RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 RNF216Q9NWF9 866 aaPredicted RBP16.51■□□□□ 0.23
DDX55-209ENST00000542286 EFCAB8A8MWE9 144 aa16.5■□□□□ 0.23
DDX55-209ENST00000542286 H7C1D1 291 aa16.5■□□□□ 0.23
DDX55-209ENST00000542286 ARHGAP25P42331 645 aa16.5■□□□□ 0.23
DDX55-209ENST00000542286 GALNT17Q6IS24 598 aa16.5■□□□□ 0.23
DDX55-209ENST00000542286 SLC30A10Q6XR72 485 aa16.5■□□□□ 0.23
DDX55-209ENST00000542286 ZSCAN29Q8IWY8 852 aaPredicted RBP16.5■□□□□ 0.23
DDX55-209ENST00000542286 CNOT6LQ96LI5 555 aaKnown RBP16.5■□□□□ 0.23
DDX55-209ENST00000542286 TUBGCP2Q9BSJ2 902 aa16.5■□□□□ 0.23
DDX55-209ENST00000542286 HDAC6Q9UBN7 1215 aa16.5■□□□□ 0.23
DDX55-209ENST00000542286 KIF4BQ2VIQ3 1234 aa16.5■□□□□ 0.23
DDX55-209ENST00000542286 WDR59Q6PJI9 974 aa16.5■□□□□ 0.23
DDX55-209ENST00000542286 ANKRD20A12PQ8NF67 263 aa16.5■□□□□ 0.23
DDX55-209ENST00000542286 FGFBP2Q9BYJ0 223 aa16.5■□□□□ 0.23
DDX55-209ENST00000542286 TPM1P09493 284 aa16.49■□□□□ 0.23
DDX55-209ENST00000542286 ZNF543Q08ER8 600 aa16.49■□□□□ 0.23
DDX55-209ENST00000542286 CT47A1Q5JQC4 288 aaPredicted RBP16.49■□□□□ 0.23
DDX55-209ENST00000542286 ZNF507Q8TCN5 953 aa16.49■□□□□ 0.23
DDX55-209ENST00000542286 SNX29Q8TEQ0 813 aa16.49■□□□□ 0.23
DDX55-209ENST00000542286 MTMR9Q96QG7 549 aa16.49■□□□□ 0.23
DDX55-209ENST00000542286 COA1Q9GZY4 146 aa16.49■□□□□ 0.23
DDX55-209ENST00000542286 NPHP3-ACAD11A0A0J9YXS1 232 aa16.49■□□□□ 0.23
DDX55-209ENST00000542286 LGALS16A8MUM7 142 aa16.49■□□□□ 0.23
DDX55-209ENST00000542286 EPHB6O15197 1021 aa16.49■□□□□ 0.23
DDX55-209ENST00000542286 KIF5CO60282 957 aa16.49■□□□□ 0.23
DDX55-209ENST00000542286 TTLL1O95922 423 aa16.49■□□□□ 0.23
DDX55-209ENST00000542286 PLEKP08567 350 aaPredicted RBP16.49■□□□□ 0.23
DDX55-209ENST00000542286 PRPHP41219 470 aa16.49■□□□□ 0.23
DDX55-209ENST00000542286 MTIF2P46199 727 aaKnown RBP16.49■□□□□ 0.23
DDX55-209ENST00000542286 GYS2P54840 703 aa16.49■□□□□ 0.23
DDX55-209ENST00000542286 CYP27A1Q02318 531 aa16.49■□□□□ 0.23
DDX55-209ENST00000542286 CC2D1AQ6P1N0 951 aaPredicted RBP16.49■□□□□ 0.23
DDX55-209ENST00000542286 SLF2Q8IX21 1173 aa16.49■□□□□ 0.23
DDX55-209ENST00000542286 P2RX5Q93086 422 aa16.49■□□□□ 0.23
DDX55-209ENST00000542286 PYM1Q9BRP8 204 aaKnown RBP16.49■□□□□ 0.23
DDX55-209ENST00000542286 DUSP10Q9Y6W6 482 aa16.49■□□□□ 0.23
DDX55-209ENST00000542286 STAT3P40763 770 aa16.49■□□□□ 0.23
DDX55-209ENST00000542286 KCNB1Q14721 858 aa16.49■□□□□ 0.23
DDX55-209ENST00000542286 ITIH6Q6UXX5 1313 aa16.48■□□□□ 0.23
DDX55-209ENST00000542286 IGKV6D-41A0A0C4DH26 115 aa16.48■□□□□ 0.23
DDX55-209ENST00000542286 RCCD1A6NED2 376 aa16.48■□□□□ 0.23
DDX55-209ENST00000542286 CHRNA5P30532 468 aa16.48■□□□□ 0.23
DDX55-209ENST00000542286 SPAG1Q07617 926 aa16.48■□□□□ 0.23
DDX55-209ENST00000542286 NCAPH2Q6IBW4 605 aa16.48■□□□□ 0.23
DDX55-209ENST00000542286 CWC15Q9P013 229 aaKnown RBP16.48■□□□□ 0.23
DDX55-209ENST00000542286 MAGEC2Q9UBF1 373 aaPredicted RBP16.48■□□□□ 0.23
DDX55-209ENST00000542286 SRGAP2O75044 1071 aa16.48■□□□□ 0.23
DDX55-209ENST00000542286 TRIM21P19474 475 aaKnown RBP16.48■□□□□ 0.23
DDX55-209ENST00000542286 CRKP46108 304 aa16.48■□□□□ 0.23
DDX55-209ENST00000542286 JAG1P78504 1218 aa16.48■□□□□ 0.23
DDX55-209ENST00000542286 TBC1D8BQ0IIM8 1120 aa16.48■□□□□ 0.23
DDX55-209ENST00000542286 STIM1Q13586 685 aa16.48■□□□□ 0.23
DDX55-209ENST00000542286 HAS1Q92839 578 aa16.48■□□□□ 0.23
DDX55-209ENST00000542286 CALML4Q96GE6 196 aa16.48■□□□□ 0.23
DDX55-209ENST00000542286 CDK5RAP3Q96JB5 506 aa16.48■□□□□ 0.23
DDX55-209ENST00000542286 P2RX7Q99572 595 aaKnown RBP16.48■□□□□ 0.23
DDX55-209ENST00000542286 HINFPQ9BQA5 517 aa16.48■□□□□ 0.23
DDX55-209ENST00000542286 PARD6BQ9BYG5 372 aa16.48■□□□□ 0.23
DDX55-209ENST00000542286 LUC7L2Q9Y383 392 aaKnown RBP16.48■□□□□ 0.23
DDX55-209ENST00000542286 ANKRD31Q8N7Z5 1873 aa16.47■□□□□ 0.23
DDX55-209ENST00000542286 GOLGA6L9A6NEM1 432 aa16.47■□□□□ 0.23
DDX55-209ENST00000542286 SAMD1Q6SPF0 538 aaPredicted RBP16.47■□□□□ 0.23
DDX55-209ENST00000542286 CYP26C1Q6V0L0 522 aa16.47■□□□□ 0.23
DDX55-209ENST00000542286 SH3BP5LQ7L8J4 393 aa16.47■□□□□ 0.23
DDX55-209ENST00000542286 KRT26Q7Z3Y9 468 aa16.47■□□□□ 0.23
DDX55-209ENST00000542286 EPN1Q9Y6I3 576 aaPredicted RBP16.47■□□□□ 0.23
DDX55-209ENST00000542286 KLRG2A4D1S0 409 aaPredicted RBP16.47■□□□□ 0.23
DDX55-209ENST00000542286 LAD1O00515 517 aa16.47■□□□□ 0.23
DDX55-209ENST00000542286 MARCH6O60337 910 aa16.47■□□□□ 0.23
DDX55-209ENST00000542286 NDUFA10O95299 355 aa16.47■□□□□ 0.23
DDX55-209ENST00000542286 RHOXF2BP0C7M4 288 aa16.47■□□□□ 0.23
DDX55-209ENST00000542286 EEF2P13639 858 aaKnown RBP16.47■□□□□ 0.23
DDX55-209ENST00000542286 NOP2P46087 812 aaKnown RBP16.47■□□□□ 0.23
DDX55-209ENST00000542286 NOVP48745 357 aa16.47■□□□□ 0.23
DDX55-209ENST00000542286 APBA1Q02410 837 aa16.47■□□□□ 0.23
DDX55-209ENST00000542286 USH1GQ495M9 461 aa16.47■□□□□ 0.23
DDX55-209ENST00000542286 MIIPQ5JXC2 388 aa16.47■□□□□ 0.23
DDX55-209ENST00000542286 TMTC1Q8IUR5 882 aa16.47■□□□□ 0.23
DDX55-209ENST00000542286 TEKT1Q969V4 418 aa16.47■□□□□ 0.23
DDX55-209ENST00000542286 RHOXF2Q9BQY4 288 aa16.47■□□□□ 0.23
DDX55-209ENST00000542286 NOC4LQ9BVI4 516 aaKnown RBP16.47■□□□□ 0.23
DDX55-209ENST00000542286 SUGCTQ9HAC7 445 aa16.47■□□□□ 0.23
DDX55-209ENST00000542286 FAM207AQ9NSI2 230 aaPredicted RBP16.47■□□□□ 0.23
DDX55-209ENST00000542286 E9PMD0 336 aa16.46■□□□□ 0.23
DDX55-209ENST00000542286 SNHG28P0DPA3 235 aa16.46■□□□□ 0.23
DDX55-209ENST00000542286 CCNE1P24864 410 aa16.46■□□□□ 0.23
DDX55-209ENST00000542286 HERVK_113P62684 666 aa16.46■□□□□ 0.23
DDX55-209ENST00000542286 SEPT2Q15019 361 aa16.46■□□□□ 0.23
DDX55-209ENST00000542286 SV2BQ7L1I2 683 aa16.46■□□□□ 0.23
DDX55-209ENST00000542286 SPICE1Q8N0Z3 855 aa16.46■□□□□ 0.23
DDX55-209ENST00000542286 GOLGA5Q8TBA6 731 aa16.46■□□□□ 0.23
DDX55-209ENST00000542286 LARP4BQ92615 738 aaKnown RBP16.46■□□□□ 0.23
DDX55-209ENST00000542286 C7orf25Q9BPX7 421 aa16.46■□□□□ 0.23
DDX55-209ENST00000542286 NAA15Q9BXJ9 866 aaKnown RBP16.46■□□□□ 0.23
DDX55-209ENST00000542286 BCAS3Q9H6U6 928 aa16.46■□□□□ 0.23
DDX55-209ENST00000542286 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.46■□□□□ 0.23
DDX55-209ENST00000542286 ADAM21Q9UKJ8 722 aa16.46■□□□□ 0.23
DDX55-209ENST00000542286 SMCHD1A6NHR9 2005 aa16.46■□□□□ 0.23
DDX55-209ENST00000542286 LMAN1P49257 510 aa16.46■□□□□ 0.23
DDX55-209ENST00000542286 ASPRV1Q53RT3 343 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms