RNA–Protein interactions for RNA: ENST00000518040.5

SH2D4A-202, Transcript of SH2 domain containing 4A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SH2D4A, Length 1,697 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-202ENST00000518040 FBXO22Q8NEZ5 403 aa11.74□□□□□ -0.53
SH2D4A-202ENST00000518040 FRAT1Q92837 279 aaPredicted RBP11.74□□□□□ -0.53
SH2D4A-202ENST00000518040 PABPC5Q96DU9 382 aaKnown RBP11.74□□□□□ -0.53
SH2D4A-202ENST00000518040 WDR11Q9BZH6 1224 aa11.74□□□□□ -0.53
SH2D4A-202ENST00000518040 IRF2BPLQ9H1B7 796 aa11.74□□□□□ -0.53
SH2D4A-202ENST00000518040 MTUS1Q9ULD2 1270 aa11.74□□□□□ -0.53
SH2D4A-202ENST00000518040 SIP14410 1827 aa11.73□□□□□ -0.53
SH2D4A-202ENST00000518040 TTLL1O95922 423 aa11.73□□□□□ -0.53
SH2D4A-202ENST00000518040 RASA1P20936 1047 aa11.73□□□□□ -0.53
SH2D4A-202ENST00000518040 UBE3CQ15386 1083 aa11.73□□□□□ -0.53
SH2D4A-202ENST00000518040 SBK1Q52WX2 424 aa11.73□□□□□ -0.53
SH2D4A-202ENST00000518040 OR6J1Q8NGC5 347 aa11.73□□□□□ -0.53
SH2D4A-202ENST00000518040 CLUAP1Q96AJ1 413 aa11.73□□□□□ -0.53
SH2D4A-202ENST00000518040 MPHOSPH6Q99547 160 aaKnown RBP11.73□□□□□ -0.53
SH2D4A-202ENST00000518040 CYP39A1Q9NYL5 469 aa11.73□□□□□ -0.53
SH2D4A-202ENST00000518040 INSL6Q9Y581 213 aa11.73□□□□□ -0.53
SH2D4A-202ENST00000518040 SCN10AQ9Y5Y9 1956 aa11.73□□□□□ -0.53
SH2D4A-202ENST00000518040 WDFY4Q6ZS81 3184 aa11.73□□□□□ -0.53
SH2D4A-202ENST00000518040 RBM47A0AV96 593 aaKnown RBP11.72□□□□□ -0.53
SH2D4A-202ENST00000518040 PLA2G6O60733 806 aa11.72□□□□□ -0.53
SH2D4A-202ENST00000518040 ALAS1P13196 640 aa11.72□□□□□ -0.53
SH2D4A-202ENST00000518040 SELPP16109 830 aa11.72□□□□□ -0.53
SH2D4A-202ENST00000518040 IKBKEQ14164 716 aa11.72□□□□□ -0.53
SH2D4A-202ENST00000518040 HERC4Q5GLZ8 1057 aaPredicted RBP11.72□□□□□ -0.53
SH2D4A-202ENST00000518040 ZSCAN25Q6NSZ9 544 aa11.72□□□□□ -0.53
SH2D4A-202ENST00000518040 GIMAP6Q6P9H5 292 aa11.72□□□□□ -0.53
SH2D4A-202ENST00000518040 ZNF444Q8N0Y2 327 aaPredicted RBP11.72□□□□□ -0.53
SH2D4A-202ENST00000518040 CLASRPQ8N2M8 674 aaKnown RBP11.72□□□□□ -0.53
SH2D4A-202ENST00000518040 TMEM57Q8N5G2 664 aa11.72□□□□□ -0.53
SH2D4A-202ENST00000518040 OCEL1Q9H607 264 aa11.72□□□□□ -0.53
SH2D4A-202ENST00000518040 PAG1Q9NWQ8 432 aa11.72□□□□□ -0.53
SH2D4A-202ENST00000518040 IGKV6D-41A0A0C4DH26 115 aa11.71□□□□□ -0.53
SH2D4A-202ENST00000518040 A6NJR5 290 aa11.71□□□□□ -0.53
SH2D4A-202ENST00000518040 TMEM232C9JQI7 657 aa11.71□□□□□ -0.53
SH2D4A-202ENST00000518040 H3BQ06 376 aaPredicted RBP11.71□□□□□ -0.53
SH2D4A-202ENST00000518040 CXCL10P02778 98 aa11.71□□□□□ -0.53
SH2D4A-202ENST00000518040 RBL2Q08999 1139 aa11.71□□□□□ -0.53
SH2D4A-202ENST00000518040 IKQ13123 557 aaPredicted RBP11.71□□□□□ -0.53
SH2D4A-202ENST00000518040 PTGISQ16647 500 aa11.71□□□□□ -0.53
SH2D4A-202ENST00000518040 PPP4R3BQ5MIZ7 849 aa11.71□□□□□ -0.53
SH2D4A-202ENST00000518040 SLFN13Q68D06 897 aa11.71□□□□□ -0.53
SH2D4A-202ENST00000518040 POTEGQ6S5H5 508 aa11.71□□□□□ -0.53
SH2D4A-202ENST00000518040 LRRC8DQ7L1W4 858 aa11.71□□□□□ -0.53
SH2D4A-202ENST00000518040 LRRC47Q8N1G4 583 aaKnown RBP11.71□□□□□ -0.53
SH2D4A-202ENST00000518040 BANK1Q8NDB2 785 aa11.71□□□□□ -0.53
SH2D4A-202ENST00000518040 STAG1Q8WVM7 1258 aa11.71□□□□□ -0.53
SH2D4A-202ENST00000518040 MTMR4Q9NYA4 1195 aa11.71□□□□□ -0.53
SH2D4A-202ENST00000518040 PTPRSQ13332 1948 aa11.71□□□□□ -0.53
SH2D4A-202ENST00000518040 IFIT2P09913 472 aaKnown RBP11.71□□□□□ -0.54
SH2D4A-202ENST00000518040 PTGS1P23219 599 aa11.71□□□□□ -0.54
SH2D4A-202ENST00000518040 DEFB103AP81534 67 aa11.71□□□□□ -0.54
SH2D4A-202ENST00000518040 COL19A1Q14993 1142 aa11.71□□□□□ -0.54
SH2D4A-202ENST00000518040 PPP2R5BQ15173 497 aa11.71□□□□□ -0.54
SH2D4A-202ENST00000518040 ZKSCAN2Q63HK3 967 aa11.71□□□□□ -0.54
SH2D4A-202ENST00000518040 SESTD1Q86VW0 696 aa11.71□□□□□ -0.54
SH2D4A-202ENST00000518040 MYH4Q9Y623 1939 aa11.71□□□□□ -0.54
SH2D4A-202ENST00000518040 TET1Q8NFU7 2136 aa11.71□□□□□ -0.54
SH2D4A-202ENST00000518040 ZNF316A6NFI3 1004 aaPredicted RBP11.7□□□□□ -0.54
SH2D4A-202ENST00000518040 IRS1P35568 1242 aa11.7□□□□□ -0.54
SH2D4A-202ENST00000518040 TMEM63BQ5T3F8 832 aa11.7□□□□□ -0.54
SH2D4A-202ENST00000518040 NSMFQ6X4W1 530 aa11.7□□□□□ -0.54
SH2D4A-202ENST00000518040 SUGP1Q8IWZ8 645 aaKnown RBP11.7□□□□□ -0.54
SH2D4A-202ENST00000518040 PRSS33Q8NF86 280 aa11.7□□□□□ -0.54
SH2D4A-202ENST00000518040 RHPN1Q8TCX5 695 aa11.7□□□□□ -0.54
SH2D4A-202ENST00000518040 SCFD2Q8WU76 684 aa11.7□□□□□ -0.54
SH2D4A-202ENST00000518040 EDAQ92838 391 aa11.7□□□□□ -0.54
SH2D4A-202ENST00000518040 CEP95Q96GE4 821 aa11.7□□□□□ -0.54
SH2D4A-202ENST00000518040 GMCL1Q96IK5 515 aa11.7□□□□□ -0.54
SH2D4A-202ENST00000518040 NSUN3Q9H649 340 aaKnown RBP11.7□□□□□ -0.54
SH2D4A-202ENST00000518040 C1orf115Q9H7X2 142 aa11.7□□□□□ -0.54
SH2D4A-202ENST00000518040 ISY1Q9ULR0 285 aaKnown RBP11.7□□□□□ -0.54
SH2D4A-202ENST00000518040 CIZ1Q9ULV3 898 aaPredicted RBP11.7□□□□□ -0.54
SH2D4A-202ENST00000518040 EXOC6BQ9Y2D4 811 aa11.7□□□□□ -0.54
SH2D4A-202ENST00000518040 B4DLN1 442 aa11.69□□□□□ -0.54
SH2D4A-202ENST00000518040 SLC1A4P43007 532 aa11.69□□□□□ -0.54
SH2D4A-202ENST00000518040 ALDH5A1P51649 535 aaPredicted RBP11.69□□□□□ -0.54
SH2D4A-202ENST00000518040 MRPL12P52815 198 aaKnown RBP11.69□□□□□ -0.54
SH2D4A-202ENST00000518040 SMAD2Q15796 467 aaKnown RBP11.69□□□□□ -0.54
SH2D4A-202ENST00000518040 TMCO2Q7Z6W1 182 aaPredicted RBP11.69□□□□□ -0.54
SH2D4A-202ENST00000518040 KIF1BPQ96EK5 621 aa11.69□□□□□ -0.54
SH2D4A-202ENST00000518040 PHOX2BQ99453 314 aa11.69□□□□□ -0.54
SH2D4A-202ENST00000518040 IL1RAPL2Q9NP60 686 aa11.69□□□□□ -0.54
SH2D4A-202ENST00000518040 TNNQ9UQP3 1299 aa11.69□□□□□ -0.54
SH2D4A-202ENST00000518040 H3BNC9 293 aa11.68□□□□□ -0.54
SH2D4A-202ENST00000518040 GFRA3O60609 400 aa11.68□□□□□ -0.54
SH2D4A-202ENST00000518040 AMHP03971 560 aa11.68□□□□□ -0.54
SH2D4A-202ENST00000518040 GPNMBQ14956 572 aa11.68□□□□□ -0.54
SH2D4A-202ENST00000518040 LCE2DQ5TA82 110 aaPredicted RBP11.68□□□□□ -0.54
SH2D4A-202ENST00000518040 EP400NLQ6ZTU2 488 aa11.68□□□□□ -0.54
SH2D4A-202ENST00000518040 C17orf80Q9BSJ5 609 aa11.68□□□□□ -0.54
SH2D4A-202ENST00000518040 PNMA2Q9UL42 364 aa11.68□□□□□ -0.54
SH2D4A-202ENST00000518040 CCPG1Q9ULG6 757 aa11.68□□□□□ -0.54
SH2D4A-202ENST00000518040 PLIN4Q96Q06 1357 aa11.68□□□□□ -0.54
SH2D4A-202ENST00000518040 MINDY4BA8MYZ0 360 aa11.68□□□□□ -0.54
SH2D4A-202ENST00000518040 ICAM1P05362 532 aa11.68□□□□□ -0.54
SH2D4A-202ENST00000518040 PSEN1P49768 467 aa11.68□□□□□ -0.54
SH2D4A-202ENST00000518040 HTRA4P83105 476 aaPredicted RBP11.68□□□□□ -0.54
SH2D4A-202ENST00000518040 PDE4DQ08499 809 aa11.68□□□□□ -0.54
SH2D4A-202ENST00000518040 EPC2Q52LR7 807 aa11.68□□□□□ -0.54
SH2D4A-202ENST00000518040 TCEAL5Q5H9L2 206 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms