RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 RNF135Q8IUD6 432 aa20.86■□□□□ 0.93
PVT1-220ENST00000524165 PBXIP1Q96AQ6 731 aa20.86■□□□□ 0.93
PVT1-220ENST00000524165 IRF2BPLQ9H1B7 796 aa20.86■□□□□ 0.93
PVT1-220ENST00000524165 ADD3Q9UEY8 706 aaKnown RBP20.86■□□□□ 0.93
PVT1-220ENST00000524165 TMEM232C9JQI7 657 aa20.85■□□□□ 0.93
PVT1-220ENST00000524165 NBNO60934 754 aa20.85■□□□□ 0.93
PVT1-220ENST00000524165 TCTN1Q2MV58 587 aa20.85■□□□□ 0.93
PVT1-220ENST00000524165 SLFNL1Q499Z3 407 aa20.85■□□□□ 0.93
PVT1-220ENST00000524165 EPC2Q52LR7 807 aa20.85■□□□□ 0.93
PVT1-220ENST00000524165 SUGP1Q8IWZ8 645 aaKnown RBP20.85■□□□□ 0.93
PVT1-220ENST00000524165 SP7Q8TDD2 431 aaPredicted RBP20.85■□□□□ 0.93
PVT1-220ENST00000524165 CHURC1Q8WUH1 139 aa20.85■□□□□ 0.93
PVT1-220ENST00000524165 CLUAP1Q96AJ1 413 aa20.85■□□□□ 0.93
PVT1-220ENST00000524165 CTAGE1Q96RT6 745 aa20.85■□□□□ 0.93
PVT1-220ENST00000524165 NSUN3Q9H649 340 aaKnown RBP20.85■□□□□ 0.93
PVT1-220ENST00000524165 TMEM221A6NGB7 291 aa20.84■□□□□ 0.93
PVT1-220ENST00000524165 H3BNC9 293 aa20.84■□□□□ 0.93
PVT1-220ENST00000524165 M0R296 226 aa20.84■□□□□ 0.93
PVT1-220ENST00000524165 HTRA4P83105 476 aaPredicted RBP20.84■□□□□ 0.93
PVT1-220ENST00000524165 SBK1Q52WX2 424 aa20.84■□□□□ 0.93
PVT1-220ENST00000524165 MUM1L1Q5H9M0 696 aa20.84■□□□□ 0.93
PVT1-220ENST00000524165 SLFN13Q68D06 897 aa20.84■□□□□ 0.93
PVT1-220ENST00000524165 FAM117BQ6P1L5 589 aa20.84■□□□□ 0.93
PVT1-220ENST00000524165 TRIM67Q6ZTA4 783 aa20.84■□□□□ 0.93
PVT1-220ENST00000524165 SESTD1Q86VW0 696 aa20.84■□□□□ 0.93
PVT1-220ENST00000524165 LRRC47Q8N1G4 583 aaKnown RBP20.84■□□□□ 0.93
PVT1-220ENST00000524165 TMEM57Q8N5G2 664 aa20.84■□□□□ 0.93
PVT1-220ENST00000524165 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.84■□□□□ 0.93
PVT1-220ENST00000524165 C1orf115Q9H7X2 142 aa20.84■□□□□ 0.93
PVT1-220ENST00000524165 CLDND1Q9NY35 253 aa20.84■□□□□ 0.93
PVT1-220ENST00000524165 MTMR4Q9NYA4 1195 aa20.84■□□□□ 0.93
PVT1-220ENST00000524165 RIF1Q5UIP0 2472 aaKnown RBP20.84■□□□□ 0.93
PVT1-220ENST00000524165 ATG2AQ2TAZ0 1938 aa20.84■□□□□ 0.93
PVT1-220ENST00000524165 RALGAPA2Q2PPJ7 1873 aa20.84■□□□□ 0.93
PVT1-220ENST00000524165 TTLL1O95922 423 aa20.83■□□□□ 0.93
PVT1-220ENST00000524165 LTBRP36941 435 aa20.83■□□□□ 0.93
PVT1-220ENST00000524165 ALDH5A1P51649 535 aaPredicted RBP20.83■□□□□ 0.93
PVT1-220ENST00000524165 ERMP1Q7Z2K6 904 aa20.83■□□□□ 0.93
PVT1-220ENST00000524165 STAG1Q8WVM7 1258 aa20.83■□□□□ 0.93
PVT1-220ENST00000524165 CEP95Q96GE4 821 aa20.83■□□□□ 0.93
PVT1-220ENST00000524165 PLXNA3P51805 1871 aa20.82■□□□□ 0.92
PVT1-220ENST00000524165 PLA2G6O60733 806 aa20.82■□□□□ 0.92
PVT1-220ENST00000524165 CKBP12277 381 aa20.82■□□□□ 0.92
PVT1-220ENST00000524165 GPM6BQ13491 265 aa20.82■□□□□ 0.92
PVT1-220ENST00000524165 PPP2R5BQ15173 497 aa20.82■□□□□ 0.92
PVT1-220ENST00000524165 UBE3CQ15386 1083 aa20.82■□□□□ 0.92
PVT1-220ENST00000524165 NSMFQ6X4W1 530 aa20.82■□□□□ 0.92
PVT1-220ENST00000524165 DHX38Q92620 1227 aaKnown RBP20.82■□□□□ 0.92
PVT1-220ENST00000524165 FRAT1Q92837 279 aaPredicted RBP20.82■□□□□ 0.92
PVT1-220ENST00000524165 PURBQ96QR8 312 aaKnown RBP20.82■□□□□ 0.92
PVT1-220ENST00000524165 ALG13Q9NP73 1137 aaKnown RBP20.82■□□□□ 0.92
PVT1-220ENST00000524165 PAG1Q9NWQ8 432 aa20.82■□□□□ 0.92
PVT1-220ENST00000524165 FAM186AA6NE01 2351 aa20.82■□□□□ 0.92
PVT1-220ENST00000524165 COL4A6Q14031 1691 aa20.81■□□□□ 0.92
PVT1-220ENST00000524165 MBTPS2O43462 519 aa20.81■□□□□ 0.92
PVT1-220ENST00000524165 CTC1Q2NKJ3 1217 aa20.81■□□□□ 0.92
PVT1-220ENST00000524165 GDF6Q6KF10 455 aaPredicted RBP20.81■□□□□ 0.92
PVT1-220ENST00000524165 RPAINQ86UA6 219 aa20.81■□□□□ 0.92
PVT1-220ENST00000524165 FBXL6Q8N531 539 aa20.81■□□□□ 0.92
PVT1-220ENST00000524165 GMCL1Q96IK5 515 aa20.81■□□□□ 0.92
PVT1-220ENST00000524165 FAM86C1Q9NVL1 165 aa20.81■□□□□ 0.92
PVT1-220ENST00000524165 EXOC6BQ9Y2D4 811 aa20.81■□□□□ 0.92
PVT1-220ENST00000524165 MYO15AQ9UKN7 3530 aa20.81■□□□□ 0.92
PVT1-220ENST00000524165 DCHS1Q96JQ0 3298 aa20.8■□□□□ 0.92
PVT1-220ENST00000524165 IKQ13123 557 aaPredicted RBP20.8■□□□□ 0.92
PVT1-220ENST00000524165 ZNF444Q8N0Y2 327 aaPredicted RBP20.8■□□□□ 0.92
PVT1-220ENST00000524165 SCFD2Q8WU76 684 aa20.8■□□□□ 0.92
PVT1-220ENST00000524165 ZNF287Q9HBT7 754 aa20.8■□□□□ 0.92
PVT1-220ENST00000524165 IL1RAPL2Q9NP60 686 aa20.8■□□□□ 0.92
PVT1-220ENST00000524165 AMHP03971 560 aa20.79■□□□□ 0.92
PVT1-220ENST00000524165 MKRN4PQ13434 485 aaPredicted RBP20.79■□□□□ 0.92
PVT1-220ENST00000524165 GIMAP6Q6P9H5 292 aa20.79■□□□□ 0.92
PVT1-220ENST00000524165 STK11IPQ8N1F8 1099 aa20.79■□□□□ 0.92
PVT1-220ENST00000524165 ISY1Q9ULR0 285 aaKnown RBP20.79■□□□□ 0.92
PVT1-220ENST00000524165 STXBP3O00186 592 aa20.78■□□□□ 0.92
PVT1-220ENST00000524165 SLC1A4P43007 532 aa20.78■□□□□ 0.92
PVT1-220ENST00000524165 CHMP4BP1P59074 171 aa20.78■□□□□ 0.92
PVT1-220ENST00000524165 SMAD4Q13485 552 aaKnown RBP20.78■□□□□ 0.92
PVT1-220ENST00000524165 BAATQ14032 418 aaPredicted RBP20.78■□□□□ 0.92
PVT1-220ENST00000524165 HSP90AB4PQ58FF6 505 aa20.78■□□□□ 0.92
PVT1-220ENST00000524165 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.78■□□□□ 0.92
PVT1-220ENST00000524165 RHPN1Q8TCX5 695 aa20.78■□□□□ 0.92
PVT1-220ENST00000524165 CCPG1Q9ULG6 757 aa20.78■□□□□ 0.92
PVT1-220ENST00000524165 PLIN4Q96Q06 1357 aa20.77■□□□□ 0.92
PVT1-220ENST00000524165 PROB1E7EW31 1015 aa20.77■□□□□ 0.92
PVT1-220ENST00000524165 ZXDAP98168 799 aa20.77■□□□□ 0.92
PVT1-220ENST00000524165 FBXO11Q86XK2 927 aa20.77■□□□□ 0.92
PVT1-220ENST00000524165 TMEM192Q8IY95 271 aa20.77■□□□□ 0.92
PVT1-220ENST00000524165 CLASRPQ8N2M8 674 aaKnown RBP20.77■□□□□ 0.92
PVT1-220ENST00000524165 ATOH1Q92858 354 aaPredicted RBP20.77■□□□□ 0.92
PVT1-220ENST00000524165 COPS5Q92905 334 aa20.77■□□□□ 0.92
PVT1-220ENST00000524165 PUS7LQ9H0K6 701 aaKnown RBP20.77■□□□□ 0.92
PVT1-220ENST00000524165 MINDY4BA8MYZ0 360 aa20.76■□□□□ 0.91
PVT1-220ENST00000524165 LGR5O75473 907 aa20.76■□□□□ 0.91
PVT1-220ENST00000524165 CHGBP05060 677 aa20.76■□□□□ 0.91
PVT1-220ENST00000524165 ICAM1P05362 532 aa20.76■□□□□ 0.91
PVT1-220ENST00000524165 DLX2Q07687 328 aaPredicted RBP20.76■□□□□ 0.91
PVT1-220ENST00000524165 TRAF7Q6Q0C0 670 aa20.76■□□□□ 0.91
PVT1-220ENST00000524165 MYOCDQ8IZQ8 938 aa20.76■□□□□ 0.91
PVT1-220ENST00000524165 MPHOSPH6Q99547 160 aaKnown RBP20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms