RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 LCP1P13796 627 aa5.51□□□□□ -1.53
SKP1-212ENST00000523966 SOX5P35711 763 aa5.51□□□□□ -1.53
SKP1-212ENST00000523966 ANAPC15P60006 121 aa5.51□□□□□ -1.53
SKP1-212ENST00000523966 ST5P78524 1137 aa5.51□□□□□ -1.53
SKP1-212ENST00000523966 INF2Q27J81 1249 aa5.51□□□□□ -1.53
SKP1-212ENST00000523966 TM4SF20Q53R12 229 aa5.51□□□□□ -1.53
SKP1-212ENST00000523966 FAM47CQ5HY64 1035 aa5.51□□□□□ -1.53
SKP1-212ENST00000523966 EP400NLQ6ZTU2 488 aa5.51□□□□□ -1.53
SKP1-212ENST00000523966 CEP68Q76N32 757 aa5.51□□□□□ -1.53
SKP1-212ENST00000523966 DDX53Q86TM3 631 aaKnown RBP5.51□□□□□ -1.53
SKP1-212ENST00000523966 LRRTM3Q86VH5 581 aa5.51□□□□□ -1.53
SKP1-212ENST00000523966 CCDC103Q8IW40 242 aa5.51□□□□□ -1.53
SKP1-212ENST00000523966 PPM1KQ8N3J5 372 aa5.51□□□□□ -1.53
SKP1-212ENST00000523966 TMEM52Q8NDY8 209 aa5.51□□□□□ -1.53
SKP1-212ENST00000523966 PANK1Q8TE04 598 aa5.51□□□□□ -1.53
SKP1-212ENST00000523966 LINC01599Q8WXQ3 324 aa5.51□□□□□ -1.53
SKP1-212ENST00000523966 TRMT2BQ96GJ1 504 aaKnown RBP5.51□□□□□ -1.53
SKP1-212ENST00000523966 TMEM169Q96HH4 297 aa5.51□□□□□ -1.53
SKP1-212ENST00000523966 HHIPL1Q96JK4 782 aa5.51□□□□□ -1.53
SKP1-212ENST00000523966 PAK6Q9NQU5 681 aaPredicted RBP5.51□□□□□ -1.53
SKP1-212ENST00000523966 CLDND1Q9NY35 253 aa5.51□□□□□ -1.53
SKP1-212ENST00000523966 ZNF281Q9Y2X9 895 aa5.51□□□□□ -1.53
SKP1-212ENST00000523966 PCDHA8Q9Y5H6 950 aa5.51□□□□□ -1.53
SKP1-212ENST00000523966 ASXL2Q76L83 1435 aa5.5□□□□□ -1.53
SKP1-212ENST00000523966 PPM1GO15355 546 aaPredicted RBP5.5□□□□□ -1.53
SKP1-212ENST00000523966 PDE8AO60658 829 aa5.5□□□□□ -1.53
SKP1-212ENST00000523966 RASGRP1O95267 797 aa5.5□□□□□ -1.53
SKP1-212ENST00000523966 CPEP16870 476 aa5.5□□□□□ -1.53
SKP1-212ENST00000523966 SDSP20132 328 aa5.5□□□□□ -1.53
SKP1-212ENST00000523966 GDNFP39905 211 aa5.5□□□□□ -1.53
SKP1-212ENST00000523966 ARL4AP40617 200 aa5.5□□□□□ -1.53
SKP1-212ENST00000523966 BCL6P41182 706 aa5.5□□□□□ -1.53
SKP1-212ENST00000523966 IGBP1P78318 339 aa5.5□□□□□ -1.53
SKP1-212ENST00000523966 LRP8Q14114 963 aa5.5□□□□□ -1.53
SKP1-212ENST00000523966 CFAP100Q494V2 611 aa5.5□□□□□ -1.53
SKP1-212ENST00000523966 SLCO6A1Q86UG4 719 aa5.5□□□□□ -1.53
SKP1-212ENST00000523966 CABP7Q86V35 215 aa5.5□□□□□ -1.53
SKP1-212ENST00000523966 ANKRD13AQ8IZ07 590 aa5.5□□□□□ -1.53
SKP1-212ENST00000523966 LZTR1Q8N653 840 aa5.5□□□□□ -1.53
SKP1-212ENST00000523966 NUP43Q8NFH3 380 aa5.5□□□□□ -1.53
SKP1-212ENST00000523966 PUS7Q96PZ0 661 aaKnown RBP5.5□□□□□ -1.53
SKP1-212ENST00000523966 CAAP1Q9H8G2 361 aa5.5□□□□□ -1.53
SKP1-212ENST00000523966 TRIM39Q9HCM9 518 aa5.5□□□□□ -1.53
SKP1-212ENST00000523966 MARCH2Q9P0N8 246 aa5.5□□□□□ -1.53
SKP1-212ENST00000523966 TNPO3Q9Y5L0 923 aaKnown RBP5.5□□□□□ -1.53
SKP1-212ENST00000523966 H7BY64 318 aa5.49□□□□□ -1.53
SKP1-212ENST00000523966 DNAJC8O75937 253 aaPredicted RBP5.49□□□□□ -1.53
SKP1-212ENST00000523966 NPTXRO95502 500 aa5.49□□□□□ -1.53
SKP1-212ENST00000523966 FUCA1P04066 466 aa5.49□□□□□ -1.53
SKP1-212ENST00000523966 SOD2P04179 222 aa5.49□□□□□ -1.53
SKP1-212ENST00000523966 JMJD7P0C870 316 aa5.49□□□□□ -1.53
SKP1-212ENST00000523966 GRK2P25098 689 aa5.49□□□□□ -1.53
SKP1-212ENST00000523966 GRK3P35626 688 aa5.49□□□□□ -1.53
SKP1-212ENST00000523966 AFMP43652 599 aa5.49□□□□□ -1.53
SKP1-212ENST00000523966 CORO7P57737 925 aa5.49□□□□□ -1.53
SKP1-212ENST00000523966 SART3Q15020 963 aaKnown RBP5.49□□□□□ -1.53
SKP1-212ENST00000523966 HSF5Q4G112 596 aaPredicted RBP5.49□□□□□ -1.53
SKP1-212ENST00000523966 DDX46Q7L014 1031 aaKnown RBP5.49□□□□□ -1.53
SKP1-212ENST00000523966 FGD2Q7Z6J4 655 aa5.49□□□□□ -1.53
SKP1-212ENST00000523966 LILRA2Q8N149 483 aa5.49□□□□□ -1.53
SKP1-212ENST00000523966 NLGN2Q8NFZ4 835 aa5.49□□□□□ -1.53
SKP1-212ENST00000523966 MYLIPQ8WY64 445 aa5.49□□□□□ -1.53
SKP1-212ENST00000523966 DDX1Q92499 740 aaKnown RBP5.49□□□□□ -1.53
SKP1-212ENST00000523966 FBXW5Q969U6 566 aa5.49□□□□□ -1.53
SKP1-212ENST00000523966 ASIC4Q96FT7 647 aa5.49□□□□□ -1.53
SKP1-212ENST00000523966 WNK4Q96J92 1243 aa5.49□□□□□ -1.53
SKP1-212ENST00000523966 JMJD8Q96S16 334 aa5.49□□□□□ -1.53
SKP1-212ENST00000523966 G6PC3Q9BUM1 346 aa5.49□□□□□ -1.53
SKP1-212ENST00000523966 RC3H2Q9HBD1 1191 aaKnown RBP5.49□□□□□ -1.53
SKP1-212ENST00000523966 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.49□□□□□ -1.53
SKP1-212ENST00000523966 GULP1Q9UBP9 304 aa5.49□□□□□ -1.53
SKP1-212ENST00000523966 GPR160Q9UJ42 338 aa5.49□□□□□ -1.53
SKP1-212ENST00000523966 MAPRE3Q9UPY8 281 aa5.49□□□□□ -1.53
SKP1-212ENST00000523966 COL4A3BPQ9Y5P4 624 aa5.49□□□□□ -1.53
SKP1-212ENST00000523966 TCRBV16S1A1N1A0A5B0 115 aa5.48□□□□□ -1.53
SKP1-212ENST00000523966 C22orf46C9J442 243 aa5.48□□□□□ -1.53
SKP1-212ENST00000523966 HYAL3O43820 417 aaPredicted RBP5.48□□□□□ -1.53
SKP1-212ENST00000523966 NRDCO43847 1150 aa5.48□□□□□ -1.53
SKP1-212ENST00000523966 MSCO60682 206 aa5.48□□□□□ -1.53
SKP1-212ENST00000523966 DGKIO75912 1065 aa5.48□□□□□ -1.53
SKP1-212ENST00000523966 PRKCAP17252 672 aa5.48□□□□□ -1.53
SKP1-212ENST00000523966 ITGB7P26010 798 aa5.48□□□□□ -1.53
SKP1-212ENST00000523966 DNM2P50570 870 aa5.48□□□□□ -1.53
SKP1-212ENST00000523966 CYP4F8P98187 520 aa5.48□□□□□ -1.53
SKP1-212ENST00000523966 SPIRE1Q08AE8 756 aa5.48□□□□□ -1.53
SKP1-212ENST00000523966 SNX17Q15036 470 aa5.48□□□□□ -1.53
SKP1-212ENST00000523966 WWC2Q6AWC2 1192 aa5.48□□□□□ -1.53
SKP1-212ENST00000523966 KRT26Q7Z3Y9 468 aa5.48□□□□□ -1.53
SKP1-212ENST00000523966 LEO1Q8WVC0 666 aaPredicted RBP5.48□□□□□ -1.53
SKP1-212ENST00000523966 SCLYQ96I15 445 aa5.48□□□□□ -1.53
SKP1-212ENST00000523966 KCNJ15Q99712 375 aa5.48□□□□□ -1.53
SKP1-212ENST00000523966 CABP5Q9NP86 173 aa5.48□□□□□ -1.53
SKP1-212ENST00000523966 PDLIM7Q9NR12 457 aa5.48□□□□□ -1.53
SKP1-212ENST00000523966 CATSPERZQ9NTU4 200 aa5.48□□□□□ -1.53
SKP1-212ENST00000523966 IMPACTQ9P2X3 320 aa5.48□□□□□ -1.53
SKP1-212ENST00000523966 RWDD3Q9Y3V2 267 aa5.48□□□□□ -1.53
SKP1-212ENST00000523966 NUB1Q9Y5A7 615 aa5.48□□□□□ -1.53
SKP1-212ENST00000523966 ARVCFO00192 962 aa5.47□□□□□ -1.53
SKP1-212ENST00000523966 ARNTLO00327 626 aa5.47□□□□□ -1.53
SKP1-212ENST00000523966 KPNA6O60684 536 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms