RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 TMEM31Q5JXX7 168 aa15.34■□□□□ 0.05
COPB1-209ENST00000533096 BTNL9Q6UXG8 535 aa15.34■□□□□ 0.05
COPB1-209ENST00000533096 PI4K2BQ8TCG2 481 aa15.34■□□□□ 0.05
COPB1-209ENST00000533096 AFG1LQ8WV93 481 aa15.34■□□□□ 0.05
COPB1-209ENST00000533096 CRBNQ96SW2 442 aa15.34■□□□□ 0.05
COPB1-209ENST00000533096 PARP14Q460N5 1801 aa15.33■□□□□ 0.05
COPB1-209ENST00000533096 B4DLN1 442 aa15.33■□□□□ 0.04
COPB1-209ENST00000533096 NKRFO15226 690 aaKnown RBP eCLIP15.33■□□□□ 0.04
COPB1-209ENST00000533096 GOLGA8HP0CJ92 632 aa15.33■□□□□ 0.04
COPB1-209ENST00000533096 MRPL12P52815 198 aaKnown RBP15.33■□□□□ 0.04
COPB1-209ENST00000533096 HAND2P61296 217 aa15.33■□□□□ 0.04
COPB1-209ENST00000533096 DIEXFQ68CQ4 756 aaKnown RBP15.33■□□□□ 0.04
COPB1-209ENST00000533096 TBC1D5Q92609 795 aa15.33■□□□□ 0.04
COPB1-209ENST00000533096 KHSRPQ92945 711 aaKnown RBP eCLIP15.33■□□□□ 0.048e-11■■□□□ 12.2
COPB1-209ENST00000533096 UBA5Q9GZZ9 404 aa15.33■□□□□ 0.04
COPB1-209ENST00000533096 ZBTB47Q9UFB7 747 aaPredicted RBP15.33■□□□□ 0.04
COPB1-209ENST00000533096 HCN4Q9Y3Q4 1203 aa15.33■□□□□ 0.04
COPB1-209ENST00000533096 TTC41PQ6P2S7 1318 aa15.33■□□□□ 0.04
COPB1-209ENST00000533096 PITPNM1O00562 1244 aa15.32■□□□□ 0.04
COPB1-209ENST00000533096 ARIH2O95376 493 aa15.32■□□□□ 0.04
COPB1-209ENST00000533096 FGAP02671 866 aa15.32■□□□□ 0.04
COPB1-209ENST00000533096 PTPN11Q06124 597 aaPredicted RBP15.32■□□□□ 0.04
COPB1-209ENST00000533096 GDF6Q6KF10 455 aaPredicted RBP15.32■□□□□ 0.04
COPB1-209ENST00000533096 ALG1Q9BT22 464 aa15.32■□□□□ 0.04
COPB1-209ENST00000533096 CPVLQ9H3G5 476 aa15.32■□□□□ 0.04
COPB1-209ENST00000533096 ANAPC4Q9UJX5 808 aa15.32■□□□□ 0.04
COPB1-209ENST00000533096 MYH8P13535 1937 aa15.31■□□□□ 0.04
COPB1-209ENST00000533096 ORC4O43929 436 aa15.31■□□□□ 0.04
COPB1-209ENST00000533096 LPXNO60711 386 aa15.31■□□□□ 0.04
COPB1-209ENST00000533096 MX1P20591 662 aa15.31■□□□□ 0.04
COPB1-209ENST00000533096 CASTP20810 708 aaKnown RBP15.31■□□□□ 0.04
COPB1-209ENST00000533096 WDR5P61964 334 aaKnown RBP15.31■□□□□ 0.04
COPB1-209ENST00000533096 DEFB103AP81534 67 aa15.31■□□□□ 0.04
COPB1-209ENST00000533096 CCDC155Q8N6L0 562 aa15.31■□□□□ 0.04
COPB1-209ENST00000533096 GDPD5Q8WTR4 605 aa15.31■□□□□ 0.04
COPB1-209ENST00000533096 TAAR1Q96RJ0 339 aa15.31■□□□□ 0.04
COPB1-209ENST00000533096 ZKSCAN3Q9BRR0 538 aa15.31■□□□□ 0.04
COPB1-209ENST00000533096 VAT1LQ9HCJ6 419 aa15.31■□□□□ 0.04
COPB1-209ENST00000533096 CD320Q9NPF0 282 aa15.31■□□□□ 0.04
COPB1-209ENST00000533096 LOC102724159A0A0B4J2E5 919 aa15.3■□□□□ 0.04
COPB1-209ENST00000533096 SORBS3O60504 671 aa15.3■□□□□ 0.04
COPB1-209ENST00000533096 BAIAP3O94812 1187 aa15.3■□□□□ 0.04
COPB1-209ENST00000533096 GH1P01241 217 aa15.3■□□□□ 0.04
COPB1-209ENST00000533096 PDHBP11177 359 aa15.3■□□□□ 0.04
COPB1-209ENST00000533096 SELPP16109 830 aa15.3■□□□□ 0.04
COPB1-209ENST00000533096 NOVP48745 357 aa15.3■□□□□ 0.04
COPB1-209ENST00000533096 ZNF543Q08ER8 600 aa15.3■□□□□ 0.04
COPB1-209ENST00000533096 GPNMBQ14956 572 aa15.3■□□□□ 0.04
COPB1-209ENST00000533096 PWP2Q15269 919 aaKnown RBP15.3■□□□□ 0.04
COPB1-209ENST00000533096 ANKRD45Q5TZF3 282 aa15.3■□□□□ 0.04
COPB1-209ENST00000533096 LRRC8DQ7L1W4 858 aa15.3■□□□□ 0.04
COPB1-209ENST00000533096 C7orf31Q8N865 590 aa15.3■□□□□ 0.04
COPB1-209ENST00000533096 DNERQ8NFT8 737 aa15.3■□□□□ 0.04
COPB1-209ENST00000533096 UIMC1Q96RL1 719 aa15.3■□□□□ 0.04
COPB1-209ENST00000533096 SUGCTQ9HAC7 445 aa15.3■□□□□ 0.04
COPB1-209ENST00000533096 PCDHB15Q9Y5E8 787 aa15.3■□□□□ 0.04
COPB1-209ENST00000533096 IKBKEQ14164 716 aa15.29■□□□□ 0.04
COPB1-209ENST00000533096 TCTN1Q2MV58 587 aa15.29■□□□□ 0.04
COPB1-209ENST00000533096 CCDC62Q6P9F0 684 aa15.29■□□□□ 0.04
COPB1-209ENST00000533096 MFSD6Q6ZSS7 791 aa15.29■□□□□ 0.04
COPB1-209ENST00000533096 AFAP1L1Q8TED9 768 aa15.29■□□□□ 0.04
COPB1-209ENST00000533096 FAM227BQ96M60 508 aa15.29■□□□□ 0.04
COPB1-209ENST00000533096 RAD9AQ99638 391 aa15.29■□□□□ 0.04
COPB1-209ENST00000533096 TCP11L1Q9NUJ3 509 aa15.29■□□□□ 0.04
COPB1-209ENST00000533096 HDAC6Q9UBN7 1215 aa15.29■□□□□ 0.04
COPB1-209ENST00000533096 PNMA2Q9UL42 364 aa15.29■□□□□ 0.04
COPB1-209ENST00000533096 DHX16O60231 1041 aaKnown RBP15.28■□□□□ 0.04
COPB1-209ENST00000533096 NBNO60934 754 aa15.28■□□□□ 0.04
COPB1-209ENST00000533096 MMP3P08254 477 aa15.28■□□□□ 0.04
COPB1-209ENST00000533096 FGRP09769 529 aa15.28■□□□□ 0.04
COPB1-209ENST00000533096 CKBP12277 381 aa15.28■□□□□ 0.04
COPB1-209ENST00000533096 KCNA5P22460 613 aa15.28■□□□□ 0.04
COPB1-209ENST00000533096 EDNRBP24530 442 aa15.28■□□□□ 0.04
COPB1-209ENST00000533096 SSTR3P32745 418 aaPredicted RBP15.28■□□□□ 0.04
COPB1-209ENST00000533096 ZNF200P98182 395 aaPredicted RBP15.28■□□□□ 0.04
COPB1-209ENST00000533096 ALX1Q15699 326 aa15.28■□□□□ 0.04
COPB1-209ENST00000533096 EP400NLQ6ZTU2 488 aa15.28■□□□□ 0.04
COPB1-209ENST00000533096 CAGE1Q8TC20 777 aa15.28■□□□□ 0.04
COPB1-209ENST00000533096 KAT2BQ92831 832 aa15.28■□□□□ 0.04
COPB1-209ENST00000533096 EVI5LQ96CN4 794 aa15.28■□□□□ 0.04
COPB1-209ENST00000533096 TTC14Q96N46 770 aa15.28■□□□□ 0.04
COPB1-209ENST00000533096 TGS1Q96RS0 853 aaKnown RBP15.28■□□□□ 0.04
COPB1-209ENST00000533096 HELLSQ9NRZ9 838 aa15.28■□□□□ 0.04
COPB1-209ENST00000533096 GREB1LQ9C091 1923 aaPredicted RBP15.27■□□□□ 0.04
COPB1-209ENST00000533096 HOXD11P31277 338 aaPredicted RBP15.27■□□□□ 0.04
COPB1-209ENST00000533096 PSEN2P49810 448 aa15.27■□□□□ 0.04
COPB1-209ENST00000533096 ARHGAP1Q07960 439 aa15.27■□□□□ 0.04
COPB1-209ENST00000533096 STXBP2Q15833 593 aa15.27■□□□□ 0.04
COPB1-209ENST00000533096 DGKDQ16760 1214 aa15.27■□□□□ 0.04
COPB1-209ENST00000533096 MCMDC2Q4G0Z9 681 aa15.27■□□□□ 0.04
COPB1-209ENST00000533096 ARHGEF16Q5VV41 709 aa15.27■□□□□ 0.04
COPB1-209ENST00000533096 CNKSR3Q6P9H4 555 aa15.27■□□□□ 0.04
COPB1-209ENST00000533096 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.27■□□□□ 0.046e-8■■□□□ 11.4
COPB1-209ENST00000533096 SYTL5Q8TDW5 730 aaPredicted RBP15.27■□□□□ 0.04
COPB1-209ENST00000533096 NSUN6Q8TEA1 469 aaKnown RBP15.27■□□□□ 0.04
COPB1-209ENST00000533096 DHX38Q92620 1227 aaKnown RBP15.27■□□□□ 0.04
COPB1-209ENST00000533096 CTAGE1Q96RT6 745 aa15.27■□□□□ 0.04
COPB1-209ENST00000533096 RMDN3Q96TC7 470 aa15.27■□□□□ 0.04
COPB1-209ENST00000533096 CHD9Q3L8U1 2897 aa15.27■□□□□ 0.03
COPB1-209ENST00000533096 MCM3APO60318 1980 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms