RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 SLC26A4O43511 780 aa20.03■□□□□ 0.8
GNE-204ENST00000539208 KIF5CO60282 957 aa20.03■□□□□ 0.8
GNE-204ENST00000539208 SLC1A4P43007 532 aa20.03■□□□□ 0.8
GNE-204ENST00000539208 TCP10Q12799 353 aa20.03■□□□□ 0.8
GNE-204ENST00000539208 MCM6Q14566 821 aa20.03■□□□□ 0.8
GNE-204ENST00000539208 SLFN13Q68D06 897 aa20.03■□□□□ 0.8
GNE-204ENST00000539208 MSL1Q68DK7 614 aa20.03■□□□□ 0.8
GNE-204ENST00000539208 TMEM179Q6ZVK1 233 aa20.03■□□□□ 0.8
GNE-204ENST00000539208 SLX4Q8IY92 1834 aa20.03■□□□□ 0.8
GNE-204ENST00000539208 RETREG2Q8NC44 543 aa20.03■□□□□ 0.8
GNE-204ENST00000539208 SNX29Q8TEQ0 813 aa20.03■□□□□ 0.8
GNE-204ENST00000539208 UBXN4Q92575 508 aa20.03■□□□□ 0.8
GNE-204ENST00000539208 CNKSR1Q969H4 720 aa20.03■□□□□ 0.8
GNE-204ENST00000539208 DDX41Q9UJV9 622 aaKnown RBP20.03■□□□□ 0.8
GNE-204ENST00000539208 PCDHAC2Q9Y5I4 1007 aa20.03■□□□□ 0.8
GNE-204ENST00000539208 TTC26A0AVF1 554 aa20.02■□□□□ 0.8
GNE-204ENST00000539208 POTEMA6NI47 508 aa20.02■□□□□ 0.8
GNE-204ENST00000539208 USP11P51784 963 aa20.02■□□□□ 0.8
GNE-204ENST00000539208 RBM5P52756 815 aaKnown RBP eCLIP20.02■□□□□ 0.8
GNE-204ENST00000539208 CACNB3P54284 484 aa20.02■□□□□ 0.8
GNE-204ENST00000539208 PSMD2Q13200 908 aa20.02■□□□□ 0.8
GNE-204ENST00000539208 QRICH1Q2TAL8 776 aa20.02■□□□□ 0.8
GNE-204ENST00000539208 FOXR2Q6PJQ5 311 aa20.02■□□□□ 0.8
GNE-204ENST00000539208 SIAH1Q8IUQ4 282 aa20.02■□□□□ 0.8
GNE-204ENST00000539208 ZSCAN29Q8IWY8 852 aaPredicted RBP20.02■□□□□ 0.8
GNE-204ENST00000539208 UBE2Q2Q8WVN8 375 aa20.02■□□□□ 0.8
GNE-204ENST00000539208 NUP58Q9BVL2 599 aa20.02■□□□□ 0.8
GNE-204ENST00000539208 CARD6Q9BX69 1037 aa20.02■□□□□ 0.8
GNE-204ENST00000539208 LUC7L2Q9Y383 392 aaKnown RBP20.02■□□□□ 0.8
GNE-204ENST00000539208 SLURP2P0DP57 97 aa20.02■□□□□ 0.8
GNE-204ENST00000539208 SEPT2Q15019 361 aa20.02■□□□□ 0.8
GNE-204ENST00000539208 HYIQ5T013 277 aa20.02■□□□□ 0.8
GNE-204ENST00000539208 MCTP2Q6DN12 878 aa20.02■□□□□ 0.8
GNE-204ENST00000539208 C7orf43Q8WVR3 580 aa20.02■□□□□ 0.8
GNE-204ENST00000539208 TRIM34Q9BYJ4 488 aa20.02■□□□□ 0.8
GNE-204ENST00000539208 LZTFL1Q9NQ48 299 aa20.02■□□□□ 0.8
GNE-204ENST00000539208 ATRNL1Q5VV63 1379 aa20.01■□□□□ 0.79
GNE-204ENST00000539208 CYP3A7-CYP3A51PA0A087WV96 503 aa20.01■□□□□ 0.79
GNE-204ENST00000539208 CYP3A7P24462 503 aa20.01■□□□□ 0.79
GNE-204ENST00000539208 EHHADHQ08426 723 aa20.01■□□□□ 0.79
GNE-204ENST00000539208 TUBB2AQ13885 445 aa20.01■□□□□ 0.79
GNE-204ENST00000539208 GUF1Q8N442 669 aaKnown RBP20.01■□□□□ 0.79
GNE-204ENST00000539208 GMCL1P1Q8NEA9 526 aa20.01■□□□□ 0.79
GNE-204ENST00000539208 CNOT6LQ96LI5 555 aaKnown RBP20.01■□□□□ 0.79
GNE-204ENST00000539208 NUDT12Q9BQG2 462 aa20.01■□□□□ 0.79
GNE-204ENST00000539208 TUBB2BQ9BVA1 445 aa20.01■□□□□ 0.79
GNE-204ENST00000539208 SEMA6BQ9H3T3 888 aa20.01■□□□□ 0.79
GNE-204ENST00000539208 MYO1AQ9UBC5 1043 aa20.01■□□□□ 0.79
GNE-204ENST00000539208 PCDHA1Q9Y5I3 950 aa20.01■□□□□ 0.79
GNE-204ENST00000539208 COL2A1P02458 1487 aaPredicted RBP20.01■□□□□ 0.79
GNE-204ENST00000539208 RGPD3A6NKT7 1758 aaPredicted RBP20.01■□□□□ 0.79
GNE-204ENST00000539208 RGPD4Q7Z3J3 1758 aa20.01■□□□□ 0.79
GNE-204ENST00000539208 MYH7BA7E2Y1 1941 aa20.01■□□□□ 0.79
GNE-204ENST00000539208 ENTPD3O75355 529 aa20.01■□□□□ 0.79
GNE-204ENST00000539208 PRKCSHP14314 528 aaPredicted RBP20.01■□□□□ 0.79
GNE-204ENST00000539208 MBOAT7Q96N66 472 aa20.01■□□□□ 0.79
GNE-204ENST00000539208 PCDHA12Q9UN75 941 aa20.01■□□□□ 0.79
GNE-204ENST00000539208 ABCB11O95342 1321 aa20■□□□□ 0.79
GNE-204ENST00000539208 B4DLN1 442 aa20■□□□□ 0.79
GNE-204ENST00000539208 ARHGAP29Q52LW3 1261 aa20■□□□□ 0.79
GNE-204ENST00000539208 CC2D2BQ6DHV5 1058 aa20■□□□□ 0.79
GNE-204ENST00000539208 MOXD1Q6UVY6 613 aa20■□□□□ 0.79
GNE-204ENST00000539208 IQCDQ96DY2 449 aa20■□□□□ 0.79
GNE-204ENST00000539208 GMCL1Q96IK5 515 aa20■□□□□ 0.79
GNE-204ENST00000539208 TTYH3Q9C0H2 523 aa20■□□□□ 0.79
GNE-204ENST00000539208 SLC39A2Q9NP94 309 aa20■□□□□ 0.79
GNE-204ENST00000539208 KDM3AQ9Y4C1 1321 aa20■□□□□ 0.79
GNE-204ENST00000539208 ICA1Q05084 483 aa20■□□□□ 0.79
GNE-204ENST00000539208 AP3B2Q13367 1082 aa20■□□□□ 0.79
GNE-204ENST00000539208 CDC37Q16543 378 aaPredicted RBP20■□□□□ 0.79
GNE-204ENST00000539208 FIGNQ5HY92 759 aa20■□□□□ 0.79
GNE-204ENST00000539208 ACRBPQ8NEB7 543 aa20■□□□□ 0.79
GNE-204ENST00000539208 ERGIC2Q96RQ1 377 aa20■□□□□ 0.79
GNE-204ENST00000539208 IRX2Q9BZI1 471 aaPredicted RBP20■□□□□ 0.79
GNE-204ENST00000539208 NT5C3AQ9H0P0 336 aa20■□□□□ 0.79
GNE-204ENST00000539208 EPN1Q9Y6I3 576 aaPredicted RBP20■□□□□ 0.79
GNE-204ENST00000539208 FAM196BA6NMK8 535 aa19.99■□□□□ 0.79
GNE-204ENST00000539208 FGFR1OPO95684 399 aaKnown RBP19.99■□□□□ 0.79
GNE-204ENST00000539208 PPP2R3AQ06190 1150 aa19.99■□□□□ 0.79
GNE-204ENST00000539208 TBC1D8BQ0IIM8 1120 aa19.99■□□□□ 0.79
GNE-204ENST00000539208 MEA1Q16626 185 aa19.99■□□□□ 0.79
GNE-204ENST00000539208 ABCB5Q2M3G0 1257 aa19.99■□□□□ 0.79
GNE-204ENST00000539208 TSR1Q2NL82 804 aaKnown RBP19.99■□□□□ 0.79
GNE-204ENST00000539208 MIIPQ5JXC2 388 aa19.99■□□□□ 0.79
GNE-204ENST00000539208 DDX12PQ92771 950 aa19.99■□□□□ 0.79
GNE-204ENST00000539208 SYNPO2Q9UMS6 1093 aa19.99■□□□□ 0.79
GNE-204ENST00000539208 F5H6K3 240 aa19.98■□□□□ 0.79
GNE-204ENST00000539208 PES1O00541 588 aaKnown RBP19.98■□□□□ 0.79
GNE-204ENST00000539208 NDUFA10O95299 355 aa19.98■□□□□ 0.79
GNE-204ENST00000539208 MTIF2P46199 727 aaKnown RBP19.98■□□□□ 0.79
GNE-204ENST00000539208 CBX1P83916 185 aa19.98■□□□□ 0.79
GNE-204ENST00000539208 LRRC63Q05C16 580 aa19.98■□□□□ 0.79
GNE-204ENST00000539208 KLRC3Q07444 240 aa19.98■□□□□ 0.79
GNE-204ENST00000539208 KCNK18Q7Z418 384 aa19.98■□□□□ 0.79
GNE-204ENST00000539208 SUPT20HQ8NEM7 779 aa19.98■□□□□ 0.79
GNE-204ENST00000539208 KCNMB3Q9NPA1 279 aa19.98■□□□□ 0.79
GNE-204ENST00000539208 A0A0U1RQJ8 604 aa19.98■□□□□ 0.79
GNE-204ENST00000539208 USP17L15C9J2P7 530 aa19.98■□□□□ 0.79
GNE-204ENST00000539208 USP17L13C9JLJ4 530 aa19.98■□□□□ 0.79
GNE-204ENST00000539208 USP17L11C9JVI0 530 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms