RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 MSCO60682 206 aa22.34■■□□□ 1.17
DDX55-207ENST00000540763 CTDNEP1O95476 244 aa22.34■■□□□ 1.17
DDX55-207ENST00000540763 SNAI1O95863 264 aaPredicted RBP22.34■■□□□ 1.17
DDX55-207ENST00000540763 MTFR1Q15390 333 aa22.34■■□□□ 1.17
DDX55-207ENST00000540763 TYW1BQ6NUM6 668 aa22.34■■□□□ 1.17
DDX55-207ENST00000540763 NECAB1Q8N987 351 aa22.34■■□□□ 1.17
DDX55-207ENST00000540763 LLPHQ9BRT6 129 aaKnown RBP22.34■■□□□ 1.17
DDX55-207ENST00000540763 ZMYND12Q9H0C1 365 aa22.34■■□□□ 1.17
DDX55-207ENST00000540763 UNC93B1Q9H1C4 597 aa22.34■■□□□ 1.17
DDX55-207ENST00000540763 RIC8AQ9NPQ8 531 aa22.34■■□□□ 1.17
DDX55-207ENST00000540763 CENPFP49454 3210 aa22.33■■□□□ 1.17
DDX55-207ENST00000540763 ADCY7P51828 1080 aa22.33■■□□□ 1.17
DDX55-207ENST00000540763 ST3GAL1Q11201 340 aa22.33■■□□□ 1.17
DDX55-207ENST00000540763 NSUN7Q8NE18 718 aaKnown RBP22.33■■□□□ 1.17
DDX55-207ENST00000540763 SMARCC2Q8TAQ2 1214 aa22.33■■□□□ 1.17
DDX55-207ENST00000540763 WASF1Q92558 559 aa22.33■■□□□ 1.17
DDX55-207ENST00000540763 PURBQ96QR8 312 aaKnown RBP22.33■■□□□ 1.17
DDX55-207ENST00000540763 TAAR1Q96RJ0 339 aa22.33■■□□□ 1.17
DDX55-207ENST00000540763 RMDN3Q96TC7 470 aa22.33■■□□□ 1.17
DDX55-207ENST00000540763 TMEM106CQ9BVX2 250 aa22.33■■□□□ 1.17
DDX55-207ENST00000540763 RNF208Q9H0X6 261 aa22.33■■□□□ 1.17
DDX55-207ENST00000540763 PXMP2Q9NR77 195 aa22.33■■□□□ 1.17
DDX55-207ENST00000540763 SEPT4O43236 478 aa22.32■■□□□ 1.16
DDX55-207ENST00000540763 GJB1P08034 283 aa22.32■■□□□ 1.16
DDX55-207ENST00000540763 HOXA13P31271 388 aaPredicted RBP22.32■■□□□ 1.16
DDX55-207ENST00000540763 MCTP2Q6DN12 878 aa22.32■■□□□ 1.16
DDX55-207ENST00000540763 TRPV1Q8NER1 839 aa22.32■■□□□ 1.16
DDX55-207ENST00000540763 KATNBL1Q9H079 304 aa22.32■■□□□ 1.16
DDX55-207ENST00000540763 VTA1Q9NP79 307 aa22.32■■□□□ 1.16
DDX55-207ENST00000540763 SMCO2A6NFE2 343 aa22.31■■□□□ 1.16
DDX55-207ENST00000540763 ZNF865P0CJ78 1059 aaPredicted RBP22.31■■□□□ 1.16
DDX55-207ENST00000540763 GNA11P29992 359 aa22.31■■□□□ 1.16
DDX55-207ENST00000540763 CCND3P30281 292 aaPredicted RBP22.31■■□□□ 1.16
DDX55-207ENST00000540763 ACVR2BQ13705 512 aa22.31■■□□□ 1.16
DDX55-207ENST00000540763 ARHGEF16Q5VV41 709 aa22.31■■□□□ 1.16
DDX55-207ENST00000540763 C6orf50Q9HD87 102 aa22.31■■□□□ 1.16
DDX55-207ENST00000540763 CD2BP2O95400 341 aaKnown RBP22.3■■□□□ 1.16
DDX55-207ENST00000540763 AKR1A1P14550 325 aa22.3■■□□□ 1.16
DDX55-207ENST00000540763 XBP1P17861 261 aa22.3■■□□□ 1.16
DDX55-207ENST00000540763 PDE4DQ08499 809 aa22.3■■□□□ 1.16
DDX55-207ENST00000540763 AP3B2Q13367 1082 aa22.3■■□□□ 1.16
DDX55-207ENST00000540763 USP17L6PQ6QN14 398 aa22.3■■□□□ 1.16
DDX55-207ENST00000540763 CCDC83Q8IWF9 413 aa22.3■■□□□ 1.16
DDX55-207ENST00000540763 BICD2Q8TD16 824 aa22.3■■□□□ 1.16
DDX55-207ENST00000540763 PDCD2LQ9BRP1 358 aa22.3■■□□□ 1.16
DDX55-207ENST00000540763 ORC3Q9UBD5 711 aaPredicted RBP22.3■■□□□ 1.16
DDX55-207ENST00000540763 FOSP01100 380 aaPredicted RBP22.29■■□□□ 1.16
DDX55-207ENST00000540763 GJA8P48165 433 aa22.29■■□□□ 1.16
DDX55-207ENST00000540763 CLK2P49760 499 aaKnown RBP22.29■■□□□ 1.16
DDX55-207ENST00000540763 HMGN5P82970 282 aaKnown RBP22.29■■□□□ 1.16
DDX55-207ENST00000540763 PGM5Q15124 567 aa22.29■■□□□ 1.16
DDX55-207ENST00000540763 GALNT17Q6IS24 598 aa22.29■■□□□ 1.16
DDX55-207ENST00000540763 FCHSD1Q86WN1 690 aa22.29■■□□□ 1.16
DDX55-207ENST00000540763 TMX3Q96JJ7 454 aa22.29■■□□□ 1.16
DDX55-207ENST00000540763 EHMT1Q9H9B1 1298 aa22.29■■□□□ 1.16
DDX55-207ENST00000540763 VPS54Q9P1Q0 977 aa22.29■■□□□ 1.16
DDX55-207ENST00000540763 DDX20Q9UHI6 824 aaKnown RBP22.29■■□□□ 1.16
DDX55-207ENST00000540763 MKI67P46013 3256 aaKnown RBP22.29■■□□□ 1.16
DDX55-207ENST00000540763 MYH7BA7E2Y1 1941 aa22.28■■□□□ 1.16
DDX55-207ENST00000540763 SPDYE3A6NKU9 549 aa22.28■■□□□ 1.16
DDX55-207ENST00000540763 PPFIA3O75145 1194 aa22.28■■□□□ 1.16
DDX55-207ENST00000540763 STAM2O75886 525 aa22.28■■□□□ 1.16
DDX55-207ENST00000540763 NR3C2P08235 984 aa22.28■■□□□ 1.16
DDX55-207ENST00000540763 FDPSP14324 419 aaKnown RBP22.28■■□□□ 1.16
DDX55-207ENST00000540763 EIF2AK2P19525 551 aaKnown RBP22.28■■□□□ 1.16
DDX55-207ENST00000540763 EN2P19622 333 aaPredicted RBP22.28■■□□□ 1.16
DDX55-207ENST00000540763 STXBP2Q15833 593 aa22.28■■□□□ 1.16
DDX55-207ENST00000540763 PRAMEF19Q5SWL8 479 aa22.28■■□□□ 1.16
DDX55-207ENST00000540763 XRRA1Q6P2D8 792 aa22.28■■□□□ 1.16
DDX55-207ENST00000540763 DAGLBQ8NCG7 672 aa22.28■■□□□ 1.16
DDX55-207ENST00000540763 CRISPLD2Q9H0B8 497 aa22.28■■□□□ 1.16
DDX55-207ENST00000540763 ZHX1Q9UKY1 873 aaPredicted RBP22.28■■□□□ 1.16
DDX55-207ENST00000540763 FAM184BQ9ULE4 1060 aa22.28■■□□□ 1.16
DDX55-207ENST00000540763 RBM47A0AV96 593 aaKnown RBP22.27■■□□□ 1.16
DDX55-207ENST00000540763 SGPL1O95470 568 aa22.27■■□□□ 1.16
DDX55-207ENST00000540763 UBE2SQ16763 222 aa22.27■■□□□ 1.16
DDX55-207ENST00000540763 REXO1Q8N1G1 1221 aaKnown RBP22.27■■□□□ 1.16
DDX55-207ENST00000540763 U2AF1L4Q8WU68 220 aaKnown RBP22.27■■□□□ 1.16
DDX55-207ENST00000540763 SHISA4Q96DD7 197 aa22.27■■□□□ 1.16
DDX55-207ENST00000540763 EIF3JO75822 258 aaKnown RBP22.26■■□□□ 1.15
DDX55-207ENST00000540763 MYCP01106 439 aaPredicted RBP22.26■■□□□ 1.15
DDX55-207ENST00000540763 CNGA1P29973 690 aa22.26■■□□□ 1.15
DDX55-207ENST00000540763 CCND2P30279 289 aa22.26■■□□□ 1.15
DDX55-207ENST00000540763 NLRP5P59047 1200 aa22.26■■□□□ 1.15
DDX55-207ENST00000540763 PCNX4Q63HM2 1172 aa22.26■■□□□ 1.15
DDX55-207ENST00000540763 LHX8Q68G74 356 aa22.26■■□□□ 1.15
DDX55-207ENST00000540763 VSIG10LQ86VR7 867 aa22.26■■□□□ 1.15
DDX55-207ENST00000540763 FBXO16Q8IX29 292 aaPredicted RBP22.26■■□□□ 1.15
DDX55-207ENST00000540763 DEFB118Q96PH6 123 aa22.26■■□□□ 1.15
DDX55-207ENST00000540763 PCDHA6Q9UN73 950 aa22.26■■□□□ 1.15
DDX55-207ENST00000540763 PCDHA8Q9Y5H6 950 aa22.26■■□□□ 1.15
DDX55-207ENST00000540763 BRCA2P51587 3418 aa22.25■■□□□ 1.15
DDX55-207ENST00000540763 JAK2O60674 1132 aa22.25■■□□□ 1.15
DDX55-207ENST00000540763 CCDC144BQ3MJ40 725 aa22.25■■□□□ 1.15
DDX55-207ENST00000540763 IQSEC1Q6DN90 963 aa22.25■■□□□ 1.15
DDX55-207ENST00000540763 TAPT1Q6NXT6 567 aa22.25■■□□□ 1.15
DDX55-207ENST00000540763 SNX21Q969T3 373 aa22.25■■□□□ 1.15
DDX55-207ENST00000540763 AIFM3Q96NN9 605 aa22.25■■□□□ 1.15
DDX55-207ENST00000540763 ALG1Q9BT22 464 aa22.25■■□□□ 1.15
DDX55-207ENST00000540763 PHF20Q9BVI0 1012 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms