RNA–Protein interactions for RNA: ENST00000550841.1

NEK3-202, Transcript of NIMA related kinase 3, humanhuman

TSL 4

Gene NEK3, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-202ENST00000550841 SYNGAP1Q96PV0 1343 aa24.6■■□□□ 1.53
NEK3-202ENST00000550841 SPDYE3A6NKU9 549 aa24.59■■□□□ 1.53
NEK3-202ENST00000550841 ELNP15502 786 aa24.59■■□□□ 1.53
NEK3-202ENST00000550841 ALDH5A1P51649 535 aaPredicted RBP24.59■■□□□ 1.53
NEK3-202ENST00000550841 UBXN2AP68543 259 aa24.59■■□□□ 1.53
NEK3-202ENST00000550841 TRIB2Q92519 343 aa24.59■■□□□ 1.53
NEK3-202ENST00000550841 AIFM3Q96NN9 605 aa24.59■■□□□ 1.53
NEK3-202ENST00000550841 PLXNA1Q9UIW2 1896 aa24.59■■□□□ 1.53
NEK3-202ENST00000550841 TNRC18O15417 2968 aaPredicted RBP24.58■■□□□ 1.53
NEK3-202ENST00000550841 FLRT1Q9NZU1 646 aa24.58■■□□□ 1.53
NEK3-202ENST00000550841 COL20A1Q9P218 1284 aa24.58■■□□□ 1.53
NEK3-202ENST00000550841 NRBP1Q9UHY1 535 aa24.58■■□□□ 1.53
NEK3-202ENST00000550841 PCDHA4Q9UN74 947 aa24.58■■□□□ 1.53
NEK3-202ENST00000550841 RBBP6Q7Z6E9 1792 aaKnown RBP24.57■■□□□ 1.52
NEK3-202ENST00000550841 IGHA2P01877 340 aa24.57■■□□□ 1.52
NEK3-202ENST00000550841 AP3B2Q13367 1082 aa24.57■■□□□ 1.52
NEK3-202ENST00000550841 BECN1Q14457 450 aa24.57■■□□□ 1.52
NEK3-202ENST00000550841 FGD4Q96M96 766 aa24.57■■□□□ 1.52
NEK3-202ENST00000550841 PURBQ96QR8 312 aaKnown RBP24.57■■□□□ 1.52
NEK3-202ENST00000550841 PHF20Q9BVI0 1012 aa24.57■■□□□ 1.52
NEK3-202ENST00000550841 BRMS1Q9HCU9 246 aa24.57■■□□□ 1.52
NEK3-202ENST00000550841 PXMP2Q9NR77 195 aa24.57■■□□□ 1.52
NEK3-202ENST00000550841 CNPY2Q9Y2B0 182 aa24.57■■□□□ 1.52
NEK3-202ENST00000550841 DTNBO60941 627 aa24.56■■□□□ 1.52
NEK3-202ENST00000550841 PDE4DQ08499 809 aa24.56■■□□□ 1.52
NEK3-202ENST00000550841 UBE2SQ16763 222 aa24.56■■□□□ 1.52
NEK3-202ENST00000550841 ARMCX2Q7L311 632 aa24.56■■□□□ 1.52
NEK3-202ENST00000550841 REXO1Q8N1G1 1221 aaKnown RBP24.56■■□□□ 1.52
NEK3-202ENST00000550841 DAGLBQ8NCG7 672 aa24.56■■□□□ 1.52
NEK3-202ENST00000550841 MORC4Q8TE76 937 aa24.56■■□□□ 1.52
NEK3-202ENST00000550841 C8orf76Q96K31 380 aa24.56■■□□□ 1.52
NEK3-202ENST00000550841 PCDHA6Q9UN73 950 aa24.56■■□□□ 1.52
NEK3-202ENST00000550841 PCDHA8Q9Y5H6 950 aa24.56■■□□□ 1.52
NEK3-202ENST00000550841 INHAP05111 366 aa24.55■■□□□ 1.52
NEK3-202ENST00000550841 HSP90AA1P07900 732 aaKnown RBP24.55■■□□□ 1.52
NEK3-202ENST00000550841 GJB2P29033 226 aa24.55■■□□□ 1.52
NEK3-202ENST00000550841 CLK2P49760 499 aaKnown RBP24.55■■□□□ 1.52
NEK3-202ENST00000550841 BLIDQ8IZY5 108 aa24.55■■□□□ 1.52
NEK3-202ENST00000550841 SH3TC2Q8TF17 1288 aa24.55■■□□□ 1.52
NEK3-202ENST00000550841 ABHD16BQ9H3Z7 469 aa24.55■■□□□ 1.52
NEK3-202ENST00000550841 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.55■■□□□ 1.52
NEK3-202ENST00000550841 POTEFA5A3E0 1075 aa24.54■■□□□ 1.52
NEK3-202ENST00000550841 NR3C2P08235 984 aa24.54■■□□□ 1.52
NEK3-202ENST00000550841 EIF2AK2P19525 551 aaKnown RBP24.54■■□□□ 1.52
NEK3-202ENST00000550841 CYP2C19P33261 490 aa24.54■■□□□ 1.52
NEK3-202ENST00000550841 SAFBQ15424 915 aaKnown RBP eCLIP24.54■■□□□ 1.52
NEK3-202ENST00000550841 STXBP2Q15833 593 aa24.54■■□□□ 1.52
NEK3-202ENST00000550841 XRRA1Q6P2D8 792 aa24.54■■□□□ 1.52
NEK3-202ENST00000550841 ARMC5Q96C12 935 aa24.54■■□□□ 1.52
NEK3-202ENST00000550841 PDCD2LQ9BRP1 358 aa24.54■■□□□ 1.52
NEK3-202ENST00000550841 KCNJ14Q9UNX9 436 aa24.54■■□□□ 1.52
NEK3-202ENST00000550841 SNAI1O95863 264 aaPredicted RBP24.53■■□□□ 1.52
NEK3-202ENST00000550841 EDNRBP24530 442 aa24.53■■□□□ 1.52
NEK3-202ENST00000550841 CACNB2Q08289 660 aaPredicted RBP24.53■■□□□ 1.52
NEK3-202ENST00000550841 JAKMIP3Q5VZ66 844 aa24.53■■□□□ 1.52
NEK3-202ENST00000550841 KRT40Q6A162 431 aa24.53■■□□□ 1.52
NEK3-202ENST00000550841 SHISA4Q96DD7 197 aa24.53■■□□□ 1.52
NEK3-202ENST00000550841 TMEM106CQ9BVX2 250 aa24.53■■□□□ 1.52
NEK3-202ENST00000550841 ASTN1O14525 1302 aa24.53■■□□□ 1.52
NEK3-202ENST00000550841 EIF3JO75822 258 aaKnown RBP24.52■■□□□ 1.52
NEK3-202ENST00000550841 STAM2O75886 525 aa24.52■■□□□ 1.52
NEK3-202ENST00000550841 PRKAR2AP13861 404 aaKnown RBP24.52■■□□□ 1.52
NEK3-202ENST00000550841 CCND2P30279 289 aa24.52■■□□□ 1.52
NEK3-202ENST00000550841 PGM5Q15124 567 aa24.52■■□□□ 1.52
NEK3-202ENST00000550841 MAP3K21Q5TCX8 1036 aa24.52■■□□□ 1.52
NEK3-202ENST00000550841 VSIG10LQ86VR7 867 aa24.52■■□□□ 1.52
NEK3-202ENST00000550841 FBXO18Q8NFZ0 1043 aa24.52■■□□□ 1.52
NEK3-202ENST00000550841 HMX1Q9NP08 348 aaPredicted RBP24.52■■□□□ 1.52
NEK3-202ENST00000550841 VTA1Q9NP79 307 aa24.52■■□□□ 1.52
NEK3-202ENST00000550841 FRMPD4Q14CM0 1322 aa24.52■■□□□ 1.52
NEK3-202ENST00000550841 RPTORQ8N122 1335 aa24.52■■□□□ 1.52
NEK3-202ENST00000550841 MMP1P03956 469 aa24.51■■□□□ 1.51
NEK3-202ENST00000550841 PDCP20941 246 aa24.51■■□□□ 1.51
NEK3-202ENST00000550841 KRT2P35908 639 aa24.51■■□□□ 1.51
NEK3-202ENST00000550841 ACVR2BQ13705 512 aa24.51■■□□□ 1.51
NEK3-202ENST00000550841 ANO3Q9BYT9 981 aa24.51■■□□□ 1.51
NEK3-202ENST00000550841 TMEM260Q9NX78 707 aa24.51■■□□□ 1.51
NEK3-202ENST00000550841 PDE4DIPQ5VU43 2346 aa24.5■■□□□ 1.51
NEK3-202ENST00000550841 MYCLP12524 364 aaPredicted RBP24.5■■□□□ 1.51
NEK3-202ENST00000550841 TRIM32Q13049 653 aa24.5■■□□□ 1.51
NEK3-202ENST00000550841 PCNX4Q63HM2 1172 aa24.5■■□□□ 1.51
NEK3-202ENST00000550841 LARP1BQ659C4 914 aaKnown RBP24.5■■□□□ 1.51
NEK3-202ENST00000550841 KRT25Q7Z3Z0 450 aa24.5■■□□□ 1.51
NEK3-202ENST00000550841 ZNF333Q96JL9 665 aa24.5■■□□□ 1.51
NEK3-202ENST00000550841 GJB4Q9NTQ9 266 aa24.5■■□□□ 1.51
NEK3-202ENST00000550841 LCTP09848 1927 aa24.5■■□□□ 1.51
NEK3-202ENST00000550841 CYBAP13498 195 aa24.49■■□□□ 1.51
NEK3-202ENST00000550841 FOSBP53539 338 aa24.49■■□□□ 1.51
NEK3-202ENST00000550841 NPY5RQ15761 445 aa24.49■■□□□ 1.51
NEK3-202ENST00000550841 PRAMEF19Q5SWL8 479 aa24.49■■□□□ 1.51
NEK3-202ENST00000550841 PCDH10Q9P2E7 1040 aa24.49■■□□□ 1.51
NEK3-202ENST00000550841 FAM184BQ9ULE4 1060 aa24.49■■□□□ 1.51
NEK3-202ENST00000550841 CCDC194A0A1B0GVG4 234 aa24.48■■□□□ 1.51
NEK3-202ENST00000550841 H3BQV1 296 aa24.48■■□□□ 1.51
NEK3-202ENST00000550841 M0R2N6 131 aa24.48■■□□□ 1.51
NEK3-202ENST00000550841 CNGA1P29973 690 aa24.48■■□□□ 1.51
NEK3-202ENST00000550841 SREBF1P36956 1147 aa24.48■■□□□ 1.51
NEK3-202ENST00000550841 IQSEC1Q6DN90 963 aa24.48■■□□□ 1.51
NEK3-202ENST00000550841 ZHX1Q9UKY1 873 aaPredicted RBP24.48■■□□□ 1.51
NEK3-202ENST00000550841 MSCO60682 206 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 250.8 ms