1.93
RNF111-211ENST00000560952 INTUQ9ULD6 942 aa3.01□□□□□ -1.93
RNF111-211ENST00000560952 STRIP2Q9ULQ0 834 aa3.01□□□□□ -1.93
RNF111-211ENST00000560952 PCDHB12Q9Y5F1 795 aa3.01□□□□□ -1.93
RNF111-211ENST00000560952 CECR2Q9BXF3 1484 aa3□□□□□ -1.93
RNF111-211ENST00000560952 TRIM64CA6NLI5 447 aa3□□□□□ -1.93
RNF111-211ENST00000560952 UBOX5O94941 541 aa3□□□□□ -1.93
RNF111-211ENST00000560952 HPXP02790 462 aa3□□□□□ -1.93
RNF111-211ENST00000560952 RBP3P10745 1247 aa3□□□□□ -1.93
RNF111-211ENST00000560952 EIF5P55010 431 aaKnown RBP3□□□□□ -1.93
RNF111-211ENST00000560952 SLC20A2Q08357 652 aa3□□□□□ -1.93
RNF111-211ENST00000560952 WASHC5Q12768 1159 aa3□□□□□ -1.93
RNF111-211ENST00000560952 SNX17Q15036 470 aa3□□□□□ -1.93
RNF111-211ENST00000560952 BRD3Q15059 726 aa3□□□□□ -1.93
RNF111-211ENST00000560952 TOMM20Q15388 145 aa3□□□□□ -1.93
RNF111-211ENST00000560952 NR0B2Q15466 257 aa3□□□□□ -1.93
RNF111-211ENST00000560952 ARMC3Q5W041 872 aa3□□□□□ -1.93
RNF111-211ENST00000560952 EP400NLQ6ZTU2 488 aa3□□□□□ -1.93
RNF111-211ENST00000560952 UBE2Q1Q7Z7E8 422 aa3□□□□□ -1.93
RNF111-211ENST00000560952 SIAH1Q8IUQ4 282 aa3□□□□□ -1.93
RNF111-211ENST00000560952 LMNTD2Q8IXW0 634 aa3□□□□□ -1.93
RNF111-211ENST00000560952 CHPFQ8IZ52 775 aa3□□□□□ -1.93
RNF111-211ENST00000560952 NDUFAF2Q8N183 169 aa3□□□□□ -1.93
RNF111-211ENST00000560952 CCDC89Q8N998 374 aa3□□□□□ -1.93
RNF111-211ENST00000560952 ABHD4Q8TB40 342 aa3□□□□□ -1.93
RNF111-211ENST00000560952 PPM1EQ8WY54 764 aa3□□□□□ -1.93
RNF111-211ENST00000560952 ERP27Q96DN0 273 aa3□□□□□ -1.93
RNF111-211ENST00000560952 CCDC94Q9BW85 323 aaPredicted RBP3□□□□□ -1.93
RNF111-211ENST00000560952 TGIF2Q9GZN2 237 aa3□□□□□ -1.93
RNF111-211ENST00000560952 MKRN2Q9H000 416 aaKnown RBP3□□□□□ -1.93
RNF111-211ENST00000560952 PDCL3Q9H2J4 239 aa3□□□□□ -1.93
RNF111-211ENST00000560952 SUDS3Q9H7L9 328 aaPredicted RBP3□□□□□ -1.93
RNF111-211ENST00000560952 ASAP1Q9ULH1 1129 aa3□□□□□ -1.93
RNF111-211ENST00000560952 CUX2O14529 1486 aa3□□□□□ -1.93
RNF111-211ENST00000560952 PRSS47A8MTI9 375 aa2.99□□□□□ -1.93
RNF111-211ENST00000560952 GOLGA6L6A8MZA4 724 aa2.99□□□□□ -1.93
RNF111-211ENST00000560952 TBX3O15119 743 aa2.99□□□□□ -1.93
RNF111-211ENST00000560952 SIGLEC6O43699 453 aa2.99□□□□□ -1.93
RNF111-211ENST00000560952 PLIN1O60240 522 aa2.99□□□□□ -1.93
RNF111-211ENST00000560952 DNAJA2O60884 412 aa2.99□□□□□ -1.93
RNF111-211ENST00000560952 CCT2P78371 535 aaKnown RBP2.99□□□□□ -1.93
RNF111-211ENST00000560952 ZBED6P86452 979 aa2.99□□□□□ -1.93
RNF111-211ENST00000560952 IFT88Q13099 833 aa2.99□□□□□ -1.93
RNF111-211ENST00000560952 RAPGEF1Q13905 1077 aa2.99□□□□□ -1.93
RNF111-211ENST00000560952 ZNF394Q53GI3 561 aa2.99□□□□□ -1.93
RNF111-211ENST00000560952 MPZL3Q6UWV2 235 aa2.99□□□□□ -1.93
RNF111-211ENST00000560952 KSR1Q8IVT5 923 aa2.99□□□□□ -1.93
RNF111-211ENST00000560952 MYLIPQ8WY64 445 aa2.99□□□□□ -1.93
RNF111-211ENST00000560952 GPRASP2Q96D09 838 aa2.99□□□□□ -1.93
RNF111-211ENST00000560952 CCDC34Q96HJ3 373 aa2.99□□□□□ -1.93
RNF111-211ENST00000560952 FAM84AQ96KN4 292 aa2.99□□□□□ -1.93
RNF111-211ENST00000560952 PRDM7Q9NQW5 492 aa2.99□□□□□ -1.93
RNF111-211ENST00000560952 SUCOQ9UBS9 1254 aaKnown RBP2.99□□□□□ -1.93
RNF111-211ENST00000560952 IP6K2Q9UHH9 426 aa2.99□□□□□ -1.93
RNF111-211ENST00000560952 ODF2LQ9ULJ1 636 aa2.99□□□□□ -1.93
RNF111-211ENST00000560952 TMCC3Q9ULS5 477 aa2.99□□□□□ -1.93
RNF111-211ENST00000560952 EPB41L3Q9Y2J2 1087 aaPredicted RBP2.99□□□□□ -1.93
RNF111-211ENST00000560952 EID1Q9Y6B2 187 aa2.99□□□□□ -1.93
RNF111-211ENST00000560952 PABPN1LA6NDY0 278 aaKnown RBP2.99□□□□□ -1.93
RNF111-211ENST00000560952 LRRC10BA6NIK2 292 aa2.99□□□□□ -1.93
RNF111-211ENST00000560952 GUCY2CP25092 1073 aa2.99□□□□□ -1.93
RNF111-211ENST00000560952 KRTAP5-9P26371 169 aa2.99□□□□□ -1.93
RNF111-211ENST00000560952 KIR2DL1P43626 348 aaPredicted RBP2.99□□□□□ -1.93
RNF111-211ENST00000560952 KIR2DL2P43627 348 aaPredicted RBP2.99□□□□□ -1.93
RNF111-211ENST00000560952 SOX9P48436 509 aa2.99□□□□□ -1.93
RNF111-211ENST00000560952 KIAA2012Q0VF49 1180 aa2.99□□□□□ -1.93
RNF111-211ENST00000560952 PAK2Q13177 524 aa2.99□□□□□ -1.93
RNF111-211ENST00000560952 GNL2Q13823 731 aaKnown RBP2.99□□□□□ -1.93
RNF111-211ENST00000560952 SEPT2Q15019 361 aa2.99□□□□□ -1.93
RNF111-211ENST00000560952 ANKRD39Q53RE8 183 aa2.99□□□□□ -1.93
RNF111-211ENST00000560952 UTP14CQ5TAP6 766 aaKnown RBP2.99□□□□□ -1.93
RNF111-211ENST00000560952 FBXW10Q5XX13 1052 aa2.99□□□□□ -1.93
RNF111-211ENST00000560952 PDXDC1Q6P996 788 aa2.99□□□□□ -1.93
RNF111-211ENST00000560952 LCA5Q86VQ0 697 aa2.99□□□□□ -1.93
RNF111-211ENST00000560952 VPS37DQ86XT2 251 aa2.99□□□□□ -1.93
RNF111-211ENST00000560952 CCDC144CPQ8IYA2 1237 aa2.99□□□□□ -1.93
RNF111-211ENST00000560952 SMAP1Q8IYB5 467 aaPredicted RBP2.99□□□□□ -1.93
RNF111-211ENST00000560952 C19orf47Q8N9M1 422 aaKnown RBP2.99□□□□□ -1.93
RNF111-211ENST00000560952 LINC00116Q8NCU8 138 aa2.99□□□□□ -1.93
RNF111-211ENST00000560952 SEC16BQ96JE7 1060 aa2.99□□□□□ -1.93
RNF111-211ENST00000560952 HDAC8Q9BY41 377 aa2.99□□□□□ -1.93
RNF111-211ENST00000560952 PDGFDQ9GZP0 370 aaPredicted RBP2.99□□□□□ -1.93
RNF111-211ENST00000560952 SLC6A17Q9H1V8 727 aa2.99□□□□□ -1.93
RNF111-211ENST00000560952 CCSER2Q9H7U1 834 aa2.99□□□□□ -1.93
RNF111-211ENST00000560952 PPCSQ9HAB8 311 aa2.99□□□□□ -1.93
RNF111-211ENST00000560952 CD248Q9HCU0 757 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms