RNA–Protein interactions for RNA: ENST00000546735.5

TROAP-203, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 1,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-203ENST00000546735 PSRC1Q6PGN9 363 aaPredicted RBP16.7■□□□□ 0.26
TROAP-203ENST00000546735 FBXO11Q86XK2 927 aa16.7■□□□□ 0.26
TROAP-203ENST00000546735 MAFAQ8NHW3 353 aaPredicted RBP16.7■□□□□ 0.26
TROAP-203ENST00000546735 SCFD2Q8WU76 684 aa16.7■□□□□ 0.26
TROAP-203ENST00000546735 SCLYQ96I15 445 aa16.7■□□□□ 0.26
TROAP-203ENST00000546735 MTG1Q9BT17 334 aaPredicted RBP16.7■□□□□ 0.26
TROAP-203ENST00000546735 GPHNQ9NQX3 736 aaPredicted RBP16.7■□□□□ 0.26
TROAP-203ENST00000546735 CXXC1Q9P0U4 656 aaPredicted RBP16.7■□□□□ 0.26
TROAP-203ENST00000546735 LAMA2P24043 3122 aaKnown RBP16.7■□□□□ 0.26
TROAP-203ENST00000546735 RAD50Q92878 1312 aa16.7■□□□□ 0.26
TROAP-203ENST00000546735 NKRFO15226 690 aaKnown RBP eCLIP16.69■□□□□ 0.26
TROAP-203ENST00000546735 CYP21A2P08686 494 aa16.69■□□□□ 0.26
TROAP-203ENST00000546735 FAM47CQ5HY64 1035 aa16.69■□□□□ 0.26
TROAP-203ENST00000546735 SEPT14Q6ZU15 432 aa16.69■□□□□ 0.26
TROAP-203ENST00000546735 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.69■□□□□ 0.26
TROAP-203ENST00000546735 TIFAQ96CG3 184 aa16.69■□□□□ 0.26
TROAP-203ENST00000546735 PBX4Q9BYU1 374 aa16.69■□□□□ 0.26
TROAP-203ENST00000546735 SENP2Q9HC62 589 aa16.69■□□□□ 0.26
TROAP-203ENST00000546735 MRPL11Q9Y3B7 192 aaKnown RBP16.69■□□□□ 0.26
TROAP-203ENST00000546735 CDH23Q9H251 3354 aa16.68■□□□□ 0.26
TROAP-203ENST00000546735 TMEM265A0A087WTH1 108 aa16.68■□□□□ 0.26
TROAP-203ENST00000546735 A6NJR5 290 aa16.68■□□□□ 0.26
TROAP-203ENST00000546735 B4DLN1 442 aa16.68■□□□□ 0.26
TROAP-203ENST00000546735 PPP1R11O60927 126 aaPredicted RBP16.68■□□□□ 0.26
TROAP-203ENST00000546735 CFBP00751 764 aa16.68■□□□□ 0.26
TROAP-203ENST00000546735 FGBP02675 491 aa16.68■□□□□ 0.26
TROAP-203ENST00000546735 FOSL2P15408 326 aa16.68■□□□□ 0.26
TROAP-203ENST00000546735 EIF2AK2P19525 551 aaKnown RBP16.68■□□□□ 0.26
TROAP-203ENST00000546735 MRPL12P52815 198 aaKnown RBP16.68■□□□□ 0.26
TROAP-203ENST00000546735 CHMP4BP1P59074 171 aa16.68■□□□□ 0.26
TROAP-203ENST00000546735 TTLL4Q14679 1199 aa16.68■□□□□ 0.26
TROAP-203ENST00000546735 LY6KQ17RY6 165 aa16.68■□□□□ 0.26
TROAP-203ENST00000546735 NBPF20Q3BBV1 942 aa16.68■□□□□ 0.26
TROAP-203ENST00000546735 CHST3Q7LGC8 479 aa16.68■□□□□ 0.26
TROAP-203ENST00000546735 OTOP2Q7RTS6 562 aa16.68■□□□□ 0.26
TROAP-203ENST00000546735 MCF2L2Q86YR7 1114 aa16.68■□□□□ 0.26
TROAP-203ENST00000546735 RMDN3Q96TC7 470 aa16.68■□□□□ 0.26
TROAP-203ENST00000546735 SEZ6LQ9BYH1 1024 aa16.68■□□□□ 0.26
TROAP-203ENST00000546735 MAD2L2Q9UI95 211 aa16.68■□□□□ 0.26
TROAP-203ENST00000546735 KLRF2D3W0D1 207 aa16.67■□□□□ 0.26
TROAP-203ENST00000546735 OPLAHO14841 1288 aa16.67■□□□□ 0.26
TROAP-203ENST00000546735 TRDNQ13061 729 aa16.67■□□□□ 0.26
TROAP-203ENST00000546735 SLC35G1Q2M3R5 365 aa16.67■□□□□ 0.26
TROAP-203ENST00000546735 BRDTQ58F21 947 aaPredicted RBP16.67■□□□□ 0.26
TROAP-203ENST00000546735 CCDC62Q6P9F0 684 aa16.67■□□□□ 0.26
TROAP-203ENST00000546735 NSUN6Q8TEA1 469 aaKnown RBP16.67■□□□□ 0.26
TROAP-203ENST00000546735 RUFY2Q8WXA3 655 aa16.67■□□□□ 0.26
TROAP-203ENST00000546735 HERVK_113Q902F9 699 aa16.67■□□□□ 0.26
TROAP-203ENST00000546735 VWCEQ96DN2 955 aa16.67■□□□□ 0.26
TROAP-203ENST00000546735 AMNQ9BXJ7 453 aa16.67■□□□□ 0.26
TROAP-203ENST00000546735 ZNF576Q9H609 170 aa16.67■□□□□ 0.26
TROAP-203ENST00000546735 PALM3A6NDB9 673 aaPredicted RBP16.66■□□□□ 0.26
TROAP-203ENST00000546735 IFIT3O14879 490 aaKnown RBP16.66■□□□□ 0.26
TROAP-203ENST00000546735 STXBP2Q15833 593 aa16.66■□□□□ 0.26
TROAP-203ENST00000546735 ARHGEF16Q5VV41 709 aa16.66■□□□□ 0.26
TROAP-203ENST00000546735 STOX1Q6ZVD7 989 aa16.66■□□□□ 0.26
TROAP-203ENST00000546735 HOMER1Q86YM7 354 aa16.66■□□□□ 0.26
TROAP-203ENST00000546735 AFG1LQ8WV93 481 aa16.66■□□□□ 0.26
TROAP-203ENST00000546735 U3KPZ7 1027 aaPredicted RBP16.66■□□□□ 0.26
TROAP-203ENST00000546735 E7EWF7 191 aa16.65■□□□□ 0.26
TROAP-203ENST00000546735 ZBTB5O15062 677 aa16.65■□□□□ 0.26
TROAP-203ENST00000546735 SGSM2O43147 1006 aa16.65■□□□□ 0.26
TROAP-203ENST00000546735 SUPT20HL2P0C7V6 817 aa16.65■□□□□ 0.26
TROAP-203ENST00000546735 ARHGAP1Q07960 439 aa16.65■□□□□ 0.26
TROAP-203ENST00000546735 MTMR8Q96EF0 704 aa16.65■□□□□ 0.26
TROAP-203ENST00000546735 PIGSQ96S52 555 aa16.65■□□□□ 0.26
TROAP-203ENST00000546735 PXMP2Q9NR77 195 aa16.65■□□□□ 0.26
TROAP-203ENST00000546735 KPNA6O60684 536 aa16.64■□□□□ 0.25
TROAP-203ENST00000546735 GH1P01241 217 aa16.64■□□□□ 0.25
TROAP-203ENST00000546735 NR3C2P08235 984 aa16.64■□□□□ 0.25
TROAP-203ENST00000546735 MMP3P08254 477 aa16.64■□□□□ 0.25
TROAP-203ENST00000546735 HOXA13P31271 388 aaPredicted RBP16.64■□□□□ 0.25
TROAP-203ENST00000546735 HSD17B4P51659 736 aa16.64■□□□□ 0.25
TROAP-203ENST00000546735 GRM4Q14833 912 aa16.64■□□□□ 0.25
TROAP-203ENST00000546735 DEFB128Q7Z7B8 93 aa16.64■□□□□ 0.25
TROAP-203ENST00000546735 RALYLQ86SE5 291 aaKnown RBP16.64■□□□□ 0.25
TROAP-203ENST00000546735 ZFP91Q96JP5 570 aaPredicted RBP16.64■□□□□ 0.25
TROAP-203ENST00000546735 IWS1Q96ST2 819 aa16.64■□□□□ 0.25
TROAP-203ENST00000546735 COL25A1Q9BXS0 654 aaPredicted RBP16.64■□□□□ 0.25
TROAP-203ENST00000546735 MAF1Q9H063 256 aa16.64■□□□□ 0.25
TROAP-203ENST00000546735 NKX2-4Q9H2Z4 354 aa16.64■□□□□ 0.25
TROAP-203ENST00000546735 DDX41Q9UJV9 622 aaKnown RBP16.64■□□□□ 0.25
TROAP-203ENST00000546735 YBX2Q9Y2T7 364 aaKnown RBP16.64■□□□□ 0.25
TROAP-203ENST00000546735 PCDHA1Q9Y5I3 950 aa16.64■□□□□ 0.25
TROAP-203ENST00000546735 ERICH2A1L162 156 aa16.63■□□□□ 0.25
TROAP-203ENST00000546735 ZBBXA8MT70 800 aa16.63■□□□□ 0.25
TROAP-203ENST00000546735 RBAK-RBAKDNI3L0D1 243 aa16.63■□□□□ 0.25
TROAP-203ENST00000546735 CYTH3O43739 400 aa16.63■□□□□ 0.25
TROAP-203ENST00000546735 SORBS3O60504 671 aa16.63■□□□□ 0.25
TROAP-203ENST00000546735 MYCLP12524 364 aaPredicted RBP16.63■□□□□ 0.25
TROAP-203ENST00000546735 RABGGTBP53611 331 aa16.63■□□□□ 0.25
TROAP-203ENST00000546735 ANTXR2P58335 489 aa16.63■□□□□ 0.25
TROAP-203ENST00000546735 WTAPQ15007 396 aa16.63■□□□□ 0.25
TROAP-203ENST00000546735 NFRKBQ6P4R8 1299 aa16.63■□□□□ 0.25
TROAP-203ENST00000546735 RPUSD2Q8IZ73 545 aaKnown RBP16.63■□□□□ 0.25
TROAP-203ENST00000546735 NCOA7Q8NI08 942 aa16.63■□□□□ 0.25
TROAP-203ENST00000546735 PIBF1Q8WXW3 757 aa16.63■□□□□ 0.25
TROAP-203ENST00000546735 MTIF3Q9H2K0 278 aaKnown RBP16.63■□□□□ 0.25
TROAP-203ENST00000546735 PRDM12Q9H4Q4 367 aa16.63■□□□□ 0.25
TROAP-203ENST00000546735 EIF3JO75822 258 aaKnown RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms